Spliced-exon
Defined in file seqalign.asn
C++ class: CSpliced_exon
Spliced-exon ::= SEQUENCE {
-- product-end >= product-start
product-start Product-pos ,
product-end Product-pos ,
-- genomic-end >= genomic-start
genomic-start INTEGER ,
genomic-end INTEGER ,
-- product is either protein or transcript (cDNA)
product-id Seq-id OPTIONAL ,
genomic-id Seq-id OPTIONAL ,
-- should be 'plus' or 'minus'
product-strand Na-strand OPTIONAL ,
-- genomic-strand represents the strand of translation
genomic-strand Na-strand OPTIONAL ,
-- basic seqments always are in biologic order
parts SEQUENCE OF Spliced-exon-chunk OPTIONAL ,
-- scores for this exon
scores Score-set OPTIONAL ,
-- splice sites
acceptor-before-exon Splice-site OPTIONAL,
donor-after-exon Splice-site OPTIONAL,
-- flag: is this exon complete or partial?
partial BOOLEAN OPTIONAL,
--extra info
ext SEQUENCE OF User-object OPTIONAL
}