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Report for CCDS14202.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14202.1 Public Homo sapiens X YY2 24 110 108 CCDS HistoryNCBI Gene:404281Re-query CCDS DB by CCDS ID:14202.1See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14202.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000429584.3 ENSP00000389381.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000429584.3Link to Ensembl Protein Viewer:ENSP00000389381.2Re-query CCDS DB by Nucleotide ID:ENST00000429584Re-query CCDS DB by Protein ID:ENSP00000389381
Original member Current member NCBI NM_206923.4 NP_996806.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_206923.4Link to Protein Sequence:NP_996806.2Re-query CCDS DB by Nucleotide ID:NM_206923Re-query CCDS DB by Protein ID:NP_996806Link to BLAST:NP_996806.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_996806.2 372 O15391 372 100% 0 0

Chromosomal Locations for CCDS 14202.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 21856485 21857603 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1119 nt):
ATGGCCTCCAACGAAGATTTCTCCATCACACAAGACCTGGAGATCCCGGCAGATATTGTGGAGCTCCACG
ACATCAATGTGGAGCCCCTTCCTATGGAGGACATTCCGACGGAAAGCGTCCAGTACGAGGATGTGGATGG
CAATTGGATCTACGGTGGCCACAACCATCCGCCATTGATGGTGTTGCAGCCGCTCTTCACGAACACGGGC
TATGGCGACCACGACCAGGAAATGCTTATGTTGCAGACACAAGAGGAAGTGGTGGGCTATTGCGACTCAG
ACAACCAGCTAGGCAACGACTTGGAGGACCAGTTGGCCCTCCCGGATAGCATTGAAGACGAGCACTTCCA
GATGACCCTGGCCTCTCTGTCGGCCTCGGCGGCATCAACATCAACATCAACCCAGAGCCGCAGCAAAAAG
CCCAGCAAAAAGCCCAGCGGCAAGAGTGCCACCAGCACTGAGGCCAACCCGGCAGGCAGCAGCTCCAGCC
TGGGCACGAGGAAGTGGGAGCAGAAGCAAATGCAGGTCAAAACGCTGGAGGGTGAGTTTTCCGTGACTAT
GTGGTCCCCTAACGATAACAATGACCAAGGGGCAGTGGGTGAAGGCCAGGCTGAAAACCCACCTGATTAT
TCCGAGTACTTGAAAGGGAAGAAACTTCCTCCTGGGGGGTTACCAGGCATTGATCTCTCAGATCCTAAAC
AGCTGGCAGAATTTACTAAAGTGAAGCCCAAAAGGTCCAAAGGAGAACCTCCCAAAACAGTCCCTTGCTC
TTATAGCGGCTGCGAAAAGATGTTCCGGGATTACGCCGCCATGAGAAAACATCTCCACATCCACGGGCCC
AGAGTCCACGTATGTGCAGAATGTGGCAAAGCTTTTCTTGAGAGCTCAAAGCTGAGACGACACCAGCTGG
TCCACACCGGCGAGAAGCCCTTTCAGTGCACATTCGAAGGCTGCGGGAAACGCTTTTCCCTTGATTTCAA
TTTGCGCACACACTTGCGCATCCACACCGGCGATAAGCCCTTCGTGTGCCCCTTCGATGTTTGCAACAGG
AAGTTCGCTCAGTCAACCAACCTGAAAACCCACATATTAACGCATGTGAAGACCAAAAACAACCCGTGA

Translation (372 aa):
MASNEDFSITQDLEIPADIVELHDINVEPLPMEDIPTESVQYEDVDGNWIYGGHNHPPLMVLQPLFTNTG
YGDHDQEMLMLQTQEEVVGYCDSDNQLGNDLEDQLALPDSIEDEHFQMTLASLSASAASTSTSTQSRSKK
PSKKPSGKSATSTEANPAGSSSSLGTRKWEQKQMQVKTLEGEFSVTMWSPNDNNDQGAVGEGQAENPPDY
SEYLKGKKLPPGGLPGIDLSDPKQLAEFTKVKPKRSKGEPPKTVPCSYSGCEKMFRDYAAMRKHLHIHGP
RVHVCAECGKAFLESSKLRRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHLRIHTGDKPFVCPFDVCNR
KFAQSTNLKTHILTHVKTKNNP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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