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Report for CCDS14459.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14459.1 Public Homo sapiens X TGIF2LX 24 110 108 CCDS HistoryNCBI Gene:90316Re-query CCDS DB by CCDS ID:14459.1See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14459.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000283891.6 ENSP00000355119.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000283891.6Link to Ensembl Protein Viewer:ENSP00000355119.4Re-query CCDS DB by Nucleotide ID:ENST00000283891Re-query CCDS DB by Protein ID:ENSP00000355119
Original member Current member EBI ENST00000561129.2 ENSP00000453704.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000561129.2Link to Ensembl Protein Viewer:ENSP00000453704.1Re-query CCDS DB by Nucleotide ID:ENST00000561129Re-query CCDS DB by Protein ID:ENSP00000453704
Original member Current member NCBI NM_138960.4 NP_620410.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_138960.4Link to Protein Sequence:NP_620410.3Re-query CCDS DB by Nucleotide ID:NM_138960Re-query CCDS DB by Protein ID:NP_620410Link to BLAST:NP_620410.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_620410.3 241 Q8IUE1 241 100% 0 0

Chromosomal Locations for CCDS 14459.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 89922086 89922811 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (726 nt):
ATGGAGGCCGCTGCGGACGGCCCGGCTGAGACCCAAAGCCCGGTGGAAAAAGACAGCCCGGCGAAGACCC
AAAGCCCAGCCCAAGACACCTCAATCATGTCGAGAAATAACGCAGATACAGGCAGAGTTCTTGCCTTACC
AGAGCACAAGAAGAAGCGCAAGGGAAACTTGCCAGCCGAGTCCGTTAAGATCCTCCGCGACTGGATGTAT
AAGCATCGGTTTAAGGCCTACCCTTCAGAAGAAGAGAAGCAAATGCTGTCAGAGAAGACCAATTTGTCTT
TGTTGCAGATTTCTAACTGGTTTATCAATGCTCGCAGACGCATTCTCCCGGATATGCTTCAACAGCGTAG
AAACGACCCCATCATTGGCCACAAAACGGGCAAAGATGCCCATGCCACCCACCTGCAGAGCACCGAGGCG
TCTGTGCCGGCCAAGTCAGGGCCCAGTGGTCCAGACAATGTACAAAGCCTGCCCCTGTGGCCCTTGCCAA
AGGGCCAGATGTCAAGAGAGAAGCAACCAGATCCGGAGTCGGCCCCTAGCCAGAAGCTCACCGGAATAGC
CCAGCCGAAGAAAAAGGTCAAGGTTTCTGTCACATCCCCGTCTTCTCCAGAACTTGTGTCTCCAGAGGAG
CACGCCGACTTCAGCAGCTTCCTGCTGCTAGTCGATGCAGCAGTACAAAGGGCTGCCGAGCTGGAGCTAG
AGAAGAAGCAAGAGCCTAATCCATGA

Translation (241 aa):
MEAAADGPAETQSPVEKDSPAKTQSPAQDTSIMSRNNADTGRVLALPEHKKKRKGNLPAESVKILRDWMY
KHRFKAYPSEEEKQMLSEKTNLSLLQISNWFINARRRILPDMLQQRRNDPIIGHKTGKDAHATHLQSTEA
SVPAKSGPSGPDNVQSLPLWPLPKGQMSREKQPDPESAPSQKLTGIAQPKKKVKVSVTSPSSPELVSPEE
HADFSSFLLLVDAAVQRAAELELEKKQEPNP


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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