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Report for CCDS12695.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12695.1 Public Homo sapiens 19 TMEM160 24 110 108 CCDS HistoryNCBI Gene:54958Re-query CCDS DB by CCDS ID:12695.1See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12695.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000253047.7 ENSP00000253047.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000253047.7Link to Ensembl Protein Viewer:ENSP00000253047.5Re-query CCDS DB by Nucleotide ID:ENST00000253047Re-query CCDS DB by Protein ID:ENSP00000253047
Original member Current member NCBI NM_017854.2 NP_060324.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_017854.2Link to Protein Sequence:NP_060324.1Re-query CCDS DB by Nucleotide ID:NM_017854Re-query CCDS DB by Protein ID:NP_060324Link to BLAST:NP_060324.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_060324.1 188 Q9NX00 188 100% 0 0

Chromosomal Locations for CCDS 12695.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 47045987 47046252 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 47046593 47046685 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 47048407 47048614 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (567 nt):
ATGGGAGGCGGCTGGTGGTGGGCTCGGGCCGCTCGCCTTGCCCGTCTTCGCTTCCGGAGGTCGCTACTGC
CGCCTCAGCGGCCCCGGAGCGGGGGCGCCCGGGGGTCCTTCGCCCCCGGCCACGGTCCCCGCGCCGGGGC
TTCGCCGCCCCCAGTGTCCGAGCTGGATCGTGCGGACGCCTGGCTCCTCCGAAAAGCGCACGAGACAGCC
TTCCTCTCCTGGTTCCGCAATGGCCTCCTGGCATCGGGCATCGGGGTCATCTCCTTCATGCAGAGTGACA
TGGGTCGGGAAGCAGCATATGGCTTCTTCCTGCTGGGCGGCCTGTGCGTGGTGTGGGGCAGCGCCTCGTA
CGCCGTGGGCCTGGCGGCGCTGCGAGGACCCATGCAGCTGACGCTGGGGGGCGCGGCCGTGGGCGCGGGC
GCCGTGCTGGCCGCCAGCCTGCTCTGGGCGTGCGCCGTGGGCCTCTACATGGGGCAGCTGGAGCTGGACG
TGGAGCTGGTGCCCGAGGACGACGGGACGGCCTCCGCGGAAGGCCCTGATGAGGCGGGTCGGCCGCCACC
CGAGTGA

Translation (188 aa):
MGGGWWWARAARLARLRFRRSLLPPQRPRSGGARGSFAPGHGPRAGASPPPVSELDRADAWLLRKAHETA
FLSWFRNGLLASGIGVISFMQSDMGREAAYGFFLLGGLCVVWGSASYAVGLAALRGPMQLTLGGAAVGAG
AVLAASLLWACAVGLYMGQLELDVELVPEDDGTASAEGPDEAGRPPPE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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