Algorithm-type
Defined in file cdd.asn
C++ class: CAlgorithm_type
Algorithm-type ::= SEQUENCE {
scoring-Scheme INTEGER { unassigned (0),
percent-id (1),
kimura-corrected (2),
aligned-score (3),
aligned-score-ext (4),
aligned-score-filled (5),
blast-footprint (6),
blast-full (7),
hybrid-aligned-score (8),
other (255) },
clustering-Method INTEGER { unassigned (0),
single-linkage (1),
neighbor-joining (2),
fast-minimum-evolution (3),
other (255) },
score-Matrix INTEGER { unassigned (0),
blosum45 (1),
blosum62 (2),
blosum80 (3),
pam30 (4),
pam70 (5),
pam250 (6),
other (255) } OPTIONAL,
gapOpen INTEGER OPTIONAL,
gapExtend INTEGER OPTIONAL,
gapScaleFactor INTEGER OPTIONAL,
nTerminalExt INTEGER OPTIONAL,
cTerminalExt INTEGER OPTIONAL,
tree-scope INTEGER { allDescendants (0),
immediateChildrenOnly(1),
selfOnly (2),
other (255) } OPTIONAL,
coloring-scope INTEGER { allDescendants (0),
immediateChildrenOnly (1),
other (255) } OPTIONAL
}