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Report for CCDS43659.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
43659.1 Public Homo sapiens 7 DENND2A 24 110 108 CCDS HistoryNCBI Gene:27147Re-query CCDS DB by CCDS ID:43659.1Re-query CCDS DB by GeneID:27147See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 43659.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000275884.10 ENSP00000275884.6 Accepted alive Link to Ensembl Transcript Viewer:ENST00000275884.10Link to Ensembl Protein Viewer:ENSP00000275884.6Re-query CCDS DB by Nucleotide ID:ENST00000275884Re-query CCDS DB by Protein ID:ENSP00000275884
Original member Current member EBI ENST00000496613.6 ENSP00000419654.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000496613.6Link to Ensembl Protein Viewer:ENSP00000419654.1Re-query CCDS DB by Nucleotide ID:ENST00000496613Re-query CCDS DB by Protein ID:ENSP00000419654
Original member Current member EBI ENST00000537639.5 ENSP00000442245.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000537639.5Link to Ensembl Protein Viewer:ENSP00000442245.1Re-query CCDS DB by Nucleotide ID:ENST00000537639Re-query CCDS DB by Protein ID:ENSP00000442245
Original member Current member NCBI NM_001318052.2 NP_001304981.1 Accepted alive Link to Nucleotide Sequence:NM_001318052.2Link to Protein Sequence:NP_001304981.1Re-query CCDS DB by Nucleotide ID:NM_001318052Re-query CCDS DB by Protein ID:NP_001304981Link to BLAST:NP_001304981.1
Original member Current member NCBI NM_001362678.2 NP_001349607.1 Accepted alive Link to Nucleotide Sequence:NM_001362678.2Link to Protein Sequence:NP_001349607.1Re-query CCDS DB by Nucleotide ID:NM_001362678Re-query CCDS DB by Protein ID:NP_001349607Link to BLAST:NP_001349607.1
Original member Current member NCBI NM_015689.5 NP_056504.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_015689.5Link to Protein Sequence:NP_056504.3Re-query CCDS DB by Nucleotide ID:NM_015689Re-query CCDS DB by Protein ID:NP_056504Link to BLAST:NP_056504.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001304981.1 1009 Q9ULE3-1 1009 100% 0 0
NP_001349607.1 1009 Q9ULE3-1 1009 100% 0 0
NP_056504.3 1009 Q9ULE3-1 1009 100% 0 0

Chromosomal Locations for CCDS 43659.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 140518707 140518738 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 140519632 140519718 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 140521855 140522100 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 140523307 140523424 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 140525751 140525792 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 140527318 140527495 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 140544618 140544766 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 140546799 140546939 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 140555636 140555713 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 140558143 140558212 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 140559708 140559817 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 140567086 140567273 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 140568763 140568813 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 140569645 140569738 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 140573808 140574008 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 140585589 140585710 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 140587653 140587780 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 140601403 140602397 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3030 nt):
ATGGATATGTTCAGCTTGGATATGATCATCAGTGACCCAGCTGCAGAAGCCAGCAGGGCTGGGAAGAAGC
AGCTCAGAGGTGTTCAGAACCCTTGCCCATCTGCCAGAGCCAGACCCCGGCACAAGTCCCTCAACATAAA
GGACAAGATATCAGAATGGGAAGGGAAGAAAGAGGTGCCCACTCCTGCACCCAGCAGGAGAGCAGACGGA
CAGGAGGATTATCTGCCGTCCTCTACGGTGGAGAGGAGGAGTAGTGATGGGGTGAGAACTCAGGTCACAG
AGGCTAAGAATGGAATGAGGCCAGGAACAGAGAGCACAGAGAAGGAGAGGAATAAAGGAGCAGTGAACGT
CGGGGGACAGGACCCAGAGCCGGGGCAAGACCTAAGCCAGCCAGAACGGGAAGTGGATCCTAGCTGGGGC
CGAGGCCGAGAGCCAAGACTTGGCAAGCTACGCTTTCAGAACGATCCCCTCTCCGTGCTGAAGCAGGTCA
AGAAACTCGAGCAGGCTTTGAAGGATGGGTCGGCAGGGCTGGATCCCCAGTTACCAGGGACTTGTTACTC
CCCACACTGCCCTCCTGACAAGGCAGAGGCAGGGTCCACCCTTCCTGAGAACCTGGGAGGCGGGAGTGGC
TCAGAAGTCAGCCAGAGGGTCCACCCCTCGGACCTGGAAGGCAGGGAGCCCACCCCTGAGCTTGTGGAGG
ACAGGAAAGGTTCATGCAGAAGGCCCTGGGACCGGAGCCTTGAGAACGTGTATAGGGGCTCGGAGGGTTC
CCCCACAAAGCCCTTCATCAACCCTCTGCCAAAACCCCGGAGAACGTTCAAACATGCCGGAGAAGGGGAC
AAAGATGGGAAGCCTGGCATCGGCTTCAGGAAAGAGAAAAGAAATCTGCCTCCTCTGCCCTCTCTACCTC
CCCCGCCTCTGCCCTCCTCTCCCCCACCTTCCTCTGTGAACAGAAGACTGTGGACCGGGAGACAGAAATC
CAGTGCAGACCACAGAAAGTCCTATGAGTTTGAAGATTTACTGCAGTCTTCCTCTGAGAGCAGCAGGGTG
GACTGGTACGCGCAGACTAAGCTGGGGCTGACACGCACTTTATCGGAGGAGAACGTCTATGAAGACATTC
TAGATCCGCCAATGAAGGAGAACCCTTATGAGGACATCGAGTTACATGGTCGCTGCCTGGGAAAGAAGTG
TGTCTTGAATTTTCCTGCTTCTCCCACCTCTTCCATCCCTGACACACTCACCAAGCAGTCATTGTCCAAA
CCTGCTTTTTTCCGACAAAATTCAGAGAGGAGGAACTTCAAGCTGCTGGACACTAGGAAGCTGAGTCGGG
ATGGAACTGGGTCCCCTTCCAAAATCAGCCCTCCCTCCACTCCCAGCAGCCCTGATGACATTTTCTTTAA
CCTTGGAGACCCACAGAACGGCAGGAAGAAGAGAAAGATACCCAAGCTGGTGTTGCGAATCAACGCCATT
TATGAGGTCCGGAGAGGAAAGAAACGGGTGAAGAGGCTGTCCCAGTCAATGGAGAGCAACTCAGGAAAAG
TGACAGATGAGAACAGTGAGTCTGACAGTGACACAGAGGAGAAGCTGAAAGCTCACAGCCAGCGCCTGGT
CAACGTGAAGTCCCGGCTGAAGCAGGCGCCTCGGTACCCATCACTTGCCCGGGAACTCATCGAGTACCAG
GAGAGGCAGCTCTTCGAGTACTTTGTGGTTGTGTCTTTGCACAAGAAGCAGGCCGGGGCTGCCTACGTGC
CAGAACTCACCCAACAGTTCCCTCTGAAGTTGGAAAGGTCTTTCAAGTTCATGAGAGAAGCTGAGGACCA
ACTGAAGGCCATTCCCCAGTTCTGTTTTCCCGATGCCAAGGATTGGGTTCCTGTCCAGCAGTTCACCAGT
GAAACATTCTCATTTGTCTTAACTGGAGAAGATGGGAGCAGAAGGTTCGGTTACTGCCGAAGACTGCTGC
CTGGAGGCAAAGGGAAGCGCCTTCCTGAAGTTTACTGCATTGTGAGCCGCCTGGGATGCTTCAGCCTCTT
TTCAAGGATCTTGGATGAGGTGGAAAAAAGACGAGGCATCTCTCCTGCCCTGGTTCAGCCACTCATGAGA
AGTGTCATGGAAGCCCCTTTCCCAGCCCTGGGCAAAACCATCCTTGTCAAGAACTTCCTGCCAGGTTCAG
GAACTGAGGTGATCGAACTGTGCCGCCCGCTGGACTCCCGGCTCGAGCACGTGGACTTTGAGTCTCTCTT
CTCCTCCCTCAGCGTCCGCCACCTGGTCTGTGTGTTTGCCTCCCTGCTTCTGGAGAGGAGGGTCATCTTC
ATTGCAGACAAGCTCAGCATCCTGTCCAAGTGCTGCCACGCGATGGTGGCGCTGATCTACCCCTTCGCCT
GGCAGCACACCTACATCCCGGTGCTGCCACCCGCCATGGTCGACATCGTGTGCTCGCCGACGCCCTTCCT
CATCGGGCTGCTCTCCAGCTCGCTGCCACTGCTCAGGGAGCTGCCGCTGGAAGAGGTCCTTGTGGTTGAC
CTCGTCAACAGCCGGTTCCTCAGACAGATGGACGATGAGGACTCCATCCTGCCCCGGAAGCTTCAGGTGG
CCCTGGAACACATTCTGGAACAGAGGAACGAGCTGGCTTGTGAGCAGGACGAAGGGCCCCTAGACGGCAG
GCACGGTCCAGAGTCCAGCCCCTTGAACGAGGTGGTGTCTGAAGCCTTTGTCCGCTTCTTCGTGGAGATT
GTGGGACACTACTCTTTGTTCCTGACGTCGGGCGAGCGTGAGGAGAGAACCCTGCAGCGGGAGGCCTTCC
GCAAAGCTGTCTCCTCCAAGAGCCTCCGCCACTTCCTGGAGGTCTTCATGGAGACTCAGATGTTTCGGGG
CTTCATCCAGGAGCGGGAGCTGCGCCGGCAGGATGCCAAAGGTCTGTTTGAGGTCCGAGCCCAAGAGTAT
CTGGAAACACTCCCCAGTGGAGAGCACAGCGGTGTCAATAAGTTCCTGAAGGGACTAGGCAATAAAATGA
AATTTCTCCACAAGAAATAA

Translation (1009 aa):
MDMFSLDMIISDPAAEASRAGKKQLRGVQNPCPSARARPRHKSLNIKDKISEWEGKKEVPTPAPSRRADG
QEDYLPSSTVERRSSDGVRTQVTEAKNGMRPGTESTEKERNKGAVNVGGQDPEPGQDLSQPEREVDPSWG
RGREPRLGKLRFQNDPLSVLKQVKKLEQALKDGSAGLDPQLPGTCYSPHCPPDKAEAGSTLPENLGGGSG
SEVSQRVHPSDLEGREPTPELVEDRKGSCRRPWDRSLENVYRGSEGSPTKPFINPLPKPRRTFKHAGEGD
KDGKPGIGFRKEKRNLPPLPSLPPPPLPSSPPPSSVNRRLWTGRQKSSADHRKSYEFEDLLQSSSESSRV
DWYAQTKLGLTRTLSEENVYEDILDPPMKENPYEDIELHGRCLGKKCVLNFPASPTSSIPDTLTKQSLSK
PAFFRQNSERRNFKLLDTRKLSRDGTGSPSKISPPSTPSSPDDIFFNLGDPQNGRKKRKIPKLVLRINAI
YEVRRGKKRVKRLSQSMESNSGKVTDENSESDSDTEEKLKAHSQRLVNVKSRLKQAPRYPSLARELIEYQ
ERQLFEYFVVVSLHKKQAGAAYVPELTQQFPLKLERSFKFMREAEDQLKAIPQFCFPDAKDWVPVQQFTS
ETFSFVLTGEDGSRRFGYCRRLLPGGKGKRLPEVYCIVSRLGCFSLFSRILDEVEKRRGISPALVQPLMR
SVMEAPFPALGKTILVKNFLPGSGTEVIELCRPLDSRLEHVDFESLFSSLSVRHLVCVFASLLLERRVIF
IADKLSILSKCCHAMVALIYPFAWQHTYIPVLPPAMVDIVCSPTPFLIGLLSSSLPLLRELPLEEVLVVD
LVNSRFLRQMDDEDSILPRKLQVALEHILEQRNELACEQDEGPLDGRHGPESSPLNEVVSEAFVRFFVEI
VGHYSLFLTSGEREERTLQREAFRKAVSSKSLRHFLEVFMETQMFRGFIQERELRRQDAKGLFEVRAQEY
LETLPSGEHSGVNKFLKGLGNKMKFLHKK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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