Sparse-align

Defined in file seqalign.asn
C++ class: CSparse_align


Sparse-align ::= SEQUENCE {
    first-id Seq-id,
    second-id Seq-id,

    numseg INTEGER,                      --number of segments
    first-starts SEQUENCE OF INTEGER ,   --starts on the first sequence [numseg]
    second-starts SEQUENCE OF INTEGER ,  --starts on the second sequence [numseg]
    lens SEQUENCE OF INTEGER ,           --lengths of segments [numseg]
    second-strands SEQUENCE OF Na-strand OPTIONAL ,

    -- per-segment scores
    seg-scores SET OF Score OPTIONAL
}