Seq_inst.hpp

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/* $Id: Seq_inst.hpp 75340 2016-11-08 13:43:55Z bollin $
 * ===========================================================================
 *
 *                            PUBLIC DOMAIN NOTICE
 *               National Center for Biotechnology Information
 *
 *  This software/database is a "United States Government Work" under the
 *  terms of the United States Copyright Act.  It was written as part of
 *  the author's official duties as a United States Government employee and
 *  thus cannot be copyrighted.  This software/database is freely available
 *  to the public for use. The National Library of Medicine and the U.S.
 *  Government have not placed any restriction on its use or reproduction.
 *
 *  Although all reasonable efforts have been taken to ensure the accuracy
 *  and reliability of the software and data, the NLM and the U.S.
 *  Government do not and cannot warrant the performance or results that
 *  may be obtained by using this software or data. The NLM and the U.S.
 *  Government disclaim all warranties, express or implied, including
 *  warranties of performance, merchantability or fitness for any particular
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 *  Please cite the author in any work or product based on this material.
 *
 * ===========================================================================
 *
 * Author:  .......
 *
 * File Description:
 *   .......
 *
 * Remark:
 *   This code was originally generated by application DATATOOL
 *   using specifications from the data definition file
 *   'seq.asn'.
 */
 
#ifndef OBJECTS_SEQ_SEQ_INST_HPP
#define OBJECTS_SEQ_SEQ_INST_HPP
 
 
// generated includes
#include <objects/seq/Seq_inst_.hpp>
 
// generated classes
 
BEGIN_NCBI_SCOPE
 
BEGIN_objects_SCOPE // namespace ncbi::objects::
 
class NCBI_SEQ_EXPORT CSeq_inst : public CSeq_inst_Base
{
    typedef CSeq_inst_Base Tparent;
public:
    // constructor
    CSeq_inst(void);
    // destructor
    ~CSeq_inst(void);
 
    // check molecule type for nucleotide or protein
    static bool IsNa(EMol mol);
    static bool IsAa(EMol mol);
 
    bool IsNa(void) const;
    bool IsAa(void) const;
 
    // translate EMol to string
    static string GetMoleculeClass(EMol mol);
 
    bool ConvertDeltaToRaw();
 
private:
    // Prohibit copy constructor and assignment operator
    CSeq_inst(const CSeq_inst& value);
    CSeq_inst& operator=(const CSeq_inst& value);
 
};
 
 
 
/////////////////// CSeq_inst inline methods
 
// constructor
inline
CSeq_inst::CSeq_inst(void)
{
}
 
 
inline
bool CSeq_inst::IsNa(EMol mol)
{
    return (mol == eMol_dna  ||
            mol == eMol_rna  ||
            mol == eMol_na);
}
 
 
inline
bool CSeq_inst::IsAa(EMol mol)
{
    return (mol == eMol_aa);
}
 
 
inline
bool CSeq_inst::IsNa(void) const
{
    return IsNa(GetMol());
}
 
 
inline
bool CSeq_inst::IsAa(void) const
{
    return IsAa(GetMol());
}
 
 
/////////////////// end of CSeq_inst inline methods
 
 
END_objects_SCOPE // namespace ncbi::objects::
 
END_NCBI_SCOPE
 
#endif // OBJECTS_SEQ_SEQ_INST_HPP
/* Original file checksum: lines: 93, chars: 2363, CRC32: 8de74472 */