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Report for CCDS14738.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14738.2 Public Homo sapiens X RENBP 24 110 108 CCDS HistoryNCBI Gene:5973Re-query CCDS DB by CCDS ID:14738.2Re-query CCDS DB by GeneID:5973See the combined annotation on chromosome X in Sequence Viewer

Public Note for CCDS 14738.1
The coding region has been updated to extend the N-terminus to one that is more supported by available transcript and conservation data.

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 14738.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000393700.8 ENSP00000377303.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000393700.8Link to Ensembl Protein Viewer:ENSP00000377303.3Re-query CCDS DB by Nucleotide ID:ENST00000393700Re-query CCDS DB by Protein ID:ENSP00000377303
Original member Current member NCBI NM_002910.6 NP_002901.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_002910.6Link to Protein Sequence:NP_002901.2Re-query CCDS DB by Nucleotide ID:NM_002910Re-query CCDS DB by Protein ID:NP_002901Link to BLAST:NP_002901.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_002901.2 427 P51606-1 427 100% 0 0

Chromosomal Locations for CCDS 14738.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 153935286 153935404 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 153935489 153935576 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 153940102 153940233 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 153941478 153941653 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 153941950 153942031 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 153942855 153943079 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 153943546 153943718 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 153943895 153943970 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 153944080 153944155 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 153944309 153944418 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 153944584 153944610 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1284 nt):
ATGAGCAAGGGTCTCCCAGCGCGACAGGACATGGAGAAAGAGCGAGAGACTCTGCAGGCCTGGAAGGAGC
GCGTGGGGCAGGAGCTGGACCGCGTGGTGGCTTTCTGGATGGAGCACTCCCACGACCAGGAGCACGGGGG
CTTCTTCACGTGCCTTGGCCGCGAGGGGCGGGTGTATGATGACCTCAAGTATGTGTGGCTGCAGGGGAGG
CAGGTATGGATGTATTGTCGCCTGTACCGCACTTTCGAGCGCTTCCGCCATGCTCAGCTTCTGGACGCAG
CAAAAGCAGGTGGTGAGTTCTTGCTGCGGTATGCCCGGGTGGCACCTCCTGGCAAGAAGTGTGCCTTTGT
GCTGACTCGGGACGGCCGCCCGGTCAAGGTGCAGCGAACCATCTTCAGTGAGTGTTTCTACACCATGGCC
ATGAACGAGCTGTGGAGAGCCACAGGGGAAGTGCGGTACCAGACGGAAGCGGTGGAGATGATGGATCAGA
TCGTCCACTGGGTGCAGGAGGACGCGTCGGGACTGGGCCGGCCCCAGCTCCAGGGGGCCCCGGCTGCGGA
GCCCATGGCGGTGCCCATGATGCTACTGAACCTGGTGGAGCAGCTCGGGGAGGCAGATGAGGAGCTGGCG
GGCAAATACGCAGAGCTGGGGGACTGGTGCGCCCGGAGGATTCTGCAGCACGTGCAGAGGGATGGACAAG
CTGTGCTGGAGAATGTGTCAGAGGGTGGCAAGGAACTTCCTGGCTGCCTGGGGAGACAGCAGAACCCAGG
CCACACGCTGGAAGCCGGCTGGTTTCTGCTCCGTCATTGCATTCGGAAAGGCGACCCCGAACTTCGAGCC
CACGTGATTGACAAGTTCCTATTGTTGCCCTTCCACTCCGGATGGGACCCTGACCACGGAGGCCTCTTTT
ACTTCCAGGATGCTGATAACTTCTGCCCCACCCAGCTGGAGTGGGCCATGAAGCTCTGGTGGCCACACAG
TGAAGCCATGATTGCCTTCCTCATGGGTTACAGTGACAGTGGGGACCCTGTGCTGCTGCGCCTCTTCTAC
CAAGTGGCTGAGTACACCTTCCGCCAGTTTCGCGATCCCGAGTACGGGGAATGGTTTGGCTACCTGAGCC
GAGAGGGCAAGGTGGCCCTCTCCATCAAGGGAGGTCCTTTCAAAGGCTGCTTCCACGTGCCGCGGTGCCT
AGCCATGTGCGAGGAGATGCTGGGCGCCCTGCTGAGCCGCCCCGCCCCCGCCCCCTCCCCCGCCCCCACC
CCCGCCTGCCGAGGCGCGGAATAA

Translation (427 aa):
MSKGLPARQDMEKERETLQAWKERVGQELDRVVAFWMEHSHDQEHGGFFTCLGREGRVYDDLKYVWLQGR
QVWMYCRLYRTFERFRHAQLLDAAKAGGEFLLRYARVAPPGKKCAFVLTRDGRPVKVQRTIFSECFYTMA
MNELWRATGEVRYQTEAVEMMDQIVHWVQEDASGLGRPQLQGAPAAEPMAVPMMLLNLVEQLGEADEELA
GKYAELGDWCARRILQHVQRDGQAVLENVSEGGKELPGCLGRQQNPGHTLEAGWFLLRHCIRKGDPELRA
HVIDKFLLLPFHSGWDPDHGGLFYFQDADNFCPTQLEWAMKLWWPHSEAMIAFLMGYSDSGDPVLLRLFY
QVAEYTFRQFRDPEYGEWFGYLSREGKVALSIKGGPFKGCFHVPRCLAMCEEMLGALLSRPAPAPSPAPT
PACRGAE


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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