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Report for CCDS32054.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32054.1 Public Homo sapiens 14 CARMIL3 24 110 108 CCDS HistoryNCBI Gene:90668Re-query CCDS DB by CCDS ID:32054.1See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32054.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000342740.6 ENSP00000340467.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000342740.6Link to Ensembl Protein Viewer:ENSP00000340467.5Re-query CCDS DB by Nucleotide ID:ENST00000342740Re-query CCDS DB by Protein ID:ENSP00000340467
Original member Current member NCBI NM_138360.4 NP_612369.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_138360.4Link to Protein Sequence:NP_612369.3Re-query CCDS DB by Nucleotide ID:NM_138360Re-query CCDS DB by Protein ID:NP_612369Link to BLAST:NP_612369.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_612369.3 1372 Q8ND23-1 1372 100% 0 0

Chromosomal Locations for CCDS 32054.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 24052154 24052193 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24053709 24053803 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24054088 24054138 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24054242 24054301 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24054396 24054511 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24054711 24054808 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24055066 24055136 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24055237 24055310 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24055543 24055618 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24055701 24055789 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24056299 24056393 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24056622 24056708 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24056915 24057024 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24057167 24057244 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24057803 24057879 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24057960 24058064 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24058155 24058224 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24058680 24058761 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24058890 24058986 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24059135 24059189 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24059270 24059442 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24059664 24059732 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24059970 24060063 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24060157 24060255 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24060628 24060756 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24060927 24061040 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24061497 24061672 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24062480 24062567 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24062709 24062846 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24063120 24063183 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24063325 24063533 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24064246 24064346 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24064958 24065273 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24065622 24065750 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24066398 24066464 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24066567 24066656 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24068584 24068702 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24068786 24068966 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24069137 24069247 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24069379 24069404 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4119 nt):
ATGGCCAAGCCCAGCGTGGAGCTCACCCGCGAGTTGCAAGACAGCATCCGGAGGTGCCTGAGCCAAGGGG
CCGTGCTCCAACAACATCATGTGAAGTTGGAGACAAAGCCCAAGAAGTTTGAGGACCGAGTGCTGGCCCT
GACCTCCTGGCGCCTCCACCTCTTCCTCCTTAAAGTCCCGGCCAAGGTGGAGAGCTCCTTCAATGTCCTG
GAGATCCGTGCCTTCAACACGCTCAGTCAGAATCAGATCCTGGTGGAGACGGAGCGTGGCATGGTGAGCA
TGCGACTGCCATCAGCTGAAAGTGTGGACCAGGTGACACGACATGTGAGCTCTGCCCTGTCCAAGGTCTG
CCCTGGCCCTGGGTGTTTGATCCGGCGTGGAAACGCAGACACCCCAGAGGGGCCCCGAGATACATCCCCC
AACTCTGAGACTTCCACATCTACCACCCACAGTGTCTGCGGTGGCTTCTCTGAGACCTACGCTGCTCTGT
GTGACTACAATGGGCTACACTGCCGTGAGGAGGTTCAATGGGATGTGGACACCATCTACCATGCTGAAGA
TAACCGGGAGTTCAATCTTTTGGATTTCAGCCACTTGGAGAGCCGAGACTTGGCCCTAATGGTAGCAGCC
CTGGCCTACAACCAGTGGTTCACCAAACTCTACTGCAAGGACTTGCGGCTGGGCTCTGAAGTGCTAGAAC
AGGTGCTACATACCCTAAGCAAGTCGGGGAGCCTCGAAGAGCTGGTGCTGGACAACGCCGGGCTTAAGAC
GGACTTTGTCCAGAAGCTGGCCGGGGTGTTTGGGGAGAACGGGAGCTGTGTGCTGCATGCCCTCACTCTG
TCCCACAACCCCATCGAGGACAAGGGTTTTCTCAGTCTGAGCCAGCAGCTCCTCTGCTTCCCCTCTGGCC
TCACCAAACTGTGCCTGGCCAAGACTGCCATTTCCCCTCGAGGGCTCCAGGCACTCGGCCAGACCTTCGG
GGCAAACCCAGCATTTGCCAGCTCCCTTCGATACCTGGACCTGAGCAAGAATCCTGGGCTCCTCGCCACG
GATGAGGCCAATGCCCTCTACAGTTTCCTGGCCCAACCCAACGCCCTGGTGCACCTGGACCTGTCAGGAA
CTGACTGCGTCATCGACTTGCTTCTCGGTGCCCTGCTCCACGGCTGCTGCTCCCACCTCACCTACCTCAA
CCTGGCTCGCAACAGCTGCTCCCACAGGAAGGGTCGAGAGGCCCCGCCGGCCTTCAAGCAGTTCTTCAGC
AGCGCCTACACACTGAGCCACGTCAATCTGTCGGCCACAAAGCTGCCCCTGGAGGCCCTCAGGGCGCTGC
TTCAGGGCCTCTCCCTCAACAGTCACCTCAGTGACCTGCACCTGGATCTCAGCAGCTGCGAGCTCCGTTC
AGCGGGAGCCCAAGCCTTGCAGGAGCAGCTGGGAGCTGTCACCTGTGTAGGCAGCCTGGATCTGTCAGAC
AATGGGTTCGACTCGGACCTCCTGACACTGGTGCCTGCACTTGGCAAGAACAAGTCCCTCAAGCACCTGT
TTTTGGGCAAGAACTTCAATGTCAAGGCCAAGACCCTGGAGGAGATCCTCCACAAGCTGGTGCAGCTGAT
CCAGGAAGAGGACTGTTCCCTGCAGTCACTGTCGGTGGCAGACTCCCGGCTGAAGCTTCGCACCAGCATC
CTCATCAATGCCCTGGGCAGCAACACCTGCCTGGCCAAGGTGGATCTGAGCGGCAATGGCATGGAGGACA
TCGGGGCCAAGATGCTGTCTAAGGCCCTGCAGATAAACTCCTCCCTCAGAACTATCCTATGGGATCGGAA
CAATACATCTGCCCTGGGCTTCCTGGACATCGCAAGGGCCCTGGAGAGCAACCACACGCTGCGCTTCATG
TCCTTCCCCGTGAGCGACATCTCCCAAGCCTATCGCAGCGCGCCTGAGCGCACCGAGGACGTCTGGCAGA
AGATCCAATGGTGCTTAGTGAGGAACAACCACTCCCAGACGTGCCCCCAGGAGCAGGCCTTCAGGTTGCA
GCAGGGCCTGGTGACCAGCAGCGCCGAGCAAATGCTGCAGCGGCTGTGTGGACGAGTGCAGGAGGAGGTG
CGGGCCCTGAGACTATGCCCCCTGGAGCCTGTGCAGGATGAGCTACTCTACGCTCGGGACCTCATCAAAG
ATGCCAAGAACTCCCGGGCGCTGTTTCCCAGCCTCTATGAGCTGGGCCACGTGCTGGCCAATGATGGGCC
TGTGCGGCAGAGGCTGGAATCAGTAGCAAGTGAGGTGTCCAAAGCTGTGGACAAGGAGCTGCAGGTGATC
CTGGAGTCCATGGTCAGCCTGACACAGGAGTTATGCCCTGTGGCCATGCGGGTGGCCGAGGGACACAACA
AGATGCTGAGCAATGTGGCGGAGCGTGTCACTGTGCCCCGGAACTTCATCCGAGGGGCACTGCTGGAGCA
AGCAGGACAGGACATTCAGAACAAGCTGGATGAAGTGAAGCTCTCAGTCGTCACCTACCTAACCAGCTCC
ATAGTGGATGAGATCCTGCAAGAGCTCTACCATTCCCACAAGAGCCTGGCCCGGCACCTGACCCAGCTAA
GGACGCTGTCAGATCCACCAGGGTGCCCAGGCCAAGGGCAGGATCTGTCCTCCCGGGGCCGAGGCCGGAA
CCATGACCATGAGGAGACCACAGATGATGAACTTGGGACCAACATTGACACCATGGCCATCAAAAAGCAG
AAACGCTGCCGCAAGATTCGGCCGGTGTCTGCCTTCATCAGCGGGAGCCCTCAGGACATGGAAAGCCAAC
TGGGGAATCTGGGGATCCCCCCTGGCTGGTTCTCAGGACTTGGGGGCAGCCAGCCCACAGCTAGTGGCTC
CTGGGAAGGTCTATCTGAGCTGCCCACTCATGGTTACAAACTAAGGCATCAAACACAAGGGAGGCCCCGC
CCCCCCAGGACCACACCTCCAGGACCTGGTCGACCCAGTATGCCAGCACCTGGGACTCGTCAGGAGAATG
GGATGGCCACCCGCCTGGATGAAGGGCTGGAGGACTTCTTCAGCCGAAGGGTCCTGGAGGAAAGTTCTAG
CTACCCCCGGACTCTGAGGACCGTGCGGCCAGGACTCTCGGAGGCACCGCTGCCTCCACTCCAGAAGAAG
AGGCGCCGGGGCCTGTTTCACTTTCGCCGGCCCCGGAGCTTCAAGGGGGACAGGGGGCCGGGGTCCCCTA
CCACTGGACTCCTCCTCCCTCCACCCCCACCCCCTCCCCCGACTCAGGAGAGCCCCCCTAGCCCAGACCC
CCCAAGCCTCGGCAATAACTCCTCTCCCTGCTGGAGCCCAGAGGAGGAGAGCAGCCTCCTCCCTGGATTT
GGTGGGGGCCGGGGACCTTCCTTCCGCCGGAAGATGGGCACTGAGGGGTCAGAGCCAGGGGAGGGGGGCC
CAGCCCCTGGGACAGCACAGCAGCCAAGGGTTCACGGTGTTGCCCTTCCCGGGTTGGAAAGAGCCAAGGG
TTGGAGCTTCGATGGGAAACGAGAGGGCCCAGGCCCAGACCAGGAGGGCAGCACCCAGGCCTGGCAGAAA
CGGCGCTCTTCAGACGACGCAGGGCCTGGATCCTGGAAGCCCCCACCACCGCCCCAAAGCACCAAACCAA
GCTTCAGCGCCATGCGCAGAGCAGAGGCCACATGGCACATAGCTGAAGAGAGTGCCCCCAACCACAGCTG
CCAGAGTCCCAGCCCAGCCTCCCAAGATGGGGAAGAGGAGAAGGAGGGGACCCTCTTCCCAGAGAGGACA
CTTCCAGCTAGGAATGCCAAGCTACAGGACCCCGCTCTAGCTCCATGGCCTCCCAAGCCAGTGGCTGTGC
CCAGGGGCCGCCAGCCTCCCCAGGAGCCAGGGGTCAGGGAGGAGGCTGAGGCTGGAGATGCAGCTCCAGG
AGTCAACAAACCCCGGCTGAGGCTGAGCTCACAGCAAGACCAAGAGGAGCCCGAAGTCCAAGGGCCCCCT
GATCCAGGCCGGCGGACTGCCCCCCTGAAGCCCAAGAGGACACGGCGGGCACAGTCCTGTGACAAGCTGG
AACCTGATAGAAGACGGCCTCCTGACCCCACAGGAACCAGTGAGCCAGGAACAGACTGA

Translation (1372 aa):
MAKPSVELTRELQDSIRRCLSQGAVLQQHHVKLETKPKKFEDRVLALTSWRLHLFLLKVPAKVESSFNVL
EIRAFNTLSQNQILVETERGMVSMRLPSAESVDQVTRHVSSALSKVCPGPGCLIRRGNADTPEGPRDTSP
NSETSTSTTHSVCGGFSETYAALCDYNGLHCREEVQWDVDTIYHAEDNREFNLLDFSHLESRDLALMVAA
LAYNQWFTKLYCKDLRLGSEVLEQVLHTLSKSGSLEELVLDNAGLKTDFVQKLAGVFGENGSCVLHALTL
SHNPIEDKGFLSLSQQLLCFPSGLTKLCLAKTAISPRGLQALGQTFGANPAFASSLRYLDLSKNPGLLAT
DEANALYSFLAQPNALVHLDLSGTDCVIDLLLGALLHGCCSHLTYLNLARNSCSHRKGREAPPAFKQFFS
SAYTLSHVNLSATKLPLEALRALLQGLSLNSHLSDLHLDLSSCELRSAGAQALQEQLGAVTCVGSLDLSD
NGFDSDLLTLVPALGKNKSLKHLFLGKNFNVKAKTLEEILHKLVQLIQEEDCSLQSLSVADSRLKLRTSI
LINALGSNTCLAKVDLSGNGMEDIGAKMLSKALQINSSLRTILWDRNNTSALGFLDIARALESNHTLRFM
SFPVSDISQAYRSAPERTEDVWQKIQWCLVRNNHSQTCPQEQAFRLQQGLVTSSAEQMLQRLCGRVQEEV
RALRLCPLEPVQDELLYARDLIKDAKNSRALFPSLYELGHVLANDGPVRQRLESVASEVSKAVDKELQVI
LESMVSLTQELCPVAMRVAEGHNKMLSNVAERVTVPRNFIRGALLEQAGQDIQNKLDEVKLSVVTYLTSS
IVDEILQELYHSHKSLARHLTQLRTLSDPPGCPGQGQDLSSRGRGRNHDHEETTDDELGTNIDTMAIKKQ
KRCRKIRPVSAFISGSPQDMESQLGNLGIPPGWFSGLGGSQPTASGSWEGLSELPTHGYKLRHQTQGRPR
PPRTTPPGPGRPSMPAPGTRQENGMATRLDEGLEDFFSRRVLEESSSYPRTLRTVRPGLSEAPLPPLQKK
RRRGLFHFRRPRSFKGDRGPGSPTTGLLLPPPPPPPPTQESPPSPDPPSLGNNSSPCWSPEEESSLLPGF
GGGRGPSFRRKMGTEGSEPGEGGPAPGTAQQPRVHGVALPGLERAKGWSFDGKREGPGPDQEGSTQAWQK
RRSSDDAGPGSWKPPPPPQSTKPSFSAMRRAEATWHIAEESAPNHSCQSPSPASQDGEEEKEGTLFPERT
LPARNAKLQDPALAPWPPKPVAVPRGRQPPQEPGVREEAEAGDAAPGVNKPRLRLSSQQDQEEPEVQGPP
DPGRRTAPLKPKRTRRAQSCDKLEPDRRRPPDPTGTSEPGTD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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