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Report for CCDS7136.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7136.1 Public Homo sapiens 10 DNAJC1 24 110 108 CCDS HistoryNCBI Gene:64215Re-query CCDS DB by CCDS ID:7136.1Re-query CCDS DB by GeneID:64215See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7136.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000376980.8 ENSP00000366179.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000376980.8Link to Ensembl Protein Viewer:ENSP00000366179.3Re-query CCDS DB by Nucleotide ID:ENST00000376980Re-query CCDS DB by Protein ID:ENSP00000366179
Original member Current member NCBI NM_022365.4 NP_071760.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_022365.4Link to Protein Sequence:NP_071760.2Re-query CCDS DB by Nucleotide ID:NM_022365Re-query CCDS DB by Protein ID:NP_071760Link to BLAST:NP_071760.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_071760.2 554 Q96KC8 554 100% 0 0

Chromosomal Locations for CCDS 7136.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 21756687 21756755 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 21759170 21759618 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 21766261 21766309 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 21805980 21806099 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 21882282 21882439 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 21904522 21904612 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 21918779 21918872 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 21919832 21919929 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 21920798 21920963 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 21928506 21928552 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 21929040 21929141 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 22003213 22003434 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1665 nt):
ATGACGGCTCCTTGCTCCCAGCCGGCGCAGCTTCCTGGACGCCGCCAGCTCGGGCTGGTGCCGTTCCCGC
CGCCGCCGCCGCGGACGCCGCTGCTGTGGCTGCTGCTGCTGCTGCTGGCCGCCGTGGCGCCGGCGCGCGG
CTGGGAGAGCGGAGACCTGGAGTTGTTTGACTTAGTGGAGGAGGTGCAGCTCAACTTCTACCAGTTCCTC
GGGGTGCAGCAGGATGCATCATCTGCAGACATCAGAAAAGCATATCGTAAGCTTTCACTAACTTTACATC
CAGACAAGAATAAAGATGAAAATGCAGAAACTCAGTTTAGACAATTGGTGGCCATTTATGAAGTTTTAAA
GGATGATGAACGAAGGCAGAGGTATGATGATATTCTGATCAATGGACTTCCAGATTGGCGACAGCCTGTA
TTCTACTACAGGCGGGTGAGAAAAATGAGCAATGCTGAGCTGGCATTACTCTTGTTCATTATTCTCACAG
TGGGTCATTATGCTGTGGTTTGGTCAATCTACCTGGAAAAACAACTGGATGAACTACTAAGTAGAAAAAA
GAGAGAAAAGAAAAAAAAGACTGGCAGCAAGAGTGTGGATGTATCAAAACTCGGTGCTTCAGAAAAAAAT
GAAAGATTGCTGATGAAACCACAGTGGCATGATTTGCTTCCATGCAAACTGGGGATTTGGTTTTGCCTTA
CACTAAAAGCATTACCTCACCTCATCCAGGATGCTGGGCAGTTTTATGCTAAATATAAAGAAACAAGATT
GAAGGAAAAGGAAGATGCACTGACTAGAACTGAACTTGAAACACTTCAAAAACAGAAGAAAGTTAAAAAA
CCAAAACCTGAATTTCCTGTATACACACCTTTAGAAACTACATATATTCAGTCTTATGATCATGGAACTT
CCATAGAAGAAATTGAGGAACAAATGGATGATTGGTTGGAAAACAGGAACCGAACACAGAAAAAACAGGC
ACCTGAATGGACAGAAGAGGACCTCAGCCAACTGACAAGAAGTATGGTTAAGTTCCCAGGAGGGACTCCA
GGTCGATGGGAAAAGATTGCCCACGAATTGGGTCGATCTGTGACAGATGTGACAACCAAAGCCAAGCAAC
TGAAGGATTCAGTGACCTGCTCCCCAGGAATGGTTAGACTCTCCGAACTCAAATCGACAGTTCAGAATTC
CAGGCCCATCAAAACGGCCACCACCTTGCCCGATGACATGATCACCCAGCGAGAGGACGCAGAGGGGGTG
GCAGCGGAGGAGGAGCAGGAGGGAGACTCCGGTGAGCAGGAGACCGGGGCCACTGATGCCCGGCCTCGGA
GGCGGAAGCCAGCCAGGCTGCTGGAGGCTACAGCGAAGCCGGAGCCAGAGGAGAAGTCCAGAGCCAAGCG
GCAGAAGGACTTTGACATAGCAGAACAAAACGAGTCCAGCGACGAGGAGAGCCTGAGAAAAGAGAGAGCT
CGGTCTGCAGAGGAGCCGTGGACTCAAAATCAACAGAAACTTCTGGAACTGGCGTTGCAGCAGTACCCAA
GGGGATCCTCTGACCGCTGGGACAAAATAGCCAGATGTGTCCCGTCCAAGAGCAAGGAAGACTGTATCGC
TAGGTACAAGTTGCTGGTTGAACTGGTCCAAAAGAAAAAACAAGCTAAAAGCTGA

Translation (554 aa):
MTAPCSQPAQLPGRRQLGLVPFPPPPPRTPLLWLLLLLLAAVAPARGWESGDLELFDLVEEVQLNFYQFL
GVQQDASSADIRKAYRKLSLTLHPDKNKDENAETQFRQLVAIYEVLKDDERRQRYDDILINGLPDWRQPV
FYYRRVRKMSNAELALLLFIILTVGHYAVVWSIYLEKQLDELLSRKKREKKKKTGSKSVDVSKLGASEKN
ERLLMKPQWHDLLPCKLGIWFCLTLKALPHLIQDAGQFYAKYKETRLKEKEDALTRTELETLQKQKKVKK
PKPEFPVYTPLETTYIQSYDHGTSIEEIEEQMDDWLENRNRTQKKQAPEWTEEDLSQLTRSMVKFPGGTP
GRWEKIAHELGRSVTDVTTKAKQLKDSVTCSPGMVRLSELKSTVQNSRPIKTATTLPDDMITQREDAEGV
AAEEEQEGDSGEQETGATDARPRRRKPARLLEATAKPEPEEKSRAKRQKDFDIAEQNESSDEESLRKERA
RSAEEPWTQNQQKLLELALQQYPRGSSDRWDKIARCVPSKSKEDCIARYKLLVELVQKKKQAKS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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