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Report for CCDS31770.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31770.1 Public Homo sapiens 12 YARS2 24 110 108 CCDS HistoryNCBI Gene:51067Re-query CCDS DB by CCDS ID:31770.1See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31770.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000324868.13 ENSP00000320658.8 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000324868.13Link to Ensembl Protein Viewer:ENSP00000320658.8Re-query CCDS DB by Nucleotide ID:ENST00000324868Re-query CCDS DB by Protein ID:ENSP00000320658
Original member Current member NCBI NM_001040436.3 NP_001035526.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001040436.3Link to Protein Sequence:NP_001035526.1Re-query CCDS DB by Nucleotide ID:NM_001040436Re-query CCDS DB by Protein ID:NP_001035526Link to BLAST:NP_001035526.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001035526.1 477 Q9Y2Z4 477 100% 0 0

Chromosomal Locations for CCDS 31770.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 32747204 32747363 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 32749937 32750107 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 32750719 32750874 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 32753918 32754085 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 32755096 32755874 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1434 nt):
ATGGCGGCGCCCATCTTGCGGTCCTTTTCCTGGGGCCGGTGGTCTGGTACCCTAAATCTCTCAGTATTGT
TGCCCTTGGGGCTGCGTAAGGCCCACTCGGGCGCTCAGGGGTTACTGGCAGCGCAGAAGGCTCGAGGTCT
GTTCAAGGACTTCTTCCCGGAGACGGGGACGAAAATAGAGCTCCCAGAGCTCTTCGACCGTGGCACGGCG
AGTTTTCCCCAAACCATTTACTGTGGCTTCGACCCCACGGCAGACTCGCTTCATGTGGGTCATCTACTTG
CGCTGCTGGGCCTGTTTCATTTGCAGCGAGCGGGCCACAACGTGATCGCGCTGGTGGGAGGCGCCACGGC
GCGCCTGGGAGACCCGAGCGGCCGTACCAAGGAACGCGAGGCGCTGGAGACAGAGCGCGTGCGAGCCAAC
GCGCGAGCTCTGCGCCTAGGGCTTGAGGCCCTGGCGGCTAATCACCAGCAGCTTTTCACTGATGGGCGCT
CCTGGGGCAGCTTCACTGTGCTGGACAACTCGGCCTGGTACCAGAAGCAGCACCTGGTGGACTTCCTGGC
GGCAGTGGGGGGTCACTTCCGCATGGGGACGCTGCTGAGCCGGCAGAGCGTGCAGCTGCGGCTCAAGAGC
CCCGAGGGCATGAGCTTGGCCGAGTTCTTTTACCAGGTGCTCCAGGCCTATGACTTCTATTACCTCTTCC
AGCGTTATGGATGCAGGGTCCAGCTGGGCGGATCTGATCAACTAGGCAACATCATGTCCGGATATGAGTT
CATCAACAAGTTGACTGGAGAAGATGTATTTGGAATCACCGTTCCTCTAATTACAAGTACAACTGGAGCA
AAGCTGGGAAAGTCTGCTGGCAACGCTGTTTGGCTAAACAGAGATAAGACATCTCCATTTGAATTGTATC
AATTCTTTGTCAGGCAACCGGACGATTCAGTGGAAAGGTACCTGAAGCTGTTCACTTTCCTGCCCCTTCC
AGAGATTGATCATATCATGCAGCTGCATGTCAAAGAGCCAGAAAGGCGGGGTCCTCAGAAACGACTGGCA
GCAGAAGTAACAAAGCTTGTTCATGGACGAGAAGGATTGGATTCTGCTAAAAGGTGTACACAAGCCCTTT
ATCACAGTAGCATAGATGCACTGGAGGTCATGTCTGATCAGGAGTTAAAAGAGTTGTTTAAAGAAGCTCC
ATTTTCTGAATTTTTTCTCGATCCTGGAACAAGTGTCCTAGATACTTGCCGCAAAGCAAATGCCATTCCA
GATGGTCCCCGAGGGTATCGAATGATAACAGAAGGCGGAGTCAGCATAAATCACCAACAAGTAACAAATC
CTGAGAGTGTTTTAATTGTTGGACAACATATTCTCAAGAATGGACTTTCCTTACTTAAAATAGGAAAAAG
AAATTTCTACATTATAAAATGGCTTCAGTTGTGA

Translation (477 aa):
MAAPILRSFSWGRWSGTLNLSVLLPLGLRKAHSGAQGLLAAQKARGLFKDFFPETGTKIELPELFDRGTA
SFPQTIYCGFDPTADSLHVGHLLALLGLFHLQRAGHNVIALVGGATARLGDPSGRTKEREALETERVRAN
ARALRLGLEALAANHQQLFTDGRSWGSFTVLDNSAWYQKQHLVDFLAAVGGHFRMGTLLSRQSVQLRLKS
PEGMSLAEFFYQVLQAYDFYYLFQRYGCRVQLGGSDQLGNIMSGYEFINKLTGEDVFGITVPLITSTTGA
KLGKSAGNAVWLNRDKTSPFELYQFFVRQPDDSVERYLKLFTFLPLPEIDHIMQLHVKEPERRGPQKRLA
AEVTKLVHGREGLDSAKRCTQALYHSSIDALEVMSDQELKELFKEAPFSEFFLDPGTSVLDTCRKANAIP
DGPRGYRMITEGGVSINHQQVTNPESVLIVGQHILKNGLSLLKIGKRNFYIIKWLQL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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