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Report for CCDS31616.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31616.2 Public Homo sapiens 11 ANKRD13D 24 110 108 CCDS HistoryNCBI Gene:338692Re-query CCDS DB by CCDS ID:31616.2See the combined annotation on chromosome 11 in Sequence Viewer

Public Note for CCDS 31616.1
The coding region has been updated to extend the N-terminus to one that is more supported by the available transcript and conservation data.

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 31616.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000511455.7 ENSP00000427130.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000511455.7Link to Ensembl Protein Viewer:ENSP00000427130.2Re-query CCDS DB by Nucleotide ID:ENST00000511455Re-query CCDS DB by Protein ID:ENSP00000427130
Original member Current member NCBI NM_207354.3 NP_997237.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_207354.3Link to Protein Sequence:NP_997237.2Re-query CCDS DB by Nucleotide ID:NM_207354Re-query CCDS DB by Protein ID:NP_997237Link to BLAST:NP_997237.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_997237.2 605 Q6ZTN6-3 605 100% 0 0

Chromosomal Locations for CCDS 31616.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 67289461 67289550 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67290078 67290213 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67290322 67290446 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67291476 67291521 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67291603 67291746 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67291991 67292180 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67299058 67299124 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67299530 67299611 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67299827 67299888 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67299993 67300123 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67300990 67301147 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67301282 67301398 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67301488 67301651 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67301732 67301823 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 67302119 67302332 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1818 nt):
ATGGCCGGCCCGGGCCCCACCTTCCCGCTGCACCGGCTCGTCTGGGCGAACCGGCATCGCGAACTGGAGG
CCGCACTGCACAGCCACCAGCACGACATTGAACAGGAGGACCCCCGCGGGCGGACCCCACTGGAGCTGGC
CGTGTCTCTGGGAAACCTGGAGTCTGTGAGAGTGCTCCTTCGACACAATGCCAACGTGGGCAAAGAGAAC
CGCCAGGGCTGGGCAGTCCTGCAGGAGGCAGTCAGCACTGGAGACCCCGAGATGGTGCAGCTGGTGCTCC
AGTATCGGGACTACCAGAGGGCCACGCAGAGGCTGGCGGGCATTCCGGAACTGCTCAACAAACTTCGCCA
GGCCCCCGATTTCTACGTTGAGATGAAGTGGGAGTTCACCAGCTGGGTGCCCCTTGTGTCTAAGATGTGC
CCAAGCGATGTGTACCGCGTGTGGAAGCGGGGTGAGAGCCTGCGAGTAGACACCAGTCTCCTGGGCTTCG
AGCACATGACCTGGCAGCGGGGCCGGAGGAGCTTCATCTTCAAGGGCCAGGAGGCAGGAGCCCTGGTGAT
GGAAGTGGACCATGACCGGCAGGTGGTGCATGTGGAGACACTGGGGCTCACTCTGCAGGAGCCCGAAACA
CTGCTGGCCGCCATGCGGCCCAGCGAGGAGCATGTGGCCAGTCGCCTCACCTCTCCTATCGTCTCCACCC
ACCTGGACACTCGTAATGTGGCCTTTGAGAGGAACAAATGTGGTATCTGGGGCTGGCGGTCTGAGAAGAT
GGAAACTGTTAGCGGCTACGAGGCCAAGGTGTACAGTGCCACCAACGTGGAGCTGGTGACACGCACACGC
ACGGAGCACCTCTCTGATCAGGACAAGTCGAGGAGCAAAGCGGGGAAGACTCCATTCCAGTCCTTCCTGG
GGATGGCGCAGCAGCATTCCTCCCACACCGGGGCCCCCGTGCAGCAGGCAGCCAGCCCCACCAACCCCAC
AGCCATCTCCCCTGAGGAGTACTTCGACCCCAACTTCAGCCTGGAGTCACGGAACATTGGCCGCCCCATC
GAGATGTCCAGCAAAGTACAGAGGTTCAAGGCAACACTGTGGCTGAGTGAAGAGCACCCGCTCTCCCTGG
GTGACCAGGTGACCCCCATCATCGACCTAATGGCCATCAGCAACGCTCACTTTGCCAAGCTGCGCGACTT
CATCACTCTGCGCCTTCCACCTGGCTTCCCCGTCAAAATTGAGATTCCCCTTTTCCACGTGCTCAATGCC
CGCATCACCTTCAGCAACCTGTGTGGCTGTGATGAGCCCCTGAGCTCCGTGTGGGTGCCGGCCCCCAGCT
CTGCTGTTGCCGCATCAGGGAACCCTTTCCCGTGCGAGGTGGACCCCACCGTGTTTGAAGTGCCCAACGG
GTACAGCGTGCTGGGCATGGAGCGCAACGAGCCCCTCCGGGACGAGGACGATGACCTCCTGCAGTTCGCC
ATCCAGCAGAGCCTGCTTGAAGCGGGCACTGAGGCGGAGCAGGTGACCGTCTGGGAAGCCCTGACCAACA
CCCGGCCCGGTGCCCGCCCTCCTCCCCAGGCCACGGTTTATGAGGAACAGCTTCAGCTGGAGCGGGCCCT
CCAGGAAAGCCTGCAGCTGTCCACAGAGCCCAGGGGCCCAGGATCCCCTCCCAGGACACCCCCAGCCCCC
GGTCCACCCAGCTTTGAAGAGCAGCTGCGCCTGGCCCTGGAGTTGTCTTCACGGGAGCAGGAGGAGCGGG
AGCGGCGCGGGCAGCAGGAGGAGGAGGACTTACAGCGGATCCTGCAGCTGTCACTCACTGAGCACTGA

Translation (605 aa):
MAGPGPTFPLHRLVWANRHRELEAALHSHQHDIEQEDPRGRTPLELAVSLGNLESVRVLLRHNANVGKEN
RQGWAVLQEAVSTGDPEMVQLVLQYRDYQRATQRLAGIPELLNKLRQAPDFYVEMKWEFTSWVPLVSKMC
PSDVYRVWKRGESLRVDTSLLGFEHMTWQRGRRSFIFKGQEAGALVMEVDHDRQVVHVETLGLTLQEPET
LLAAMRPSEEHVASRLTSPIVSTHLDTRNVAFERNKCGIWGWRSEKMETVSGYEAKVYSATNVELVTRTR
TEHLSDQDKSRSKAGKTPFQSFLGMAQQHSSHTGAPVQQAASPTNPTAISPEEYFDPNFSLESRNIGRPI
EMSSKVQRFKATLWLSEEHPLSLGDQVTPIIDLMAISNAHFAKLRDFITLRLPPGFPVKIEIPLFHVLNA
RITFSNLCGCDEPLSSVWVPAPSSAVAASGNPFPCEVDPTVFEVPNGYSVLGMERNEPLRDEDDDLLQFA
IQQSLLEAGTEAEQVTVWEALTNTRPGARPPPQATVYEEQLQLERALQESLQLSTEPRGPGSPPRTPPAP
GPPSFEEQLRLALELSSREQEERERRGQQEEEDLQRILQLSLTEH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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