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Report for CCDS14744.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14744.2 Public Homo sapiens X TEX28 24 110 108 CCDS HistoryNCBI Gene:1527Re-query CCDS DB by CCDS ID:14744.2See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 14744.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000619903.4 ENSP00000478834.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000619903.4Link to Ensembl Protein Viewer:ENSP00000478834.1Re-query CCDS DB by Nucleotide ID:ENST00000619903Re-query CCDS DB by Protein ID:ENSP00000478834
Original member Current member EBI ENST00000610938.1 ENSP00000479148.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000610938.1Link to Ensembl Protein Viewer:ENSP00000479148.1Re-query CCDS DB by Nucleotide ID:ENST00000610938Re-query CCDS DB by Protein ID:ENSP00000479148
Original member Current member EBI ENST00000617225.5 ENSP00000482010.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000617225.5Link to Ensembl Protein Viewer:ENSP00000482010.1Re-query CCDS DB by Nucleotide ID:ENST00000617225Re-query CCDS DB by Protein ID:ENSP00000482010
Original member Current member NCBI NM_001205201.2 NP_001192130.1 Accepted alive Link to Nucleotide Sequence:NM_001205201.2Link to Protein Sequence:NP_001192130.1Re-query CCDS DB by Nucleotide ID:NM_001205201Re-query CCDS DB by Protein ID:NP_001192130Link to BLAST:NP_001192130.1
Original member Current member NCBI NM_001586.3 NP_001577.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001586.3Link to Protein Sequence:NP_001577.1Re-query CCDS DB by Nucleotide ID:NM_001586Re-query CCDS DB by Protein ID:NP_001577Link to BLAST:NP_001577.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001192130.1 410 O15482 410 100% 0 0
NP_001577.1 410 O15482 410 100% 0 0

Chromosomal Locations for CCDS 14744.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 154271415 154271771 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 154272391 154272526 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 154287680 154288407 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 154292106 154292117 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1233 nt):
ATGGTTTTAAAGGCGGAACACACCAGGAGCCCCAGCGCAACCCTCCCCTCCAATGTGCCTTCATGCCGGT
CCCTGTCATCCAGCGAAGACGGCCCCAGTGGCCCTTCCAGCCTCGCAGATGGAGGCCTAGCCCACAACTT
ACAGGATAGTGTCAGGCACCGCATCCTCTACCTCTCAGAGCAGCTGAGAGTGGAGAAGGCCAGTCGGGAT
GGCAACACTGTGAGCTACCTCAAGCTGGTATCCAAAGCAGACCGGCACCAGGTGCCGCACATCCAGCAGG
CCTTTGAGAAGGTGAACCAGCGCGCCTCTGCCACCATCGCCCAGATCGAGCACAGGCTCCACCAGTGTCA
CCAGCAGCTCCAGGAGCTGGAGGAAGGCTGCAGGCCCGAGGGCTTACTGCTGATGGCAGAAAGCGACCCA
GCCAACTGCGAGCCACCCAGTGAGAAGGCCCTGCTTTCAGAGCCCCCCGAGCCAGGTGGGGAAGACGGGC
CGGTCAACCTGCCTCATGCCAGCAGGCCCTTCATCTTGGAGAGTCGCTTCCAGAGCTTACAGCAGGGGAC
GTGCTTAGAGACAGAGGATGTGGCCCAGCAACAAAACCTGCTGTTGCAGAAGGTAAAGGCAGAGCTGGAA
GAAGCCAAGAGGTTCCACATCAGCCTCCAGGAGTCCTATCACAGCCTAAAGGAGAGGTCTCTGACTGACC
TGCAGCTGTTGCTGGAGTCCCTTCAGGAGGAGAAGTGTAGGCAAGCATTGATGGAAGAACAGGTGAATGG
TCGCCTGCAGGGACAGCTGAATGAGATTTACAACCTCAAACACAATCTGGCCTGCAGCGAAGAGAGAATG
GCCTATCTATCCTATGAGAGAGCCAAGGAAATATGGGAGATCACGGAGACCTTCAAGAGCCGAATATCCA
AGCTGGAGATGCTACAGCAAGTCACCCAACTGGAGGCAGCGGAGCACCTCCAAAGCCGTCCCCCGCAGAT
GTTGTTCAAGTTCCTGAGTCCGCGCCTCTCACTGGCAACCGTCCTCTTGGTCTTTGTCTCCACCTTGTGT
GCCTGCCCCTCGTCACTGATCAGCTCACGCCTGTGCACCTGCACCATGCTGATGCTGATCGGGCTTGGGG
TCCTGGCCTGGCAGAGGTGGCGCGCCATCCCTGCCACAGACTGGCAGGAATGGGTCCCCTCCAGGTGTAG
ACTGTACTCCAAGGACTCTGGGCCTCCAGCAGATGGACCTTAA

Translation (410 aa):
MVLKAEHTRSPSATLPSNVPSCRSLSSSEDGPSGPSSLADGGLAHNLQDSVRHRILYLSEQLRVEKASRD
GNTVSYLKLVSKADRHQVPHIQQAFEKVNQRASATIAQIEHRLHQCHQQLQELEEGCRPEGLLLMAESDP
ANCEPPSEKALLSEPPEPGGEDGPVNLPHASRPFILESRFQSLQQGTCLETEDVAQQQNLLLQKVKAELE
EAKRFHISLQESYHSLKERSLTDLQLLLESLQEEKCRQALMEEQVNGRLQGQLNEIYNLKHNLACSEERM
AYLSYERAKEIWEITETFKSRISKLEMLQQVTQLEAAEHLQSRPPQMLFKFLSPRLSLATVLLVFVSTLC
ACPSSLISSRLCTCTMLMLIGLGVLAWQRWRAIPATDWQEWVPSRCRLYSKDSGPPADGP


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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