Parameters

Defined in file blastxml.asn
C++ class: CParameters


Parameters ::= SEQUENCE {
	matrix VisibleString OPTIONAL ,	-- Matrix used (-M)
	expect REAL ,			-- Expectation threshold (-e)
	include REAL OPTIONAL ,		-- Inclusion threshold (-h)
	sc-match INTEGER OPTIONAL ,	-- match score for NT (-r)
	sc-mismatch INTEGER OPTIONAL ,	-- mismatch score for NT (-q)
	gap-open INTEGER ,		-- Gap opening cost (-G)
	gap-extend INTEGER ,		-- Gap extension cost (-E)
	filter VisibleString OPTIONAL,  -- Filtering options (-F)
	pattern VisibleString OPTIONAL,	-- PHI-BLAST pattern
        entrez-query VisibleString OPTIONAL -- Limit of request to Entrez query
}