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Report for CCDS34513.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34513.1 Public Homo sapiens 6 FAM229B 24 110 108 CCDS HistoryNCBI Gene:619208Re-query CCDS DB by CCDS ID:34513.1See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 34513.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000368656.7 ENSP00000357645.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000368656.7Link to Ensembl Protein Viewer:ENSP00000357645.2Re-query CCDS DB by Nucleotide ID:ENST00000368656Re-query CCDS DB by Protein ID:ENSP00000357645
Original member Current member EBI ENST00000604268.1 ENSP00000474987.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000604268.1Link to Ensembl Protein Viewer:ENSP00000474987.1Re-query CCDS DB by Nucleotide ID:ENST00000604268Re-query CCDS DB by Protein ID:ENSP00000474987
Original member Current member NCBI NM_001033564.3 NP_001028736.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001033564.3Link to Protein Sequence:NP_001028736.1Re-query CCDS DB by Nucleotide ID:NM_001033564Re-query CCDS DB by Protein ID:NP_001028736Link to BLAST:NP_001028736.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001028736.1 80 Q4G0N7 80 100% 0 0

Chromosomal Locations for CCDS 34513.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 112099284 112099408 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 112100670 112100787 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (243 nt):
ATGCCTTTTCAATTTGGAACCCAGCCAAGGAGGTTTCCAGTGGAAGGAGGAGATTCTTCAATTGAGCTGG
AACCTGGGCTGAGCTCCAGTGCTGCCTGTAATGGGAAGGAGATGTCACCAACCAGGCAACTCCGGAGGTG
CCCTGGAAGTCATTGCCTGACAATAACTGATGTTCCCGTCACTGTTTATGCAACAACGAGAAAGCCACCT
GCACAAAGCAGCAAGGAAATGCATCCTAAATAG

Translation (80 aa):
MPFQFGTQPRRFPVEGGDSSIELEPGLSSSAACNGKEMSPTRQLRRCPGSHCLTITDVPVTVYATTRKPP
AQSSKEMHPK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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