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Report for CCDS32111.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32111.2 Public Homo sapiens 14 ADAM20 24 110 108 CCDS HistoryNCBI Gene:8748Re-query CCDS DB by CCDS ID:32111.2See the combined annotation on chromosome 14 in Sequence Viewer

Public Note for CCDS 32111.1
The coding region has been updated to shorten the N-terminus to one that is more supported by available conservation data and the prediction of a signal peptide.

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)


Attributes
CDS uses downstream AUG

Sequence IDs included in CCDS 32111.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000256389.5 ENSP00000256389.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000256389.5Link to Ensembl Protein Viewer:ENSP00000256389.3Re-query CCDS DB by Nucleotide ID:ENST00000256389Re-query CCDS DB by Protein ID:ENSP00000256389
Original member Current member NCBI NM_003814.5 NP_003805.4 MANE Select Accepted alive Link to Nucleotide Sequence:NM_003814.5Link to Protein Sequence:NP_003805.4Re-query CCDS DB by Nucleotide ID:NM_003814Re-query CCDS DB by Protein ID:NP_003805Link to BLAST:NP_003805.4

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_003805.4 726 O43506 726 100% 0 0

Chromosomal Locations for CCDS 32111.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 70522577 70524757 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2181 nt):
ATGGCAGTGGGTGAGCCCCTGGTGCACATCAGGGTCACTCTTCTGCTGCTCTGGTTTGGGATGTTTTTGT
CTATTTCTGGCCACTCTCAGGCCAGGCCCTCCCAGTATTTCACTTCTCCAGAAGTGGTGATCCCTTTGAA
GGTGATCAGCAGGGGCAGAGGTGCAAAGGCTCCTGGATGGCTCTCCTATAGCCTGCGGTTTGGGGGACAG
AGATACATTGTCCACATGAGGGTAAATAAGCTGTTGTTTGCTGCACACCTTCCTGTGTTCACCTACACAG
AGCAGCATGCCCTGCTCCAGGATCAGCCCTTCATCCAGGATGACTGCTACTACCATGGTTATGTGGAGGG
GGTCCCTGAGTCCTTGGTTGCCCTTAGTACCTGTTCTGGGGGCTTTCTTGGAATGCTACAGATAAATGAC
CTTGTTTATGAAATCAAGCCAATTAGTGTTTCTGCCACATTTGAACACCTAGTATATAAGATAGACAGTG
ATGATACACAGTTTCCACCTATGAGATGTGGGTTAACAGAAGAGAAAATAGCACACCAGATGGAGTTGCA
ATTGTCATATAATTTCACTCTGAAGCAAAGTTCTTTTGTGGGCTGGTGGACCCATCAGCGGTTTGTTGAG
CTGGTAGTGGTCGTGGATAATATTAGATATCTTTTCTCTCAAAGTAATGCAACAACAGTGCAGCATGAAG
TATTTAACGTTGTCAATATAGTGGATTCCTTCTATCATCCTTTGGAGGTTGATGTAATTTTGACTGGAAT
TGATATATGGACTGCATCAAATCCACTTCCTACCAGTGGAGACCTAGATAATGTTTTAGAGGACTTTTCT
ATTTGGAAGAATTATAACCTTAATAATCGACTACAACATGATGTTGCACATCTTTTCATAAAAGACACAC
AAGGCATGAAGCTTGGTGTTGCCTATGTTAAAGGAATATGCCAGAATCCTTTTAATACTGGAGTTGATGT
TTTTGAAGACAACAGGTTGGTCGTTTTTGCAATTACTTTGGGCCACGAGCTTGGTCATAATTTGGGTATG
CAACATGACACCCAGTGGTGTGTGTGCGAGCTACAGTGGTGCATAATGCATGCCTATAGAAAGGTGACAA
CTAAATTTAGCAACTGCAGTTATGCCCAATATTGGGACAGTACTATCAGTAGTGGATTATGTATTCAACC
GCCTCCATATCCAGGGAATATATTTAGACTGAAGTACTGTGGGAATCTAGTGGTTGAAGAAGGGGAGGAA
TGTGACTGTGGAACCATACGGCAGTGTGCAAAAGATCCCTGTTGTCTGTTAAACTGTACTCTACATCCTG
GGGCTGCTTGTGCTTTTGGAATATGTTGCAAAGACTGCAAATTTCTGCCATCAGGAACTTTATGTAGACA
ACAAGTTGGTGAATGTGACCTTCCAGAGTGGTGCAATGGGACATCCCATCAATGCCCAGATGATGTGTAT
GTGCAGGACGGGATCTCCTGTAATGTGAATGCCTTCTGCTATGAAAAGACGTGTAATAACCATGATATAC
AATGTAAAGAGATTTTTGGCCAAGATGCAAGGAGTGCATCTCAGAGTTGCTACCAAGAAATCAACACCCA
AGGAAACCGTTTCGGTCACTGTGGTATTGTAGGCACAACATATGTAAAATGTTGGACCCCTGATATCATG
TGTGGGAGGGTTCAGTGTGAAAATGTGGGAGTAATTCCCAATCTGATAGAGCATTCTACAGTGCAGCAGT
TTCACCTCAATGACACCACTTGCTGGGGCACTGATTATCATTTAGGGATGGCTATACCTGATATTGGTGA
GGTGAAAGATGGCACAGTATGTGGTCCAGAAAAGATCTGCATCCGTAAGAAGTGTGCCAGTATGGTTCAT
CTGTCACAAGCCTGTCAGCCTAAGACCTGCAACATGAGGGGAATCTGCAACAACAAACAACACTGTCACT
GCAACCATGAATGGGCACCCCCATACTGCAAGGACAAAGGCTATGGAGGTAGTGCTGATAGTGGCCCACC
TCCTAAGAACAACATGGAAGGATTAAATGTGATGGGAAAGTTGCGTTACCTGTCACTATTGTGCCTTCTT
CCTTTGGTTGCTTTTTTATTATTTTGCTTACATGTGCTTTTTAAGAAACGCACAAAAAGTAAAGAAGATG
AAGAAGGATAA

Translation (726 aa):
MAVGEPLVHIRVTLLLLWFGMFLSISGHSQARPSQYFTSPEVVIPLKVISRGRGAKAPGWLSYSLRFGGQ
RYIVHMRVNKLLFAAHLPVFTYTEQHALLQDQPFIQDDCYYHGYVEGVPESLVALSTCSGGFLGMLQIND
LVYEIKPISVSATFEHLVYKIDSDDTQFPPMRCGLTEEKIAHQMELQLSYNFTLKQSSFVGWWTHQRFVE
LVVVVDNIRYLFSQSNATTVQHEVFNVVNIVDSFYHPLEVDVILTGIDIWTASNPLPTSGDLDNVLEDFS
IWKNYNLNNRLQHDVAHLFIKDTQGMKLGVAYVKGICQNPFNTGVDVFEDNRLVVFAITLGHELGHNLGM
QHDTQWCVCELQWCIMHAYRKVTTKFSNCSYAQYWDSTISSGLCIQPPPYPGNIFRLKYCGNLVVEEGEE
CDCGTIRQCAKDPCCLLNCTLHPGAACAFGICCKDCKFLPSGTLCRQQVGECDLPEWCNGTSHQCPDDVY
VQDGISCNVNAFCYEKTCNNHDIQCKEIFGQDARSASQSCYQEINTQGNRFGHCGIVGTTYVKCWTPDIM
CGRVQCENVGVIPNLIEHSTVQQFHLNDTTCWGTDYHLGMAIPDIGEVKDGTVCGPEKICIRKKCASMVH
LSQACQPKTCNMRGICNNKQHCHCNHEWAPPYCKDKGYGGSADSGPPPKNNMEGLNVMGKLRYLSLLCLL
PLVAFLLFCLHVLFKKRTKSKEDEEG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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