Spectrum_query_.cpp

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/* $Id$
 * ===========================================================================
 *
 *                            PUBLIC DOMAIN NOTICE
 *               National Center for Biotechnology Information
 *
 *  This software/database is a "United States Government Work" under the
 *  terms of the United States Copyright Act.  It was written as part of
 *  the author's official duties as a United States Government employee and
 *  thus cannot be copyrighted.  This software/database is freely available
 *  to the public for use. The National Library of Medicine and the U.S.
 *  Government have not placed any restriction on its use or reproduction.
 *
 *  Although all reasonable efforts have been taken to ensure the accuracy
 *  and reliability of the software and data, the NLM and the U.S.
 *  Government do not and cannot warrant the performance or results that
 *  may be obtained by using this software or data. The NLM and the U.S.
 *  Government disclaim all warranties, express or implied, including
 *  warranties of performance, merchantability or fitness for any particular
 *  purpose.
 *
 *  Please cite the author in any work or product based on this material.
 *
 * ===========================================================================
 *
 * File Description:
 *   This code was generated by application DATATOOL
 *   using the following specifications:
 *   'pepXML.xsd'.
 *
 * ATTENTION:
 *   Don't edit or commit this file into CVS as this file will
 *   be overridden (by DATATOOL) without warning!
 * ===========================================================================
 */
 
// standard includes
#include <ncbi_pch.hpp>
#include <serial/serialimpl.hpp>
 
// generated includes
#include <algo/ms/formats/pepxml/Spectrum_query.hpp>
#include <algo/ms/formats/pepxml/Search_result.hpp>
BEGIN_NCBI_SCOPE
 
BEGIN_objects_SCOPE // namespace ncbi::objects::
 
 
// generated classes
 
void CSpectrum_query_Base::C_Attlist::ResetSpectrum(void)
{
    m_Spectrum.erase();
    m_set_State[0] &= ~0x3;
}
 
void CSpectrum_query_Base::C_Attlist::ResetSearch_specification(void)
{
    m_Search_specification.erase();
    m_set_State[0] &= ~0x3000;
}
 
void CSpectrum_query_Base::C_Attlist::Reset(void)
{
    ResetSpectrum();
    ResetStart_scan();
    ResetEnd_scan();
    ResetRetention_time_sec();
    ResetPrecursor_neutral_mass();
    ResetAssumed_charge();
    ResetSearch_specification();
    ResetIndex();
}
 
BEGIN_NAMED_CLASS_INFO("", CSpectrum_query_Base::C_Attlist)
{
    SET_INTERNAL_NAME("spectrum_query", "Attlist");
    SET_CLASS_MODULE("pepXML");
    ADD_NAMED_STD_MEMBER("spectrum", m_Spectrum)->SetSetFlag(MEMBER_PTR(m_set_State[0]))->SetNsQualified(false);
    ADD_NAMED_STD_MEMBER("start_scan", m_Start_scan)->SetSetFlag(MEMBER_PTR(m_set_State[0]))->SetNsQualified(false);
    ADD_NAMED_STD_MEMBER("end_scan", m_End_scan)->SetSetFlag(MEMBER_PTR(m_set_State[0]))->SetNsQualified(false);
    ADD_NAMED_STD_MEMBER("retention_time_sec", m_Retention_time_sec)->SetSetFlag(MEMBER_PTR(m_set_State[0]))->SetOptional()->SetNsQualified(false);
    ADD_NAMED_STD_MEMBER("precursor_neutral_mass", m_Precursor_neutral_mass)->SetSetFlag(MEMBER_PTR(m_set_State[0]))->SetNsQualified(false);
    ADD_NAMED_STD_MEMBER("assumed_charge", m_Assumed_charge)->SetSetFlag(MEMBER_PTR(m_set_State[0]))->SetNsQualified(false);
    ADD_NAMED_STD_MEMBER("search_specification", m_Search_specification)->SetSetFlag(MEMBER_PTR(m_set_State[0]))->SetOptional()->SetNsQualified(false);
    ADD_NAMED_STD_MEMBER("index", m_Index)->SetSetFlag(MEMBER_PTR(m_set_State[0]))->SetNsQualified(false);
    info->SetRandomOrder(true);
    info->CodeVersion(22400);
    info->DataSpec(ncbi::EDataSpec::eXSD);
}
END_CLASS_INFO
 
// constructor
CSpectrum_query_Base::C_Attlist::C_Attlist(void)
    : m_Start_scan(0), m_End_scan(0), m_Retention_time_sec(0), m_Precursor_neutral_mass(0), m_Assumed_charge(0), m_Index(0)
{
    memset(m_set_State,0,sizeof(m_set_State));
}
 
// destructor
CSpectrum_query_Base::C_Attlist::~C_Attlist(void)
{
}
 
 
void CSpectrum_query_Base::ResetAttlist(void)
{
    if ( !m_Attlist ) {
        m_Attlist.Reset(new TAttlist());
        return;
    }
    (*m_Attlist).Reset();
}
 
void CSpectrum_query_Base::SetAttlist(CSpectrum_query_Base::TAttlist& value)
{
    m_Attlist.Reset(&value);
}
 
void CSpectrum_query_Base::ResetSearch_result(void)
{
    m_Search_result.clear();
    m_set_State[0] &= ~0xc;
}
 
void CSpectrum_query_Base::Reset(void)
{
    ResetAttlist();
    ResetSearch_result();
}
 
BEGIN_NAMED_BASE_CLASS_INFO("spectrum_query", CSpectrum_query)
{
    SET_CLASS_MODULE("pepXML");
    SET_NAMESPACE("http://regis-web.systemsbiology.net/pepXML")->SetNsQualified(true);
    ADD_NAMED_REF_MEMBER("Attlist", m_Attlist, C_Attlist)->SetAttlist();
    ADD_NAMED_MEMBER("search_result", m_Search_result, STL_list, (STL_CRef, (CLASS, (CSearch_result))))->SetSetFlag(MEMBER_PTR(m_set_State[0]))->SetOptional();
    info->RandomOrder();
    info->CodeVersion(22400);
    info->DataSpec(ncbi::EDataSpec::eXSD);
}
END_CLASS_INFO
 
// constructor
CSpectrum_query_Base::CSpectrum_query_Base(void)
{
    memset(m_set_State,0,sizeof(m_set_State));
    if ( !IsAllocatedInPool() ) {
        ResetAttlist();
    }
}
 
// destructor
CSpectrum_query_Base::~CSpectrum_query_Base(void)
{
}
 
 
 
END_objects_SCOPE // namespace ncbi::objects::
 
END_NCBI_SCOPE