#include <ncbi_pch.hpp>
#include "AgpFastaComparator.hpp"
#include <algorithm>
#include <sstream>
#include <corelib/ncbiapp.hpp>
#include <corelib/ncbiargs.hpp>
#include <corelib/ncbienv.hpp>
#include <corelib/ncbiexec.hpp>
#include <util/checksum.hpp>
#include <objmgr/object_manager.hpp>
#include <objmgr/bioseq_handle.hpp>
#include <objmgr/scope.hpp>
#include <objects/general/Object_id.hpp>
#include <objects/seq/Delta_ext.hpp>
#include <objects/seq/Delta_seq.hpp>
#include <objects/seq/Seq_ext.hpp>
#include <objects/seq/Seq_literal.hpp>
#include <objects/submit/Seq_submit.hpp>
#include <objmgr/seq_entry_handle.hpp>
#include <objmgr/bioseq_ci.hpp>
#include <objmgr/seq_vector.hpp>
#include <objmgr/util/sequence.hpp>
#include <objtools/data_loaders/genbank/gbloader.hpp>
#include <objtools/data_loaders/lds2/lds2_dataloader.hpp>
#include <objtools/lds2/lds2.hpp>
#include <objtools/readers/agp_seq_entry.hpp>
#include <objtools/readers/agp_util.hpp>
#include <objtools/readers/fasta.hpp>
#include <objtools/readers/reader_exception.hpp>

Include dependency graph for AgpFastaComparator.cpp:

Go to the SVN repository for this file.

Macros
#define	COMP_LOG(msg)

Functions
	USING_SCOPE (objects)

Variables
	USING_NCBI_SCOPE

Macro Definition Documentation

◆ COMP_LOG

#define COMP_LOG ( msg )

Value:

    do {                                        \
        if( x_IsLogFileOpen() ) {    \
            *m_pLoadLogFile << msg << endl;     \
        }                                       \
    } while(false)

Definition at line 74 of file AgpFastaComparator.cpp.

Function Documentation

◆ USING_SCOPE()

USING_SCOPE ( objects )

Variable Documentation

◆ USING_NCBI_SCOPE

USING_NCBI_SCOPE

Definition at line 82 of file AgpFastaComparator.cpp.

Macros