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Report for CCDS41519.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
41519.1 Public Homo sapiens 10 TMEM273 24 110 108 CCDS HistoryNCBI Gene:170371Re-query CCDS DB by CCDS ID:41519.1Re-query CCDS DB by GeneID:170371See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 41519.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000474718.5 ENSP00000417246.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000474718.5Link to Ensembl Protein Viewer:ENSP00000417246.1Re-query CCDS DB by Nucleotide ID:ENST00000474718Re-query CCDS DB by Protein ID:ENSP00000417246
Original member Current member NCBI NM_001010863.4 NP_001010863.1 Accepted alive Link to Nucleotide Sequence:NM_001010863.4Link to Protein Sequence:NP_001010863.1Re-query CCDS DB by Nucleotide ID:NM_001010863Re-query CCDS DB by Protein ID:NP_001010863Link to BLAST:NP_001010863.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001010863.1 105 Q5T292-1 105 100% 0 0

Chromosomal Locations for CCDS 41519.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 49155885 49155909 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 49161599 49161622 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 49165766 49165796 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 49166869 49167009 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 49167909 49167962 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 49188294 49188336 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (318 nt):
ATGAACTTGGGGGTCAGCATGCTGAGGATCCTCTTCCTCCTGGATGTAGGAGGAGCTCAAGTGCTGGCAA
CAGGCAAGACCCCTGGGGCTGAAATTGATTTCAAGTACGCCCTCATCGGGACTGCTGTGGGTGTCGCCAT
ATCTGCTGGCTTCCTGGCCCTGAAGATCTGCATGATCAGGAGGCACTTATTTGACGACGACTCTTCCGAC
CTGAAAAGCACGCCTGGGGGCCTCAGTGACACCATCCCGCTAAAGAAGAGAGCCCCAAGGCGAAACCACA
ATTTCTCCAAAAGAGATGCACAGGTGATTGAGCTGTAG

Translation (105 aa):
MNLGVSMLRILFLLDVGGAQVLATGKTPGAEIDFKYALIGTAVGVAISAGFLALKICMIRRHLFDDDSSD
LKSTPGGLSDTIPLKKRAPRRNHNFSKRDAQVIEL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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