NCBI C++ ToolKit
PrimarySequence_.cpp
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1 /* $Id$
2  * ===========================================================================
3  *
4  * PUBLIC DOMAIN NOTICE
5  * National Center for Biotechnology Information
6  *
7  * This software/database is a "United States Government Work" under the
8  * terms of the United States Copyright Act. It was written as part of
9  * the author's official duties as a United States Government employee and
10  * thus cannot be copyrighted. This software/database is freely available
11  * to the public for use. The National Library of Medicine and the U.S.
12  * Government have not placed any restriction on its use or reproduction.
13  *
14  * Although all reasonable efforts have been taken to ensure the accuracy
15  * and reliability of the software and data, the NLM and the U.S.
16  * Government do not and cannot warrant the performance or results that
17  * may be obtained by using this software or data. The NLM and the U.S.
18  * Government disclaim all warranties, express or implied, including
19  * warranties of performance, merchantability or fitness for any particular
20  * purpose.
21  *
22  * Please cite the author in any work or product based on this material.
23  *
24  * ===========================================================================
25  *
26  * File Description:
27  * This code was generated by application DATATOOL
28  * using the following specifications:
29  * 'docsum.asn'.
30  *
31  * ATTENTION:
32  * Don't edit or commit this file into CVS as this file will
33  * be overridden (by DATATOOL) without warning!
34  * ===========================================================================
35  */
36 
37 // standard includes
38 #include <ncbi_pch.hpp>
39 #include <serial/serialimpl.hpp>
40 
41 // generated includes
45 
46 BEGIN_objects_SCOPE // namespace ncbi::objects::
47 
48 
49 // generated classes
50 
52 {
53  SET_ENUM_INTERNAL_NAME("PrimarySequence.attlist", "source");
54  SET_ENUM_MODULE("Docsum-3-4");
55  ADD_ENUM_VALUE("submitter", eAttlist_source_submitter);
56  ADD_ENUM_VALUE("blastmb", eAttlist_source_blastmb);
57  ADD_ENUM_VALUE("xm", eAttlist_source_xm);
58  ADD_ENUM_VALUE("remap", eAttlist_source_remap);
59  ADD_ENUM_VALUE("hgvs", eAttlist_source_hgvs);
60 }
62 
64 {
65  m_Accession.erase();
66  m_set_State[0] &= ~0xc0;
67 }
68 
70 {
71  ResetDbSnpBuild();
72  ResetGi();
73  ResetSource();
74  ResetAccession();
75 }
76 
78 {
79  SET_INTERNAL_NAME("PrimarySequence", "attlist");
80  SET_CLASS_MODULE("Docsum-3-4");
81  ADD_NAMED_STD_MEMBER("dbSnpBuild", m_DbSnpBuild)->SetSetFlag(MEMBER_PTR(m_set_State[0]));
82  ADD_NAMED_STD_MEMBER("gi", m_Gi)->SetSetFlag(MEMBER_PTR(m_set_State[0]));
83  ADD_NAMED_ENUM_MEMBER("source", m_Source, EAttlist_source)->SetSetFlag(MEMBER_PTR(m_set_State[0]))->SetOptional();
84  ADD_NAMED_STD_MEMBER("accession", m_Accession)->SetSetFlag(MEMBER_PTR(m_set_State[0]))->SetOptional();
85  info->SetRandomOrder(true);
86  info->CodeVersion(22400);
87  info->DataSpec(ncbi::EDataSpec::eASN);
88 }
90 
91 // constructor
93  : m_DbSnpBuild(0), m_Gi(0), m_Source((EAttlist_source)(0))
94 {
95  memset(m_set_State,0,sizeof(m_set_State));
96 }
97 
98 // destructor
100 {
101 }
102 
103 
105 {
106  if ( !m_Attlist ) {
107  m_Attlist.Reset(new TAttlist());
108  return;
109  }
110  (*m_Attlist).Reset();
111 }
112 
114 {
115  m_Attlist.Reset(&value);
116 }
117 
119 {
120  m_MapLoc.clear();
121  m_set_State[0] &= ~0xc;
122 }
123 
125 {
126  ResetAttlist();
127  ResetMapLoc();
128 }
129 
131 {
132  SET_CLASS_MODULE("Docsum-3-4");
133  ADD_NAMED_REF_MEMBER("attlist", m_Attlist, C_Attlist);
134  ADD_NAMED_MEMBER("mapLoc", m_MapLoc, STL_list, (STL_CRef, (CLASS, (CMapLoc))))->SetSetFlag(MEMBER_PTR(m_set_State[0]));
135  info->RandomOrder();
136  info->CodeVersion(22400);
137  info->DataSpec(ncbi::EDataSpec::eASN);
138 }
140 
141 // constructor
143 {
144  memset(m_set_State,0,sizeof(m_set_State));
145  if ( !IsAllocatedInPool() ) {
146  ResetAttlist();
147  }
148 }
149 
150 // destructor
152 {
153 }
154 
155 
156 
157 END_objects_SCOPE // namespace ncbi::objects::
158 
160 
User-defined methods of the data storage class.
User-defined methods of the data storage class.
BEGIN_NAMED_ENUM_IN_INFO("", CPrimarySequence_Base::C_Attlist::, EAttlist_source, false)
BEGIN_NAMED_CLASS_INFO("", CPrimarySequence_Base::C_Attlist)
BEGIN_NAMED_BASE_CLASS_INFO("PrimarySequence", CPrimarySequence)
END_ENUM_INFO
Definition: aln_errors.cpp:58
CMapLoc –.
Definition: MapLoc.hpp:66
CPrimarySequence –.
#define MEMBER_PTR(MemberName)
Definition: serialimpl.hpp:284
#define SET_ENUM_INTERNAL_NAME(OwnerName, MemberName)
Definition: serialimpl.hpp:559
#define ADD_NAMED_MEMBER(MemberAlias, MemberName, TypeMacro, TypeMacroArgs)
Definition: serialimpl.hpp:342
#define ADD_NAMED_REF_MEMBER(MemberAlias, MemberName, ClassName)
Definition: serialimpl.hpp:357
#define SET_ENUM_MODULE(ModuleName)
Definition: serialimpl.hpp:553
#define END_CLASS_INFO
Definition: serialimpl.hpp:456
#define ADD_NAMED_STD_MEMBER(MemberAlias, MemberName)
Definition: serialimpl.hpp:345
#define SET_CLASS_MODULE(ModuleName)
Definition: serialimpl.hpp:444
#define ADD_NAMED_ENUM_MEMBER(MemberAlias, MemberName, EnumName)
Definition: serialimpl.hpp:351
#define ADD_ENUM_VALUE(EnumValueName, EnumValueValue)
Definition: serialimpl.hpp:562
#define SET_INTERNAL_NAME(OwnerName, MemberName)
Definition: serialimpl.hpp:447
bool IsAllocatedInPool(void) const THROWS_NONE
Check if object is allocated in memory pool (not system heap)
Definition: ncbiobj.hpp:461
#define END_NCBI_SCOPE
End previously defined NCBI scope.
Definition: ncbistl.hpp:103
#define BEGIN_NCBI_SCOPE
Define ncbi namespace.
Definition: ncbistl.hpp:100
virtual ~CPrimarySequence_Base(void)
void ResetMapLoc(void)
Reset MapLoc data member.
void Reset(void)
Reset the whole object.
void ResetAccession(void)
Reset Accession data member.
list< CRef< CMapLoc > > m_MapLoc
TAttlist & SetAttlist(void)
Assign a value to Attlist data member.
virtual void Reset(void)
Reset the whole object.
CRef< TAttlist > m_Attlist
void ResetAttlist(void)
Reset Attlist data member.
static MDB_envinfo info
Definition: mdb_load.c:37
const GenericPointer< typename T::ValueType > T2 value
Definition: pointer.h:1227
Modified on Mon Jul 15 05:32:49 2024 by modify_doxy.py rev. 669887