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Report for CCDS7951.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7951.1 Public Homo sapiens 11 TNKS1BP1 24 110 108 CCDS HistoryNCBI Gene:85456Re-query CCDS DB by CCDS ID:7951.1See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7951.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000358252.8 ENSP00000350990.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000358252.8Link to Ensembl Protein Viewer:ENSP00000350990.3Re-query CCDS DB by Nucleotide ID:ENST00000358252Re-query CCDS DB by Protein ID:ENSP00000350990
Original member Current member EBI ENST00000532437.1 ENSP00000437271.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000532437.1Link to Ensembl Protein Viewer:ENSP00000437271.1Re-query CCDS DB by Nucleotide ID:ENST00000532437Re-query CCDS DB by Protein ID:ENSP00000437271
Original member Current member NCBI NM_033396.3 NP_203754.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_033396.3Link to Protein Sequence:NP_203754.2Re-query CCDS DB by Nucleotide ID:NM_033396Re-query CCDS DB by Protein ID:NP_203754Link to BLAST:NP_203754.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_203754.2 1729 Q9C0C2-1 1729 100% 0 0

Chromosomal Locations for CCDS 7951.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 57300540 57300600 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 57300884 57301041 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 57301807 57301943 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 57302074 57302224 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 57302459 57302825 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 57308395 57310556 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 57312534 57313889 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 57317818 57317887 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 57320079 57320712 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 57321792 57321885 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (5190 nt):
ATGAAAGTGTCTACTCTCAGGGAAAGCTCAGCCATGGCTTCCCCACTGCCCCGGGAGATGGAGGAGGAGC
TGGTGCCTACTGGCTCTGAGCCAGGTGACACTCGGGCCAAACCCCCTGTCAAGCCCAAACCCCGGGCCCT
GCCTGCCAAGCCAGCCCTGCCTGCCAAACCCAGCCTGCTGGTGCCTGTTGGGCCTCGGCCTCCCCGGGGT
CCCCTGGCTGAGTTGCCTTCTGCCAGGAAGATGAACATGCTGGCAGGACCCCAGCCCTATGGTGGCAGCA
AGCGCCCCCTTCCCTTTGCACCAAGGCCTGCGGTTGAGGCCTCCACTGGAGGAGAAGCCACCCAAGAGAC
TGGGAAAGAGGAGGCTGGGAAAGAGGAGCCACCCCCTTTGACACCCCCAGCTCGATGTGCAGCCCCAGGG
GGTGTACGGAAGGCCCCTGCCCCTTTCCGCCCAGCCTCAGAGCGCTTCGCGGCCACCACGGTGGAAGAGA
TCCTGGCCAAGATGGAGCAGCCTCGGAAGGAGGTCCTTGCCAGCCCCGACCGCCTGTGGGGTTCCCGCCT
CACCTTTAACCACGATGGCAGCTCGCGATATGGCCCCAGGACCTATGGCACGACCACTGCTCCCAGGGAT
GAGGATGGCAGCACCCTCTTCAGGGGATGGTCCCAGGAGGGGCCAGTAAAGTCTCCAGCAGAGTGCCGGG
AAGAGCACAGCAAGACCCCTGAGGAGAGGAGCCTTCCTTCCGACCTGGCCTTCAACGGGGACCTGGCTAA
GGCAGCCAGCTCGGAGCTACCTGCTGATATTTCCAAGCCCTGGATTCCCTCAAGTCCAGCCCCCTCCTCA
GAGAATGGAGGCCCTGCCAGCCCAGGCCTCCCCGCAGAAGCCTCAGGCTCAGGCCCTGGCTCTCCCCATC
TTCACCCGCCTGATAAGAGTTCTCCCTGCCACTCACAGCTTCTGGAAGCCCAGACTCCTGAAGCTTCCCA
GGCTTCTCCCTGCCCCGCTGTGACTCCATCAGCTCCAAGTGCAGCCCTGCCTGACGAGGGCTCCCGCCAC
ACCCCCAGCCCGGGGCTCCCTGCCGAGGGGGCTCCAGAGGCCCCCAGACCCAGCAGCCCACCCCCTGAGG
TCTTGGAGCCCCATAGCCTGGATCAGCCCCCTGCCACCTCACCCCGGCCCCTGATCGAGGTGGGTGAGTT
GCTGGATCTCACTCGGACGTTTCCATCTGGCGGGGAGGAGGAGGCCAAGGGTGACGCACACCTCCGCCCC
ACCAGCCTGGTTCAGCGCCGATTCTCTGAAGGTGTGCTCCAGTCACCCAGTCAGGACCAGGAGAAGCTGG
GGGGCTCGCTGGCTGCCCTGCCCCAAGGCCAGGGGAGCCAGTTGGCCCTGGATCGTCCCTTTGGGGCAGA
GTCCAACTGGAGCTTATCACAGTCCTTCGAATGGACCTTCCCCACGAGGCCCTCGGGTCTGGGCGTGTGG
CGGCTGGACTCCCCGCCTCCCTCCCCCATCACTGAAGCCAGTGAGGCCGCCGAGGCTGCTGAGGCTGGCA
ACTTGGCCGTTTCCAGCAGGGAAGAAGGAGTGTCTCAGCAGGGGCAAGGGGCTGGGTCAGCTCCAAGTGG
GTCAGGAAGTTCCTGGGTGCAGGGGGATGATCCAAGCATGTCCCTCACCCAGAAGGGCGATGGGGAGAGT
CAACCTCAATTCCCAGCTGTTCCCCTTGAGCCCCTGCCTACAACTGAGGGCACACCTGGATTACCTTTGC
AGCAGGCAGAGGAGAGATACGAGTCGCAGGAGCCCTTGGCTGGACAGGAGTCCCCTCTCCCCCTGGCTAC
CAGGGAGGCAGCCTTGCCCATCCTGGAGCCAGTCCTGGGGCAGGAGCAGCCAGCAGCCCCTGACCAGCCC
TGTGTTCTCTTTGCTGATGCCCCTGAGCCTGGACAGGCACTGCCTGTTGAGGAGGAGGCCGTGACCCTAG
CCCGGGCTGAGACCACCCAAGCCAGGACAGAGGCTCAAGACTTGTGTAGGGCATCCCCCGAGCCTCCAGG
CCCTGAAAGCAGCTCCCGCTGGCTGGACGACCTCCTGGCTTCACCACCACCCAGTGGTGGCGGTGCAAGG
CGGGGAGCTGGAGCTGAGCTGAAGGACACACAGTCCCCAAGTACCTGCTCTGAGGGACTCCTTGGCTGGT
CCCAGAAAGATCTGCAGAGTGAATTTGGGATCACAGGAGACCCACAGCCCAGCAGTTTCAGTCCTTCCAG
CTGGTGTCAAGGTGCTTCTCAGGACTATGGCCTTGGGGGTGCAAGCCCTAGAGGAGACCCAGGTCTCGGA
GAGAGGGACTGGACCAGCAAGTATGGGCAAGGAGCAGGGGAAGGGAGCACCAGGGAGTGGGCCAGCAGGT
GTGGCATCGGCCAGGAGGAGATGGAGGCCAGCAGCAGCCAAGACCAGAGTAAAGTGTCTGCCCCAGGGGT
GCTCACAGCCCAGGACCGGGTAGTTGGAAAGCCAGCCCAGCTTGGCACTCAGCGGAGCCAGGAGGCAGAT
GTTCAGGACTGGGAGTTCAGAAAGAGGGATTCCCAGGGCACTTACTCCAGCCGGGATGCAGAACTCCAGG
ACCAGGAATTCGGAAAGAGAGATTCACTGGGTACCTACAGTAGTCGAGATGTAAGCCTTGGGGACTGGGA
ATTTGGGAAGAGAGATTCTCTGGGTGCTTATGCCAGCCAAGATGCCAACGAGCAGGGCCAAGATTTGGGG
AAGAGGGACCACCATGGTAGGTACAGCAGCCAGGATGCCGATGAGCAGGACTGGGAGTTTCAGAAGAGAG
ATGTGTCACTCGGCACCTATGGCAGCCGGGCTGCGGAGCCACAGGAACAGGAGTTTGGGAAGAGCGCTTG
GATAAGGGACTACAGCAGTGGTGGCAGCTCCAGGACCCTTGACGCCCAGGACAGAAGCTTTGGAACGAGA
CCCCTGAGCTCTGGGTTCAGCCCCGAGGAAGCCCAGCAACAGGATGAGGAATTTGAGAAGAAGATTCCAA
GTGTGGAAGACAGCCTTGGAGAGGGCAGCAGGGATGCTGGCCGGCCAGGAGAGAGAGGATCCGGGGGCTT
GTTCAGTCCTAGCACTGCCCACGTGCCGGATGGGGCACTCGGGCAGAGAGACCAGAGCAGCTGGCAAAAC
AGTGATGCTAGCCAGGAGGTGGGAGGGCATCAGGAGAGACAGCAGGCAGGGGCTCAGGGCCCTGGCAGTG
CTGACCTGGAAGATGGGGAGATGGGAAAGCGAGGCTGGGTCGGTGAGTTTAGCCTCAGTGTTGGCCCCCA
GCGAGAGGCAGCATTTAGCCCAGGGCAGCAGGACTGGAGCCGGGACTTCTGCATCGAGGCCAGTGAGAGG
AGCTATCAGTTTGGCATCATTGGCAACGACAGAGTGAGTGGTGCTGGCTTTAGCCCTTCTAGCAAGATGG
AAGGTGGTCACTTTGTGCCTCCTGGGAAGACCACAGCTGGCTCGGTGGACTGGACTGACCAGCTGGGTCT
CAGGAACTTGGAAGTGTCCAGCTGTGTGGGTTCTGGGGGCTCGAGCGAGGCCAGGGAGAGTGCCGTGGGA
CAGATGGGCTGGTCAGGTGGCCTGAGCTTGAGAGACATGAACCTGACCGGCTGTTTGGAAAGTGGAGGGT
CTGAAGAGCCGGGGGGAATCGGAGTTGGGGAGAAGGACTGGACTTCTGATGTTAATGTGAAGAGCAAAGA
TTTGGCTGAGGTCGGGGAGGGAGGAGGCCACAGCCAGGCCAGAGAGAGTGGCGTGGGGCAGACTGACTGG
TCAGGTGTGGAGGCCGGAGAGTTCCTTAAATCAAGGGAGCGTGGAGTTGGACAGGCAGACTGGACACCTG
ACCTTGGGCTGAGAAACATGGCCCCAGGGGCAGTCTGCAGTCCTGGAGAGTCCAAAGAGCTTGGGGTGGG
CCAGATGGACTGGGGTAACAATCTGGGCCTGAGGGATTTGGAGGTGACCTGTGACCCAGACTCTGGAGGT
TCTCAGGGGCTACGGGGATGTGGAGTGGGGCAGATGGACTGGACCCAGGACTTGGCGCCCCAGAATGTGG
AGCTCTTTGGGGCTCCAAGTGAAGCCAGGGAGCATGGGGTGGGCGGGGTGAGCCAGTGCCCAGAGCCCGG
CCTGAGGCACAATGGCAGCTTGTCTCCTGGCCTGGAGGCCAGAGACCCCTTGGAGGCCAGGGAGCTGGGG
GTTGGTGAGACAAGTGGGCCAGAGACCCAGGGTGAAGATTACTCCTCGTCTTCCTTGGAGCCACACCCTG
CAGACCCTGGAATGGAGACAGGAGAAGCCCTCAGCTTCGGAGCAAGCCCTGGCAGGTGCCCGGCCCGCCC
CCCACCCTCCGGCTCCCAGGGCCTGCTGGAGGAGATGCTGGCAGCCAGCAGCTCCAAGGCGGTGGCTCGG
AGGGAGTCAGCGGCCTCGGGCCTTGGGGGCCTGTTGGAGGAGGAAGGAGCCGGGGCAGGTGCTGCCCAAG
AGGAGGTGCTGGAGCCTGGCAGGGACTCTCCACCCTCCTGGAGGCCGCAGCCTGATGGTGAGGCCAGCCA
GACAGAAGACGTGGATGGCACCTGGGGCTCTTCAGCAGCCAGGTGGAGCGATCAGGGGCCAGCACAGACT
TCTCGGCGACCCTCCCAAGGCCCTCCTGCCAGATCCCCCAGTCAGGACTTCTCCTTCATTGAGGACACCG
AGATCCTCGACAGTGCCATGTATCGGAGCCGTGCCAACTTGGGGCGCAAGCGTGGGCACCGGGCCCCGGT
CATTCGGCCTGGGGGTACCTTGGGCCTGTCGGAGGCAGCAGACTCGGATGCACACCTGTTCCAGGACTCT
ACAGAGCCACGGGCATCTCGGGTGCCATCTTCAGATGAAGAGGTAGTGGAGGAACCTCAGAGCCGCCGGA
CACGGATGTCGTTGGGCACCAAGGGGCTGAAAGTCAACCTCTTTCCTGGCCTGAGCCCCTCAGCCCTGAA
GGCCAAGCTGCGCCCCCGGAATCGCTCAGCTGAGGAGGGAGAGCTGGCTGAGAGCAAGTCGAGCCAGAAG
GAGTCCGCGGTCCAGCGTTCGAAATCCTGCAAGGTCCCAGGACTGGGAAAGCCCCTCACGTTACCTCCCA
AGCCAGAGAAATCCTCAGGGTCAGAAGGATCGTCGCCCAACTGGCTTCAAGCCCTGAAACTGAAGAAGAA
GAAGGTCTGA

Translation (1729 aa):
MKVSTLRESSAMASPLPREMEEELVPTGSEPGDTRAKPPVKPKPRALPAKPALPAKPSLLVPVGPRPPRG
PLAELPSARKMNMLAGPQPYGGSKRPLPFAPRPAVEASTGGEATQETGKEEAGKEEPPPLTPPARCAAPG
GVRKAPAPFRPASERFAATTVEEILAKMEQPRKEVLASPDRLWGSRLTFNHDGSSRYGPRTYGTTTAPRD
EDGSTLFRGWSQEGPVKSPAECREEHSKTPEERSLPSDLAFNGDLAKAASSELPADISKPWIPSSPAPSS
ENGGPASPGLPAEASGSGPGSPHLHPPDKSSPCHSQLLEAQTPEASQASPCPAVTPSAPSAALPDEGSRH
TPSPGLPAEGAPEAPRPSSPPPEVLEPHSLDQPPATSPRPLIEVGELLDLTRTFPSGGEEEAKGDAHLRP
TSLVQRRFSEGVLQSPSQDQEKLGGSLAALPQGQGSQLALDRPFGAESNWSLSQSFEWTFPTRPSGLGVW
RLDSPPPSPITEASEAAEAAEAGNLAVSSREEGVSQQGQGAGSAPSGSGSSWVQGDDPSMSLTQKGDGES
QPQFPAVPLEPLPTTEGTPGLPLQQAEERYESQEPLAGQESPLPLATREAALPILEPVLGQEQPAAPDQP
CVLFADAPEPGQALPVEEEAVTLARAETTQARTEAQDLCRASPEPPGPESSSRWLDDLLASPPPSGGGAR
RGAGAELKDTQSPSTCSEGLLGWSQKDLQSEFGITGDPQPSSFSPSSWCQGASQDYGLGGASPRGDPGLG
ERDWTSKYGQGAGEGSTREWASRCGIGQEEMEASSSQDQSKVSAPGVLTAQDRVVGKPAQLGTQRSQEAD
VQDWEFRKRDSQGTYSSRDAELQDQEFGKRDSLGTYSSRDVSLGDWEFGKRDSLGAYASQDANEQGQDLG
KRDHHGRYSSQDADEQDWEFQKRDVSLGTYGSRAAEPQEQEFGKSAWIRDYSSGGSSRTLDAQDRSFGTR
PLSSGFSPEEAQQQDEEFEKKIPSVEDSLGEGSRDAGRPGERGSGGLFSPSTAHVPDGALGQRDQSSWQN
SDASQEVGGHQERQQAGAQGPGSADLEDGEMGKRGWVGEFSLSVGPQREAAFSPGQQDWSRDFCIEASER
SYQFGIIGNDRVSGAGFSPSSKMEGGHFVPPGKTTAGSVDWTDQLGLRNLEVSSCVGSGGSSEARESAVG
QMGWSGGLSLRDMNLTGCLESGGSEEPGGIGVGEKDWTSDVNVKSKDLAEVGEGGGHSQARESGVGQTDW
SGVEAGEFLKSRERGVGQADWTPDLGLRNMAPGAVCSPGESKELGVGQMDWGNNLGLRDLEVTCDPDSGG
SQGLRGCGVGQMDWTQDLAPQNVELFGAPSEAREHGVGGVSQCPEPGLRHNGSLSPGLEARDPLEARELG
VGETSGPETQGEDYSSSSLEPHPADPGMETGEALSFGASPGRCPARPPPSGSQGLLEEMLAASSSKAVAR
RESAASGLGGLLEEEGAGAGAAQEEVLEPGRDSPPSWRPQPDGEASQTEDVDGTWGSSAARWSDQGPAQT
SRRPSQGPPARSPSQDFSFIEDTEILDSAMYRSRANLGRKRGHRAPVIRPGGTLGLSEAADSDAHLFQDS
TEPRASRVPSSDEEVVEEPQSRRTRMSLGTKGLKVNLFPGLSPSALKAKLRPRNRSAEEGELAESKSSQK
ESAVQRSKSCKVPGLGKPLTLPPKPEKSSGSEGSSPNWLQALKLKKKKV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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