Packed-seg

Defined in file seqalign.asn
C++ class: CPacked_seg


Packed-seg ::= SEQUENCE {         -- for (multiway) global or partial alignments
    dim INTEGER DEFAULT 2 ,       -- dimensionality
    numseg INTEGER ,              -- number of segments here
    ids SEQUENCE OF Seq-id ,      -- sequences in order
    starts SEQUENCE OF INTEGER ,  -- start OFFSETS in ids order for whole alignment
    present OCTET STRING ,        -- Boolean if each sequence present or absent in
                                  --   each segment
    lens SEQUENCE OF INTEGER ,    -- length of each segment
    strands SEQUENCE OF Na-strand OPTIONAL ,
    scores SEQUENCE OF Score OPTIONAL }  -- score for each segment