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Report for CCDS8128.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8128.1 Public Homo sapiens 11 GAL3ST3 24 110 108 CCDS HistoryNCBI Gene:89792Re-query CCDS DB by CCDS ID:8128.1See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 8128.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000312006.5 ENSP00000308591.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000312006.5Link to Ensembl Protein Viewer:ENSP00000308591.3Re-query CCDS DB by Nucleotide ID:ENST00000312006Re-query CCDS DB by Protein ID:ENSP00000308591
Original member Current member EBI ENST00000527878.1 ENSP00000434829.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000527878.1Link to Ensembl Protein Viewer:ENSP00000434829.1Re-query CCDS DB by Nucleotide ID:ENST00000527878Re-query CCDS DB by Protein ID:ENSP00000434829
Original member Current member NCBI NM_033036.3 NP_149025.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_033036.3Link to Protein Sequence:NP_149025.1Re-query CCDS DB by Nucleotide ID:NM_033036Re-query CCDS DB by Protein ID:NP_149025Link to BLAST:NP_149025.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_149025.1 431 Q96A11 431 100% 0 0

Chromosomal Locations for CCDS 8128.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 66042507 66043677 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 66045291 66045415 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1296 nt):
ATGCCACCCATCCTCCAGCGCCTGCAGCAGGCCACCAAGATGATGAGCCGCCGGAAAATCCTGCTGCTGG
TGCTAGGGTGCAGCACCGTAAGCCTTCTCATCCACCAGGGGGCGCAGCTCAGCTGGTACCCCAAGCTGTT
CCCCTTGAGCTGCCCTCCTCTGCGGAACTCGCCGCCGCGCCCCAAGCACATGACTGTGGCCTTCCTGAAG
ACTCACAAGACGGCAGGCACGACGGTGCAGAACATCCTGTTTCGCTTTGCCGAGCGCCACAACCTGACGG
TGGCCCTGCCGCACCCGAGCTGCGAGCACCAGTTCTGCTACCCCCGCAACTTCTCGGCGCACTTCGTGCA
CCCGGCCACGCGGCCGCCGCACGTGCTGGCCAGCCACCTGCGCTTCGACCGTGCGGAGCTGGAGCGCCTC
ATGCCGCCCAGCACCGTCTATGTCACCATCCTGCGCGAGCCGGCCGCCATGTTCGAGTCGCTCTTCAGCT
ACTACAACCAGTACTGCCCGGCCTTCCGGCGCGTACCCAACGCCTCGCTCGAGGCCTTCCTGCGCGCGCC
CGAGGCATACTACCGCGCTGGCGAGCACTTCGCCATGTTCGCACACAACACGCTGGCCTACGACCTGGGC
GGCGACAATGAGCGCAGCCCGCGCGACGACGCCGCCTACCTGGCGGGCCTCATCCGCCAGGTGGAGGAGG
TTTTCTCGCTCGTCATGATCGCCGAGTACTTCGACGAGTCGCTAGTGCTGCTGCGGCGCCTACTGGCCTG
GGACCTGGACGACGTGCTCTACGCCAAGCTCAACGCGCGCGCCGCCAGCTCGCGCCTGGCCGCCATCCCC
GCGGCGCTGGCGCGGGCGGCGCGCACCTGGAACGCCCTGGACGCCGGCCTCTACGACCACTTCAACGCCA
CCTTCTGGCGCCACGTGGCGCGCGCGGGCCGCGCGTGCGTGGAGCGCGAGGCGCGCGAGCTGCGCGAGGC
CCGCCAGCGCCTACTGCGGCGCTGCTTCGGGGACGAGCCACTGCTGCGGCCTGCCGCGCAGATCCGCACC
AAGCAGCTGCAGCCGTGGCAGCCCAGCCGCAAGGTGGACATTATGGGCTATGACCTGCCCGGCGGCGGCG
CCGGCCCGGCCACCGAGGCCTGCCTCAAGCTGGCCATGCCCGAGGTCCAGTACTCGAACTACCTGTTGCG
CAAGCAGAAGCGCCGGGGCGGTGCGCGGGCTCGGCCCGAGCCCGTCCTGGACAATCCCCCGCCTCGGCCC
ATCCGAGTGCTGCCTCGCGGCCCTCAAGGTCCCTGA

Translation (431 aa):
MPPILQRLQQATKMMSRRKILLLVLGCSTVSLLIHQGAQLSWYPKLFPLSCPPLRNSPPRPKHMTVAFLK
THKTAGTTVQNILFRFAERHNLTVALPHPSCEHQFCYPRNFSAHFVHPATRPPHVLASHLRFDRAELERL
MPPSTVYVTILREPAAMFESLFSYYNQYCPAFRRVPNASLEAFLRAPEAYYRAGEHFAMFAHNTLAYDLG
GDNERSPRDDAAYLAGLIRQVEEVFSLVMIAEYFDESLVLLRRLLAWDLDDVLYAKLNARAASSRLAAIP
AALARAARTWNALDAGLYDHFNATFWRHVARAGRACVEREARELREARQRLLRRCFGDEPLLRPAAQIRT
KQLQPWQPSRKVDIMGYDLPGGGAGPATEACLKLAMPEVQYSNYLLRKQKRRGGARARPEPVLDNPPPRP
IRVLPRGPQGP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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