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Report for CCDS45324.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45324.1 Public Homo sapiens 15 TMC3 24 110 108 CCDS HistoryNCBI Gene:342125Re-query CCDS DB by CCDS ID:45324.1See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45324.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000359440.6 ENSP00000352413.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000359440.6Link to Ensembl Protein Viewer:ENSP00000352413.5Re-query CCDS DB by Nucleotide ID:ENST00000359440Re-query CCDS DB by Protein ID:ENSP00000352413
Original member Current member NCBI NM_001080532.3 NP_001074001.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001080532.3Link to Protein Sequence:NP_001074001.1Re-query CCDS DB by Nucleotide ID:NM_001080532Re-query CCDS DB by Protein ID:NP_001074001Link to BLAST:NP_001074001.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001074001.1 1100 Q7Z5M5-1 1100 100% 0 0

Chromosomal Locations for CCDS 45324.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 81332419 81333262 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 81334720 81334975 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 81336609 81336651 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 81337846 81337924 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 81338655 81338780 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 81339394 81339504 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 81341390 81341518 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 81343278 81343345 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 81343917 81344045 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 81344766 81345011 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 81346365 81346443 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 81349458 81349567 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 81351694 81351841 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 81355725 81355768 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 81356447 81356594 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 81358149 81358291 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 81358402 81358500 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 81359365 81359471 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 81362220 81362301 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 81368253 81368328 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 81372591 81372737 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 81373989 81374077 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3303 nt):
ATGAAAACCTCGAAGGCATCCCAGCGCTATAGAGGCATCCGGAGAAATGCCAGCCAGTGCTACCTCTACC
AGGAATCTCTGCTGCTCAGCAACTTGGATGACAGCTTTAGTGCTGATGAAACAGGGGACAGCAATGATCC
GGAACAAATCTTCCAGAATATACAGTTCCAGAAAGATCTCATGGCAAACATTCGCTGCAGACCCTGGACT
ATGGGACAGAAGCTGAGGGCATTGAGACAAGCGAAGAACATTGTGCTGAAGTTTGAAGGGAGGCTGACCA
GGACCCGAGGCTACCAAGCAGCAGGTGCAGAGCTCTGGCGGAAATTTGCTCGTCTCGCCTGTAACTTTGT
GGTCATCTTCATTCCCTGGGAAATGAGGATAAAGAAAATCGAGAGTCATTTTGGATCTGGCGTTGCCTCC
TATTTCATATTCTTGAGATGGTTATTTGGAATTAATATTGTGCTCACCATTATGACAGGTGCTTTTATTG
TCATTCCAGAGCTGATTGCAGGCCAGCCCTTTGGAAGCACAGCCAGGAAGACCATCCCCAAGGAGCAGGT
TTCGTCTGCCCAAGACCTGGACACCGTCTGGTCTCTGGGGGGCTACCTCCAGTACTCTGTCCTCTTCTAC
GGATATTACGGCAGGGAGAGGAAGATCGGGAGAGCTGGCTACCGGCTGCCCTTGGCGTATTTCCTAGTGG
GGATGGCAGTGTTTGCTTACAGCTTCATCATTCTTTTAAAAAAGATGGCTAAGAACTCCCGCACGAGTCT
TGCCAGTGCTTCCAATGAAAACTATACCTTCTGCTGGCGGGTGTTCTGTGCCTGGGATTACCTCATTGGA
AACCCAGAGGCTGCAGAGAGCAAAACAGCTGCCATAGTGAACAGCATCAGGGAAGCTATATTGGAAGAAC
AGGAGAAAAAGAAAAGCAAAAACCTGGCAGTGACCATCTGCCTGAGGATTATTGCCAACATCCTGGTGCT
TCTCTCACTGGCTGGGAGCATTTATCTCATCTACTTTGTGGTGGACCGGTCCCAGAAGCTGGAGCAGTCG
AAGAAGGAGCTGACACTTTGGGAAAAGAATGAGGTCAGTGTGGTGGTCTCCCTCGTCACCATGATAGCAC
CATCAGCCTTTGACCTCATTGCTGCCTTAGAGATGTACCACCCCAGGACCACGCTGCGCTTCCAGCTTGC
AAGGGTCCTTGTGCTGTATTTGGGAAATCTCTACAGCCTGATCATTGCTCTCCTGGACAAAGTTAACAGC
ATGAGCATTGAGGAAATGGCTACCAAAAATAACACAAGTCATTGGATAGATTCCACCACCTTCTTTGCAA
CCAGGACAGCCCCTGAAGAAGAGAAATGGTCCACATCTCGGCCTGGAATGGGGCTCAGGAGAAACAACAC
ATGGGCCTTGGAAGAGACCAGCATTTCAGCTTATACCATGCCTCTTATAAAGGCCAACAAGACTAGCCTC
CACACTCAGAGTCCACAAGACCAGTGCTGGGAGACATACGTTGGTCAGGAGATGCTGAAGCTCTCCATCA
TTGACATGCTCTTCACCGTGGCGAGCATTCTGCTCATAGACTTCTTCCGAGGACTTTTCGTGCGGTACTT
AAGTGACTACTGGTGTTGGGATCTGGAGAGCAAGTTTCCTGAATATGGAGAATTCAAAATAGCTGAGAAT
GTGCTACATTTAGTCTACAACCAAGGAATGATTTGGATGGGGGCCTTCTTCTCCCCATGTCTCCCAGCGT
TCAACGTTCTCAAACTCATTGGGCTCATGTACCTGAGAAGCTGGGCTGTGCTGACCTGCAATGTGCCCCA
CCAGCAAGTATTTCGAGCCTCAAGATCCAACAACTTCTACTTGGCAATGCTCCTGTTTATGCTGTTTCTG
TGCATGCTGCCAACCATTTTTGCTATTGTCCGATACAAGCCATCTCTAAACTGTGGGCCATTCAGTGGAC
AAGAGAAAATTTATGACATTGTGTCAGAAACGATTGAGAAAGACTTTCCTGTGTGGTTTGGCTCCGTGGT
TGGACACATCAGTAGCCCCGTGGTCATCCTGCCCGCAGTACTCCTGCTTTTCATGCTCATCTATTATCTC
CAGAGCATCGCACGGTCTCTAAAGCTCAGCAACCACCAGCTCAAAATGCAGATCCAAAACGCAAGATCAG
AGGATAAGAAAAAGGTTGCCCAGATGGTAGAAGCCCGAATCCAGACCCAGGAAGAAAGCACCAAGAAGCT
TCCAAACGACAGTGATCTTACCAGCCAGCTGTCCTCAGCGCACTCGGGCACACCCCAAAACAACGGCAAC
GTGGCCCATTTTGACTCAGGGAGCAGCAAGAGTGGCAGGATAGAGACAGTCGCACAGTCCATGCCCCAGA
GCCCGAGGCCAGGGGACAGGGCTCCTAGCTCACCTCTCCCTGGGGTCCCCAAATCCAGGCTAGAGCATGA
AACTAACAGGTATCTGCACGGTCTGTGTGCAAGCACCAGTGACCTTCACAGGAACAGATCGCGCACACCT
ATGACATTTACAACGCACATCGAAGATGTACACTCAGAACCTCTTTTCCGAAAAGACTTTCAGCAAATCA
ACCCTCCTCACCGTGGACCACAGGCCTCGACTTTGCTGGCACAGGGTCCCAGGCCCCACGCCCCCAGATA
CTATGTCATTAATGAATGTGACTCTTACAAGAAAAAACATCTAAATGTCTGGCCAGAAAGACATTTCAAG
ATAGATGCTTCAGGTGACATTGTGGAGCTGTACCCCAGGAACGTGCGACAATATGCATCCCGGGTCCCCC
GCCAGCCTCCCTCCCCACAGCTGAGTGAAGAAGAGGAGGAGACGCCAAGCAGAGATTGGATCAAACGGTC
TCTTCCCCCACGCTCCCTGATAGACCTCCGTCGGGCTCCTCATTTTTATATTGGGGAGAGGTCCGAAAGT
CAGACCCGGGATCCCGAGCACCAGGGGAGGGTGCACTACAAGTCGTGGAATGAAGATTTTGAGGGTCACC
TTGAGAGGCCAGCCTATGTGCCCAGAAAGCCACGATCCCGGAATTTCCAATACCCACAGCCCCCTCTGAA
GCCCAGAGGGAAGCCCAGGTTCGAGCCATCCCTCACGGAATCTGACTCCGTGTCGGCAGCATCCAGCAGT
GACCAGCAGAACAGCAGCGCTGACCAGTACCTGCAGGTCACCCACAGCCAGGGCAGGTTCCCGAGGTCCG
TGGGCCAGCCCAGCAGGAGGAAGGCCAAGTCGGGGCAGGAGCTGACCGTGGATCTGGATGACTTGATTTG
TTCAGATGTCTAG

Translation (1100 aa):
MKTSKASQRYRGIRRNASQCYLYQESLLLSNLDDSFSADETGDSNDPEQIFQNIQFQKDLMANIRCRPWT
MGQKLRALRQAKNIVLKFEGRLTRTRGYQAAGAELWRKFARLACNFVVIFIPWEMRIKKIESHFGSGVAS
YFIFLRWLFGINIVLTIMTGAFIVIPELIAGQPFGSTARKTIPKEQVSSAQDLDTVWSLGGYLQYSVLFY
GYYGRERKIGRAGYRLPLAYFLVGMAVFAYSFIILLKKMAKNSRTSLASASNENYTFCWRVFCAWDYLIG
NPEAAESKTAAIVNSIREAILEEQEKKKSKNLAVTICLRIIANILVLLSLAGSIYLIYFVVDRSQKLEQS
KKELTLWEKNEVSVVVSLVTMIAPSAFDLIAALEMYHPRTTLRFQLARVLVLYLGNLYSLIIALLDKVNS
MSIEEMATKNNTSHWIDSTTFFATRTAPEEEKWSTSRPGMGLRRNNTWALEETSISAYTMPLIKANKTSL
HTQSPQDQCWETYVGQEMLKLSIIDMLFTVASILLIDFFRGLFVRYLSDYWCWDLESKFPEYGEFKIAEN
VLHLVYNQGMIWMGAFFSPCLPAFNVLKLIGLMYLRSWAVLTCNVPHQQVFRASRSNNFYLAMLLFMLFL
CMLPTIFAIVRYKPSLNCGPFSGQEKIYDIVSETIEKDFPVWFGSVVGHISSPVVILPAVLLLFMLIYYL
QSIARSLKLSNHQLKMQIQNARSEDKKKVAQMVEARIQTQEESTKKLPNDSDLTSQLSSAHSGTPQNNGN
VAHFDSGSSKSGRIETVAQSMPQSPRPGDRAPSSPLPGVPKSRLEHETNRYLHGLCASTSDLHRNRSRTP
MTFTTHIEDVHSEPLFRKDFQQINPPHRGPQASTLLAQGPRPHAPRYYVINECDSYKKKHLNVWPERHFK
IDASGDIVELYPRNVRQYASRVPRQPPSPQLSEEEEETPSRDWIKRSLPPRSLIDLRRAPHFYIGERSES
QTRDPEHQGRVHYKSWNEDFEGHLERPAYVPRKPRSRNFQYPQPPLKPRGKPRFEPSLTESDSVSAASSS
DQQNSSADQYLQVTHSQGRFPRSVGQPSRRKAKSGQELTVDLDDLICSDV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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