NCBI C++ ToolKit
Modification_info_.cpp
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1 /* $Id$
2  * ===========================================================================
3  *
4  * PUBLIC DOMAIN NOTICE
5  * National Center for Biotechnology Information
6  *
7  * This software/database is a "United States Government Work" under the
8  * terms of the United States Copyright Act. It was written as part of
9  * the author's official duties as a United States Government employee and
10  * thus cannot be copyrighted. This software/database is freely available
11  * to the public for use. The National Library of Medicine and the U.S.
12  * Government have not placed any restriction on its use or reproduction.
13  *
14  * Although all reasonable efforts have been taken to ensure the accuracy
15  * and reliability of the software and data, the NLM and the U.S.
16  * Government do not and cannot warrant the performance or results that
17  * may be obtained by using this software or data. The NLM and the U.S.
18  * Government disclaim all warranties, express or implied, including
19  * warranties of performance, merchantability or fitness for any particular
20  * purpose.
21  *
22  * Please cite the author in any work or product based on this material.
23  *
24  * ===========================================================================
25  *
26  * File Description:
27  * This code was generated by application DATATOOL
28  * using the following specifications:
29  * 'pepXML.xsd'.
30  *
31  * ATTENTION:
32  * Don't edit or commit this file into CVS as this file will
33  * be overridden (by DATATOOL) without warning!
34  * ===========================================================================
35  */
36 
37 // standard includes
38 #include <ncbi_pch.hpp>
39 #include <serial/serialimpl.hpp>
40 
41 // generated includes
45 
46 BEGIN_objects_SCOPE // namespace ncbi::objects::
47 
48 
49 // generated classes
50 
52 {
53  m_Modified_peptide.erase();
54  m_set_State[0] &= ~0x30;
55 }
56 
58 {
59  ResetMod_nterm_mass();
60  ResetMod_cterm_mass();
61  ResetModified_peptide();
62 }
63 
65 {
66  SET_INTERNAL_NAME("modification_info", "Attlist");
67  SET_CLASS_MODULE("pepXML");
68  ADD_NAMED_STD_MEMBER("mod_nterm_mass", m_Mod_nterm_mass)->SetSetFlag(MEMBER_PTR(m_set_State[0]))->SetOptional()->SetNsQualified(false);
69  ADD_NAMED_STD_MEMBER("mod_cterm_mass", m_Mod_cterm_mass)->SetSetFlag(MEMBER_PTR(m_set_State[0]))->SetOptional()->SetNsQualified(false);
70  ADD_NAMED_STD_MEMBER("modified_peptide", m_Modified_peptide)->SetSetFlag(MEMBER_PTR(m_set_State[0]))->SetOptional()->SetNsQualified(false);
71  info->SetRandomOrder(true);
72  info->CodeVersion(22400);
73  info->DataSpec(ncbi::EDataSpec::eXSD);
74 }
76 
77 // constructor
79  : m_Mod_nterm_mass(0), m_Mod_cterm_mass(0)
80 {
81  memset(m_set_State,0,sizeof(m_set_State));
82 }
83 
84 // destructor
86 {
87 }
88 
89 
91 {
92  if ( !m_Attlist ) {
93  m_Attlist.Reset(new TAttlist());
94  return;
95  }
96  (*m_Attlist).Reset();
97 }
98 
100 {
101  m_Attlist.Reset(&value);
102 }
103 
105 {
106  m_Mod_aminoacid_mass.clear();
107  m_set_State[0] &= ~0xc;
108 }
109 
111 {
112  ResetAttlist();
114 }
115 
117 {
118  SET_CLASS_MODULE("pepXML");
119  SET_NAMESPACE("http://regis-web.systemsbiology.net/pepXML")->SetNsQualified(true);
120  ADD_NAMED_REF_MEMBER("Attlist", m_Attlist, C_Attlist)->SetAttlist();
121  ADD_NAMED_MEMBER("mod_aminoacid_mass", m_Mod_aminoacid_mass, STL_list, (STL_CRef, (CLASS, (CMod_aminoacid_mass))))->SetSetFlag(MEMBER_PTR(m_set_State[0]))->SetOptional();
122  info->RandomOrder();
123  info->CodeVersion(22400);
124  info->DataSpec(ncbi::EDataSpec::eXSD);
125 }
127 
128 // constructor
130 {
131  memset(m_set_State,0,sizeof(m_set_State));
132  if ( !IsAllocatedInPool() ) {
133  ResetAttlist();
134  }
135 }
136 
137 // destructor
139 {
140 }
141 
142 
143 
144 END_objects_SCOPE // namespace ncbi::objects::
145 
147 
User-defined methods of the data storage class.
User-defined methods of the data storage class.
BEGIN_NAMED_BASE_CLASS_INFO("modification_info", CModification_info)
BEGIN_NAMED_CLASS_INFO("", CModification_info_Base::C_Attlist)
CMod_aminoacid_mass –.
CModification_info –.
#define MEMBER_PTR(MemberName)
Definition: serialimpl.hpp:284
#define ADD_NAMED_MEMBER(MemberAlias, MemberName, TypeMacro, TypeMacroArgs)
Definition: serialimpl.hpp:342
#define ADD_NAMED_REF_MEMBER(MemberAlias, MemberName, ClassName)
Definition: serialimpl.hpp:357
#define END_CLASS_INFO
Definition: serialimpl.hpp:456
#define ADD_NAMED_STD_MEMBER(MemberAlias, MemberName)
Definition: serialimpl.hpp:345
#define SET_CLASS_MODULE(ModuleName)
Definition: serialimpl.hpp:444
#define SET_NAMESPACE(name)
Definition: serialimpl.hpp:450
#define SET_INTERNAL_NAME(OwnerName, MemberName)
Definition: serialimpl.hpp:447
bool IsAllocatedInPool(void) const THROWS_NONE
Check if object is allocated in memory pool (not system heap)
Definition: ncbiobj.hpp:461
#define END_NCBI_SCOPE
End previously defined NCBI scope.
Definition: ncbistl.hpp:103
#define BEGIN_NCBI_SCOPE
Define ncbi namespace.
Definition: ncbistl.hpp:100
void ResetModified_peptide(void)
Reset Modified_peptide data member.
void Reset(void)
Reset the whole object.
TAttlist & SetAttlist(void)
Assign a value to Attlist data member.
list< CRef< CMod_aminoacid_mass > > m_Mod_aminoacid_mass
virtual ~CModification_info_Base(void)
virtual void Reset(void)
Reset the whole object.
void ResetAttlist(void)
Reset Attlist data member.
void ResetMod_aminoacid_mass(void)
Reset Mod_aminoacid_mass data member.
static MDB_envinfo info
Definition: mdb_load.c:37
const GenericPointer< typename T::ValueType > T2 value
Definition: pointer.h:1227
Modified on Wed Apr 17 13:09:23 2024 by modify_doxy.py rev. 669887