NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS32066.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32066.1 Public Homo sapiens 14 BRMS1L 24 110 108 CCDS HistoryNCBI Gene:84312Re-query CCDS DB by CCDS ID:32066.1See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32066.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000216807.12 ENSP00000216807.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000216807.12Link to Ensembl Protein Viewer:ENSP00000216807.6Re-query CCDS DB by Nucleotide ID:ENST00000216807Re-query CCDS DB by Protein ID:ENSP00000216807
Original member Current member NCBI NM_032352.4 NP_115728.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032352.4Link to Protein Sequence:NP_115728.2Re-query CCDS DB by Nucleotide ID:NM_032352Re-query CCDS DB by Protein ID:NP_115728Link to BLAST:NP_115728.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_115728.2 323 Q5PSV4-1 323 100% 0 0

Chromosomal Locations for CCDS 32066.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 35826517 35826658 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 35831410 35831500 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 35832978 35833105 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 35834844 35834923 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 35862590 35862686 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 35863870 35863953 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 35864935 35864999 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 35865722 35865761 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 35867906 35868032 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 35870360 35870477 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (972 nt):
ATGCCAGTCCATTCCCGAGGGGATAAGAAGGAGACCAACCATCACGATGAGATGGAGGTGGACTACGCCG
AAAATGAGGGGAGCAGCTCCGAGGACGAGGACACTGAGAGCTCGTCGGTCTCCGAGGATGGAGATAGCTC
AGAAATGGATGATGAAGACTGTGAAAGAAGAAGAATGGAATGTTTGGATGAAATGTCCAATCTTGAAAAA
CAGTTTACCGATCTCAAAGATCAACTTTATAAAGAACGATTAAGTCAGGTGGATGCAAAACTACAAGAAG
TCATAGCTGGAAAAGCACCAGAATACTTGGAACCGCTGGCAACTTTACAGGAAAATATGCAAATTCGTAC
AAAGGTAGCAGGAATCTATAGAGAGCTCTGCTTAGAATCTGTAAAGAACAAATATGAATGTGAAATTCAA
GCTTCTCGCCAGCATTGTGAGAGCGAAAAGCTGTTGCTATATGATACAGTCCAGAGTGAACTAGAGGAGA
AGATAAGAAGGCTTGAAGAGGATAGGCACAGCATTGATATTACCTCAGAGCTGTGGAATGATGAGCTTCA
GTCAAGAAAAAAGAGGAAGGATCCTTTCAGTCCTGACAAAAAGAAGCCAGTTGTTGTTTCAGGTCCATAT
ATAGTTTATATGCTACAAGATCTTGATATTCTTGAAGACTGGACAACAATTAGGAAGGCAATGGCTACAT
TGGGGCCACACAGAGTGAAAACGGAACCACCTGTGAAACTGGAAAAACATCTGCACAGTGCTAGATCTGA
AGAGGGAAGACTATATTATGATGGTGAATGGTATATACGTGGACAAACAATATGTATTGATAAAAAAGAT
GAATGTCCTACAAGTGCTGTAATTACAACAATTAACCATGATGAAGTTTGGTTTAAGAGGCCTGATGGAA
GCAAATCTAAGCTTTACATTTCACAGCTACAGAAAGGAAAATATTCAATTAAACATTCATAA

Translation (323 aa):
MPVHSRGDKKETNHHDEMEVDYAENEGSSSEDEDTESSSVSEDGDSSEMDDEDCERRRMECLDEMSNLEK
QFTDLKDQLYKERLSQVDAKLQEVIAGKAPEYLEPLATLQENMQIRTKVAGIYRELCLESVKNKYECEIQ
ASRQHCESEKLLLYDTVQSELEEKIRRLEEDRHSIDITSELWNDELQSRKKRKDPFSPDKKKPVVVSGPY
IVYMLQDLDILEDWTTIRKAMATLGPHRVKTEPPVKLEKHLHSARSEEGRLYYDGEWYIRGQTICIDKKD
ECPTSAVITTINHDEVWFKRPDGSKSKLYISQLQKGKYSIKHS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH