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Report for CCDS9857.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9857.1 Public Homo sapiens 14 POMT2 24 110 108 CCDS HistoryNCBI Gene:29954Re-query CCDS DB by CCDS ID:9857.1See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9857.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000261534.9 ENSP00000261534.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000261534.9Link to Ensembl Protein Viewer:ENSP00000261534.4Re-query CCDS DB by Nucleotide ID:ENST00000261534Re-query CCDS DB by Protein ID:ENSP00000261534
Original member Current member NCBI NM_013382.7 NP_037514.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_013382.7Link to Protein Sequence:NP_037514.2Re-query CCDS DB by Nucleotide ID:NM_013382Re-query CCDS DB by Protein ID:NP_037514Link to BLAST:NP_037514.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_037514.2 750 Q9UKY4-1 750 100% 0 0

Chromosomal Locations for CCDS 9857.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 77277376 77277481 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 77278394 77278508 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 77278729 77278869 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 77279823 77279928 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 77280021 77280080 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 77280392 77280463 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 77283797 77283873 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 77284950 77285041 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 77285481 77285632 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 77286744 77286822 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 77288762 77288831 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 77291314 77291380 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 77296164 77296273 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 77298689 77298771 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 77299455 77299561 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 77301090 77301249 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 77302835 77302943 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 77304692 77304800 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 77306337 77306441 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 77311949 77312033 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 77320434 77320681 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2253 nt):
ATGCCGCCGGCCACGGGCGGAGGCCTGGCAGAGTCCGAGCTGCGTCCCCGGAGGGGCCGCTGTGGCCCCC
AGGCTGCTAGGGCCGCAGGCCGGGACGTGGCCGCTGAGGCTGTGGCGCGAAGCCCCAAACGGCCTGCTTG
GGGCTCACGGCGCTTCGAGGCGGTCGGCTGGTGGGCCCTGCTGGCCTTGGTGACGCTGCTGTCCTTCGCC
ACCCGCTTCCACCGCTTGGACGAGCCGCCGCACATCTGTTGGGATGAGACTCACTTTGGAAAAATGGGAA
GTTACTATATCAACCGTACATTTTTCTTTGATGTGCACCCGCCCCTGGGAAAGATGCTGATAGGTCTTGC
TGGCTACCTGAGTGGATATGATGGTACCTTTTTGTTCCAGAAGCCTGGGGATAAATATGAGCATCACAGC
TACATGGGAATGAGAGGATTCTGTGCATTCCTTGGCTCCTGGCTGGTCCCCTTTGCCTACCTCACTGTAC
TGGATCTGTCCAAGTCCCTCTCGGCAGCACTGCTCACAGCTGCCCTCCTCACCTTTGACACGGGATGCCT
CACTCTGTCCCAGTACATCCTCCTTGACCCCATCCTGATGTTCTTCATCATGGCTGCCATGCTGAGCATG
GTCAAGTACAACTCTTGCGCCGACAGGCCCTTCTCTGCCCCCTGGTGGTTCTGGCTCAGCCTGACTGGCG
TTAGTCTTGCTGGTGCTTTAGGGGTCAAGTTTGTTGGCCTCTTTATCATCCTTCAAGTGGGGCTGAACAC
CATTGCAGACCTTTGGTACCTGTTCGGAGACCTCAGTCTTTCATTGGTGACTGTGGGAAAACACCTGACT
GCTCGTGTCCTGTGCCTCATAGTGCTGCCCCTGGCTCTCTATACAGCCACCTTTGCTGTTCACTTCATGG
TGCTGAGTAAAAGTGGCCCTGGTGACGGTTTCTTCAGTTCTGCCTTCCAGGCCCGGCTTTCAGGGAACAA
CCTGCACAATGCTTCCATCCCTGAACACCTGGCCTACGGCTCTGTGATCACTGTGAAGAACCTCCGGATG
GCCATCGGCTATCTGCACTCCCACAGGCACCTCTACCCCGAGGGCATTGGTGCCCGTCAGCAGCAGGTCA
CCACCTATTTGCACAAGGACTACAACAACCTGTGGATTATCAAGAAACATAACACAAACTCAGATCCCCT
AGACCCTTCCTTCCCAGTGGAGTTTGTAAGACATGGAGACATTATTCGACTAGAACACAAAGAAACTTCC
CGGAACTTGCACAGTCACTATCATGAGGCCCCCATGACCCGGAAGCACTATCAGGTCACCGGCTATGGCA
TAAATGGAACAGGGGACTCAAATGATTTCTGGCGGATTGAGGTCGTAAACAGGAAATTTGGAAACCGGAT
CAAAGTGCTGAGAAGTCGAATTCGCTTCATCCATTTGGTCACAGGTTGTGTCCTGGGCTCCTCGGGAAAG
GTTCTGCCCAAGTGGGGCTGGGAGCAGTTGGAAGTTACTTGCACCCCATACCTGAAAGAAACCCTCAACT
CCATCTGGAATGTGGAGGACCATATCAATCCCAAGTTGCCAAACATCAGCCTGGATGTGCTACAGCCCAG
TTTTCCTGAGATCTTGCTGGAATCCCACATGGTCATGATCCGGGGGAACAGTGGCCTCAAACCCAAGGAC
AATGAGTTCACGTCCAAACCCTGGCACTGGCCTATCAACTATCAGGGCCTACGCTTCTCAGGGGTCAATG
ACACAGATTTCCGAGTCTATCTGCTTGGCAACCCGGTGGTTTGGTGGCTGAATCTGTTGAGCATCGCCCT
CTACCTCCTCTCAGGGAGCATCATTGCTGTAGCCATGCAGAGAGGGGCACGGCTGCCAGCGGAGGTTGCA
GGGTTGTCCCAGGTCCTGCTTCGAGGAGGCGGCCAGGTCCTGCTCGGCTGGACACTCCATTACTTCCCGT
TTTTCCTGATGGGCCGGGTCCTCTACTTCCACCACTACTTCCCAGCCATGCTCTTCTCAAGCATGTTGAC
AGGCATTCTGTGGGACACCCTCCTGCGGCTCTGTGCCTGGGGCTTGGCCTCATGGCCCCTGGCGAGGGGC
ATACATGTGGCGGGAATCCTGAGCCTGCTCCTGGGAACTGCCTACAGCTTCTACCTCTTCCACCCTCTGG
CTTACGGGATGGTTGGTCCCCTGGCCCAGGACCCCCAAAGTCCAATGGCAGGACTAAGGTGGCTGGACTC
ATGGGACTTTTGA

Translation (750 aa):
MPPATGGGLAESELRPRRGRCGPQAARAAGRDVAAEAVARSPKRPAWGSRRFEAVGWWALLALVTLLSFA
TRFHRLDEPPHICWDETHFGKMGSYYINRTFFFDVHPPLGKMLIGLAGYLSGYDGTFLFQKPGDKYEHHS
YMGMRGFCAFLGSWLVPFAYLTVLDLSKSLSAALLTAALLTFDTGCLTLSQYILLDPILMFFIMAAMLSM
VKYNSCADRPFSAPWWFWLSLTGVSLAGALGVKFVGLFIILQVGLNTIADLWYLFGDLSLSLVTVGKHLT
ARVLCLIVLPLALYTATFAVHFMVLSKSGPGDGFFSSAFQARLSGNNLHNASIPEHLAYGSVITVKNLRM
AIGYLHSHRHLYPEGIGARQQQVTTYLHKDYNNLWIIKKHNTNSDPLDPSFPVEFVRHGDIIRLEHKETS
RNLHSHYHEAPMTRKHYQVTGYGINGTGDSNDFWRIEVVNRKFGNRIKVLRSRIRFIHLVTGCVLGSSGK
VLPKWGWEQLEVTCTPYLKETLNSIWNVEDHINPKLPNISLDVLQPSFPEILLESHMVMIRGNSGLKPKD
NEFTSKPWHWPINYQGLRFSGVNDTDFRVYLLGNPVVWWLNLLSIALYLLSGSIIAVAMQRGARLPAEVA
GLSQVLLRGGGQVLLGWTLHYFPFFLMGRVLYFHHYFPAMLFSSMLTGILWDTLLRLCAWGLASWPLARG
IHVAGILSLLLGTAYSFYLFHPLAYGMVGPLAQDPQSPMAGLRWLDSWDF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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