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Report for CCDS7968.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7968.1 Public Homo sapiens 11 OR10W1 24 110 108 CCDS HistoryNCBI Gene:81341Re-query CCDS DB by CCDS ID:7968.1See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7968.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000395079.2 ENSP00000378516.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000395079.2Link to Ensembl Protein Viewer:ENSP00000378516.2Re-query CCDS DB by Nucleotide ID:ENST00000395079Re-query CCDS DB by Protein ID:ENSP00000378516
Original member Current member NCBI NM_207374.3 NP_997257.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_207374.3Link to Protein Sequence:NP_997257.2Re-query CCDS DB by Nucleotide ID:NM_207374Re-query CCDS DB by Protein ID:NP_997257Link to BLAST:NP_997257.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_997257.2 305 Q8NGF6 305 100% 0 0

Chromosomal Locations for CCDS 7968.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 58266941 58267858 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (918 nt):
ATGGAATTTGTGTTCCTGGCCTATCCCTCCTGCCCAGAACTGCATATTCTGTCCTTCCTTGGGGTCAGCC
TGGTTTATGGTTTGATCATCACTGGGAACATTCTCATTGTGGTGTCCATTCACACAGAAACCTGTCTATG
CACATCCATGTACTATTTCCTGGGCAGCCTTTCTGGGATTGAAATATGCTACACTGCAGTGGTGGTGCCC
CATATCCTGGCCAACACCCTACAGTCAGAGAAGACCATCACTCTCCTGGGCTGTGCCACCCAGATGGCTT
TCTTCATTGCACTGGGCAGTGCTGATTGCTTCCTCTTGGCTGCCATGGCCTATGACCGCTATGTGGCCAT
TTGCCACCCGTTGCAGTACCCTCTCCTCATGACATTGACTCTTTGTGTCCACTTGGTTGTGGCATCAGTC
ATCAGTGGTCTGTTCCTGTCCTTACAACTGGTGGCCTTCATCTTCTCTCTGCCATTCTGCCAGGCTCAGG
GCATTGAGCACTTCTTTTGTGATGTGCCACCAGTCATGCATGTTGTTTGTGCTCAGAGTCACATTCATGA
GCAGTCAGTGCTGGTGGCAGCCATACTAGCCATTGCTGTGCCTTTCTTCCTCATCACCACCTCCTACACC
TTCATAGTGGCTGCTCTGCTCAAGATCCACTCGGCTGCTGGCCGCCACCGGGCCTTCTCCACCTGCTCTT
CCCACCTCACTGTGGTGCTGCTGCAGTATGGCTGCTGTGCCTTCATGTACCTGTGCCCCAGCTCCAGCTA
CAACCCCAAGCAAGATCGGTTCATCTCACTGGTGTACACATTGGGAACCCCACTGCTCAACCCACTTATC
TATGCCCTGAGGAACAGTGAGATGAAAGGGGCCGTAGGGAGAGTTCTTACCAGGAACTGCCTTTCCCAGA
ACAGCTAG

Translation (305 aa):
MEFVFLAYPSCPELHILSFLGVSLVYGLIITGNILIVVSIHTETCLCTSMYYFLGSLSGIEICYTAVVVP
HILANTLQSEKTITLLGCATQMAFFIALGSADCFLLAAMAYDRYVAICHPLQYPLLMTLTLCVHLVVASV
ISGLFLSLQLVAFIFSLPFCQAQGIEHFFCDVPPVMHVVCAQSHIHEQSVLVAAILAIAVPFFLITTSYT
FIVAALLKIHSAAGRHRAFSTCSSHLTVVLLQYGCCAFMYLCPSSSYNPKQDRFISLVYTLGTPLLNPLI
YALRNSEMKGAVGRVLTRNCLSQNS


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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