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Report for CCDS11687.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11687.1 Public Homo sapiens 17 KCNJ16 24 110 108 CCDS HistoryNCBI Gene:3773Re-query CCDS DB by CCDS ID:11687.1Re-query CCDS DB by GeneID:3773See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)


Attributes
CDS uses downstream AUG

Sequence IDs included in CCDS 11687.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000283936.5 ENSP00000283936.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000283936.5Link to Ensembl Protein Viewer:ENSP00000283936.1Re-query CCDS DB by Nucleotide ID:ENST00000283936Re-query CCDS DB by Protein ID:ENSP00000283936
Original member Current member EBI ENST00000392670.5 ENSP00000376438.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000392670.5Link to Ensembl Protein Viewer:ENSP00000376438.1Re-query CCDS DB by Nucleotide ID:ENST00000392670Re-query CCDS DB by Protein ID:ENSP00000376438
Original member Current member EBI ENST00000392671.6 ENSP00000376439.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000392671.6Link to Ensembl Protein Viewer:ENSP00000376439.1Re-query CCDS DB by Nucleotide ID:ENST00000392671Re-query CCDS DB by Protein ID:ENSP00000376439
Original member Current member EBI ENST00000589377.1 ENSP00000465967.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000589377.1Link to Ensembl Protein Viewer:ENSP00000465967.1Re-query CCDS DB by Nucleotide ID:ENST00000589377Re-query CCDS DB by Protein ID:ENSP00000465967
Original member Current member EBI ENST00000615244.4 ENSP00000479817.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000615244.4Link to Ensembl Protein Viewer:ENSP00000479817.1Re-query CCDS DB by Nucleotide ID:ENST00000615244Re-query CCDS DB by Protein ID:ENSP00000479817
Original member Current member NCBI NM_001270422.2 NP_001257351.1 Accepted alive Link to Nucleotide Sequence:NM_001270422.2Link to Protein Sequence:NP_001257351.1Re-query CCDS DB by Nucleotide ID:NM_001270422Re-query CCDS DB by Protein ID:NP_001257351Link to BLAST:NP_001257351.1
Original member Current member NCBI NM_001291622.3 NP_001278551.2 Accepted alive Link to Nucleotide Sequence:NM_001291622.3Link to Protein Sequence:NP_001278551.2Re-query CCDS DB by Nucleotide ID:NM_001291622Re-query CCDS DB by Protein ID:NP_001278551Link to BLAST:NP_001278551.2
Original member Current member NCBI NM_001291623.2 NP_001278552.2 Accepted alive Link to Nucleotide Sequence:NM_001291623.2Link to Protein Sequence:NP_001278552.2Re-query CCDS DB by Nucleotide ID:NM_001291623Re-query CCDS DB by Protein ID:NP_001278552Link to BLAST:NP_001278552.2
Original member Current member NCBI NM_001291624.1 NP_001278553.1 Accepted alive Link to Nucleotide Sequence:NM_001291624.1Link to Protein Sequence:NP_001278553.1Re-query CCDS DB by Nucleotide ID:NM_001291624Re-query CCDS DB by Protein ID:NP_001278553Link to BLAST:NP_001278553.1
Original member Current member NCBI NM_001291625.1 NP_001278554.1 Accepted alive Link to Nucleotide Sequence:NM_001291625.1Link to Protein Sequence:NP_001278554.1Re-query CCDS DB by Nucleotide ID:NM_001291625Re-query CCDS DB by Protein ID:NP_001278554Link to BLAST:NP_001278554.1
Original member Current member NCBI NM_018658.4 NP_061128.3 Accepted alive Link to Nucleotide Sequence:NM_018658.4Link to Protein Sequence:NP_061128.3Re-query CCDS DB by Nucleotide ID:NM_018658Re-query CCDS DB by Protein ID:NP_061128Link to BLAST:NP_061128.3
Original member Current member NCBI NM_170741.4 NP_733937.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_170741.4Link to Protein Sequence:NP_733937.3Re-query CCDS DB by Nucleotide ID:NM_170741Re-query CCDS DB by Protein ID:NP_733937Link to BLAST:NP_733937.3
Original member Current member NCBI NM_170742.3 NP_733938.3 Accepted alive Link to Nucleotide Sequence:NM_170742.3Link to Protein Sequence:NP_733938.3Re-query CCDS DB by Nucleotide ID:NM_170742Re-query CCDS DB by Protein ID:NP_733938Link to BLAST:NP_733938.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001257351.1 418 Q9NPI9 418 100% 0 0
NP_001278551.2 418 Q9NPI9 418 100% 0 0
NP_001278552.2 418 Q9NPI9 418 100% 0 0
NP_001278553.1 418 Q9NPI9 418 100% 0 0
NP_001278554.1 418 Q9NPI9 418 100% 0 0
NP_061128.3 418 Q9NPI9 418 100% 0 0
NP_733937.3 418 Q9NPI9 418 100% 0 0
NP_733938.3 418 Q9NPI9 418 100% 0 0

Chromosomal Locations for CCDS 11687.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 70132088 70133344 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1257 nt):
ATGAGCTATTACGGCAGCAGCTATCATATTATCAATGCGGACGCAAAATACCCAGGCTACCCGCCAGAGC
ACATTATAGCTGAGAAGAGAAGAGCAAGAAGACGATTACTTCACAAAGATGGCAGCTGTAATGTCTACTT
CAAGCACATTTTTGGAGAATGGGGAAGCTATGTGGTTGACATCTTCACCACTCTTGTGGACACCAAGTGG
CGCCATATGTTTGTGATATTTTCTTTATCTTATATTCTCTCGTGGTTGATATTTGGCTCTGTCTTTTGGC
TCATAGCCTTTCATCATGGCGATCTATTAAATGATCCAGACATCACACCTTGTGTTGACAACGTCCATTC
TTTCACAGGGGCCTTTTTGTTCTCCCTAGAGACCCAAACCACCATAGGATATGGTTATCGCTGTGTTACT
GAAGAATGTTCTGTGGCCGTGCTCATGGTGATCCTCCAGTCCATCTTAAGTTGCATCATAAATACCTTTA
TCATTGGAGCTGCCTTGGCCAAAATGGCAACTGCTCGAAAGAGAGCCCAAACCATTCGTTTCAGCTACTT
TGCACTTATAGGTATGAGAGATGGGAAGCTTTGCCTCATGTGGCGCATTGGTGATTTTCGGCCAAACCAC
GTGGTAGAAGGAACAGTTAGAGCCCAACTTCTCCGCTATACAGAAGACAGTGAAGGGAGGATGACGATGG
CATTTAAAGACCTCAAATTAGTCAACGACCAAATCATCCTGGTCACCCCGGTAACTATTGTCCATGAAAT
TGACCATGAGAGCCCTCTGTATGCCCTTGACCGCAAAGCAGTAGCCAAAGATAACTTTGAGATTTTGGTG
ACATTTATCTATACTGGTGATTCCACTGGAACATCTCACCAATCTAGAAGCTCCTATGTTCCCCGAGAAA
TTCTCTGGGGCCATAGGTTTAATGATGTCTTGGAAGTTAAGAGGAAGTATTACAAAGTGAACTGCTTACA
GTTTGAAGGAAGTGTGGAAGTATATGCCCCCTTTTGCAGTGCCAAGCAATTGGACTGGAAAGACCAGCAG
CTCCACATAGAAAAAGCACCACCAGTTCGAGAATCCTGCACGTCGGACACCAAGGCGAGACGAAGGTCAT
TTAGTGCAGTTGCCATTGTCAGCAGCTGTGAAAACCCTGAGGAGACCACCACTTCCGCCACACATGAATA
TAGGGAAACACCTTATCAGAAAGCTCTCCTGACTTTAAACAGAATCTCTGTAGAATCCCAAATGTAG

Translation (418 aa):
MSYYGSSYHIINADAKYPGYPPEHIIAEKRRARRRLLHKDGSCNVYFKHIFGEWGSYVVDIFTTLVDTKW
RHMFVIFSLSYILSWLIFGSVFWLIAFHHGDLLNDPDITPCVDNVHSFTGAFLFSLETQTTIGYGYRCVT
EECSVAVLMVILQSILSCIINTFIIGAALAKMATARKRAQTIRFSYFALIGMRDGKLCLMWRIGDFRPNH
VVEGTVRAQLLRYTEDSEGRMTMAFKDLKLVNDQIILVTPVTIVHEIDHESPLYALDRKAVAKDNFEILV
TFIYTGDSTGTSHQSRSSYVPREILWGHRFNDVLEVKRKYYKVNCLQFEGSVEVYAPFCSAKQLDWKDQQ
LHIEKAPPVRESCTSDTKARRRSFSAVAIVSSCENPEETTTSATHEYRETPYQKALLTLNRISVESQM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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