NCBI C++ ToolKit
Spectrum_query_.cpp
Go to the documentation of this file.

Go to the SVN repository for this file.

1 /* $Id$
2  * ===========================================================================
3  *
4  * PUBLIC DOMAIN NOTICE
5  * National Center for Biotechnology Information
6  *
7  * This software/database is a "United States Government Work" under the
8  * terms of the United States Copyright Act. It was written as part of
9  * the author's official duties as a United States Government employee and
10  * thus cannot be copyrighted. This software/database is freely available
11  * to the public for use. The National Library of Medicine and the U.S.
12  * Government have not placed any restriction on its use or reproduction.
13  *
14  * Although all reasonable efforts have been taken to ensure the accuracy
15  * and reliability of the software and data, the NLM and the U.S.
16  * Government do not and cannot warrant the performance or results that
17  * may be obtained by using this software or data. The NLM and the U.S.
18  * Government disclaim all warranties, express or implied, including
19  * warranties of performance, merchantability or fitness for any particular
20  * purpose.
21  *
22  * Please cite the author in any work or product based on this material.
23  *
24  * ===========================================================================
25  *
26  * File Description:
27  * This code was generated by application DATATOOL
28  * using the following specifications:
29  * 'pepXML.xsd'.
30  *
31  * ATTENTION:
32  * Don't edit or commit this file into CVS as this file will
33  * be overridden (by DATATOOL) without warning!
34  * ===========================================================================
35  */
36 
37 // standard includes
38 #include <ncbi_pch.hpp>
39 #include <serial/serialimpl.hpp>
40 
41 // generated includes
45 
46 BEGIN_objects_SCOPE // namespace ncbi::objects::
47 
48 
49 // generated classes
50 
52 {
53  m_Spectrum.erase();
54  m_set_State[0] &= ~0x3;
55 }
56 
58 {
59  m_Search_specification.erase();
60  m_set_State[0] &= ~0x3000;
61 }
62 
64 {
65  ResetSpectrum();
66  ResetStart_scan();
67  ResetEnd_scan();
68  ResetRetention_time_sec();
69  ResetPrecursor_neutral_mass();
70  ResetAssumed_charge();
71  ResetSearch_specification();
72  ResetIndex();
73 }
74 
76 {
77  SET_INTERNAL_NAME("spectrum_query", "Attlist");
78  SET_CLASS_MODULE("pepXML");
79  ADD_NAMED_STD_MEMBER("spectrum", m_Spectrum)->SetSetFlag(MEMBER_PTR(m_set_State[0]))->SetNsQualified(false);
80  ADD_NAMED_STD_MEMBER("start_scan", m_Start_scan)->SetSetFlag(MEMBER_PTR(m_set_State[0]))->SetNsQualified(false);
81  ADD_NAMED_STD_MEMBER("end_scan", m_End_scan)->SetSetFlag(MEMBER_PTR(m_set_State[0]))->SetNsQualified(false);
82  ADD_NAMED_STD_MEMBER("retention_time_sec", m_Retention_time_sec)->SetSetFlag(MEMBER_PTR(m_set_State[0]))->SetOptional()->SetNsQualified(false);
83  ADD_NAMED_STD_MEMBER("precursor_neutral_mass", m_Precursor_neutral_mass)->SetSetFlag(MEMBER_PTR(m_set_State[0]))->SetNsQualified(false);
84  ADD_NAMED_STD_MEMBER("assumed_charge", m_Assumed_charge)->SetSetFlag(MEMBER_PTR(m_set_State[0]))->SetNsQualified(false);
85  ADD_NAMED_STD_MEMBER("search_specification", m_Search_specification)->SetSetFlag(MEMBER_PTR(m_set_State[0]))->SetOptional()->SetNsQualified(false);
86  ADD_NAMED_STD_MEMBER("index", m_Index)->SetSetFlag(MEMBER_PTR(m_set_State[0]))->SetNsQualified(false);
87  info->SetRandomOrder(true);
88  info->CodeVersion(22400);
89  info->DataSpec(ncbi::EDataSpec::eXSD);
90 }
92 
93 // constructor
95  : m_Start_scan(0), m_End_scan(0), m_Retention_time_sec(0), m_Precursor_neutral_mass(0), m_Assumed_charge(0), m_Index(0)
96 {
97  memset(m_set_State,0,sizeof(m_set_State));
98 }
99 
100 // destructor
102 {
103 }
104 
105 
107 {
108  if ( !m_Attlist ) {
109  m_Attlist.Reset(new TAttlist());
110  return;
111  }
112  (*m_Attlist).Reset();
113 }
114 
116 {
117  m_Attlist.Reset(&value);
118 }
119 
121 {
122  m_Search_result.clear();
123  m_set_State[0] &= ~0xc;
124 }
125 
127 {
128  ResetAttlist();
130 }
131 
133 {
134  SET_CLASS_MODULE("pepXML");
135  SET_NAMESPACE("http://regis-web.systemsbiology.net/pepXML")->SetNsQualified(true);
136  ADD_NAMED_REF_MEMBER("Attlist", m_Attlist, C_Attlist)->SetAttlist();
137  ADD_NAMED_MEMBER("search_result", m_Search_result, STL_list, (STL_CRef, (CLASS, (CSearch_result))))->SetSetFlag(MEMBER_PTR(m_set_State[0]))->SetOptional();
138  info->RandomOrder();
139  info->CodeVersion(22400);
140  info->DataSpec(ncbi::EDataSpec::eXSD);
141 }
143 
144 // constructor
146 {
147  memset(m_set_State,0,sizeof(m_set_State));
148  if ( !IsAllocatedInPool() ) {
149  ResetAttlist();
150  }
151 }
152 
153 // destructor
155 {
156 }
157 
158 
159 
160 END_objects_SCOPE // namespace ncbi::objects::
161 
163 
User-defined methods of the data storage class.
User-defined methods of the data storage class.
BEGIN_NAMED_BASE_CLASS_INFO("spectrum_query", CSpectrum_query)
BEGIN_NAMED_CLASS_INFO("", CSpectrum_query_Base::C_Attlist)
CSearch_result –.
CSpectrum_query –.
#define MEMBER_PTR(MemberName)
Definition: serialimpl.hpp:284
#define ADD_NAMED_MEMBER(MemberAlias, MemberName, TypeMacro, TypeMacroArgs)
Definition: serialimpl.hpp:342
#define ADD_NAMED_REF_MEMBER(MemberAlias, MemberName, ClassName)
Definition: serialimpl.hpp:357
#define END_CLASS_INFO
Definition: serialimpl.hpp:456
#define ADD_NAMED_STD_MEMBER(MemberAlias, MemberName)
Definition: serialimpl.hpp:345
#define SET_CLASS_MODULE(ModuleName)
Definition: serialimpl.hpp:444
#define SET_NAMESPACE(name)
Definition: serialimpl.hpp:450
#define SET_INTERNAL_NAME(OwnerName, MemberName)
Definition: serialimpl.hpp:447
bool IsAllocatedInPool(void) const THROWS_NONE
Check if object is allocated in memory pool (not system heap)
Definition: ncbiobj.hpp:461
#define END_NCBI_SCOPE
End previously defined NCBI scope.
Definition: ncbistl.hpp:103
#define BEGIN_NCBI_SCOPE
Define ncbi namespace.
Definition: ncbistl.hpp:100
void ResetSearch_result(void)
Reset Search_result data member.
void ResetSpectrum(void)
Reset Spectrum data member.
virtual ~CSpectrum_query_Base(void)
CRef< TAttlist > m_Attlist
void ResetSearch_specification(void)
Reset Search_specification data member.
virtual void Reset(void)
Reset the whole object.
list< CRef< CSearch_result > > m_Search_result
TAttlist & SetAttlist(void)
Assign a value to Attlist data member.
void ResetAttlist(void)
Reset Attlist data member.
void Reset(void)
Reset the whole object.
static MDB_envinfo info
Definition: mdb_load.c:37
const GenericPointer< typename T::ValueType > T2 value
Definition: pointer.h:1227
Modified on Wed May 29 18:42:59 2024 by modify_doxy.py rev. 669887