NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS11879.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11879.1 Public Homo sapiens 18 ANKRD29 24 110 108 CCDS HistoryNCBI Gene:147463Re-query CCDS DB by CCDS ID:11879.1Re-query CCDS DB by GeneID:147463See the combined annotation on chromosome 18 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 11879.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000592179.6 ENSP00000468354.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000592179.6Link to Ensembl Protein Viewer:ENSP00000468354.1Re-query CCDS DB by Nucleotide ID:ENST00000592179Re-query CCDS DB by Protein ID:ENSP00000468354
Original member Current member NCBI NM_173505.4 NP_775776.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_173505.4Link to Protein Sequence:NP_775776.2Re-query CCDS DB by Nucleotide ID:NM_173505Re-query CCDS DB by Protein ID:NP_775776Link to BLAST:NP_775776.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_775776.2 301 Q8N6D5-1 301 100% 0 0

Chromosomal Locations for CCDS 11879.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 18 (NC_000018.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18See the combined annotation on chromosome 18 in Sequence Viewer

Chromosome Start Stop Links
18 23601226 23601309 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 23612092 23612190 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 23617732 23617827 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 23619531 23619629 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 23629853 23629951 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 23634051 23634149 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 23638849 23638947 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 23646189 23646287 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 23649083 23649193 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 23662710 23662730 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (906 nt):
ATGTGCAGGATGTCCTTCAAGAAGGAAACTCCACTTGCCAATGCTGCATTCTGGGCAGCCAGGAGAGGAA
ACCTGGCGCTGCTGAAGCTGCTGTTGAACAGCGGCCGGGTGGACGTGGACTGCAGAGACAGCCATGGCAC
CACACTCCTGATGGTTGCTGCCTACGCTGGCCACATAGACTGTGTGAGGGAACTGGTTCTGCAAGGAGCA
GACATCAATCTCCAGAGAGAGTCAGGTACAACTGCCCTATTCTTTGCCGCCCAGCAAGGCCATAATGATG
TCGTGAGATTTCTCTTTGGATTTGGAGCATCCACTGAATTTAGGACCAAAGACGGGGGCACCGCCCTGTT
GGCTGCCAGTCAGTACGGGCACATGCAGGTGGTGGAGACCTTGCTGAAGCACGGAGCAAACATCCATGAC
CAACTTTATGATGGAGCCACTGCCCTCTTCCTAGCTGCCCAAGGTGGTTACTTGGATGTTATTCGATTAC
TGCTGGCTTCAGGAGCAAAAGTCAACCAGCCAAGGCAGGACGGGACAGCGCCCCTGTGGATCGCGTCCCA
GATGGGCCACAGCGAGGTGGTGCGGGTGATGCTGCTGCGCGGAGCCGACCGCGACGCTGCGCGGAACGAT
GGCACAACAGCATTATTGAAAGCAGCCAACAAAGGGTATAATGATGTCATAAAAGAGTTGCTTAAATTCT
CACCCACTCTTGGTATTTTGAAGAATGGGACATCAGCGCTCCATGCAGCAGTGCTCAGTGGAAACATTAA
AACAGTTGCGCTGCTCCTAGAAGCAGGGGCAGACCCATCCCTGAGAAACAAGGCCAATGAACTTCCGGCA
GAACTAACCAAAAATGAACGTATATTGCGTCTCCTGAGAAGTAAAGAAGGTCCCAGAAAGAGCTAA

Translation (301 aa):
MCRMSFKKETPLANAAFWAARRGNLALLKLLLNSGRVDVDCRDSHGTTLLMVAAYAGHIDCVRELVLQGA
DINLQRESGTTALFFAAQQGHNDVVRFLFGFGASTEFRTKDGGTALLAASQYGHMQVVETLLKHGANIHD
QLYDGATALFLAAQGGYLDVIRLLLASGAKVNQPRQDGTAPLWIASQMGHSEVVRVMLLRGADRDAARND
GTTALLKAANKGYNDVIKELLKFSPTLGILKNGTSALHAAVLSGNIKTVALLLEAGADPSLRNKANELPA
ELTKNERILRLLRSKEGPRKS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH