Subsequence_.hpp

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/* $Id$
 * ===========================================================================
 *
 *                            PUBLIC DOMAIN NOTICE
 *               National Center for Biotechnology Information
 *
 *  This software/database is a "United States Government Work" under the
 *  terms of the United States Copyright Act.  It was written as part of
 *  the author's official duties as a United States Government employee and
 *  thus cannot be copyrighted.  This software/database is freely available
 *  to the public for use. The National Library of Medicine and the U.S.
 *  Government have not placed any restriction on its use or reproduction.
 *
 *  Although all reasonable efforts have been taken to ensure the accuracy
 *  and reliability of the software and data, the NLM and the U.S.
 *  Government do not and cannot warrant the performance or results that
 *  may be obtained by using this software or data. The NLM and the U.S.
 *  Government disclaim all warranties, express or implied, including
 *  warranties of performance, merchantability or fitness for any particular
 *  purpose.
 *
 *  Please cite the author in any work or product based on this material.
 *
 * ===========================================================================
 *
 */
 
/// @file Subsequence_.hpp
/// Data storage class.
///
/// This file was generated by application DATATOOL
/// using the following specifications:
/// <a href="/IEB/ToolBox/CPP_DOC/lxr/source/src/objects/varrep/varrep.asn">varrep.asn</a>
/// and additional tune-up parameters:
/// <a href="/IEB/ToolBox/CPP_DOC/lxr/source/src/objects/varrep/varrep.def">varrep.def</a>
///
/// ATTENTION:
///   Don't edit or commit this file into CVS as this file will
///   be overridden (by DATATOOL) without warning!
 
#ifndef OBJECTS_VARREP_SUBSEQUENCE_BASE_HPP
#define OBJECTS_VARREP_SUBSEQUENCE_BASE_HPP
 
// standard includes
#include <serial/serialbase.hpp>
 
// generated includes
#include <string>
#include <objects/varrep/VariantSeqType.hpp>
 
BEGIN_NCBI_SCOPE
 
#ifndef BEGIN_objects_SCOPE
#  define BEGIN_objects_SCOPE BEGIN_SCOPE(objects)
#  define END_objects_SCOPE END_SCOPE(objects)
#endif
BEGIN_objects_SCOPE // namespace ncbi::objects::
 
 
// forward declarations
class CSeqInterval;
 
 
// generated classes
 
 
/** @addtogroup dataspec_NCBI_VariationIRep
 *
 * @{
 */
 
/////////////////////////////////////////////////////////////////////////////
///
/// CSubsequence_Base --
///
 
class CSubsequence_Base : public CSerialObject
{
    typedef CSerialObject Tparent;
public:
    // constructor
    CSubsequence_Base(void);
    // destructor
    virtual ~CSubsequence_Base(void);
 
    // type info
    DECLARE_INTERNAL_TYPE_INFO();
 
    // types
    typedef string TIdentifier;
    typedef int TType;
    typedef CSeqInterval TInt;
 
    // member index
    enum class E_memberIndex {
        e__allMandatory = 0,
        e_identifier,
        e_type,
        e_int
    };
    typedef Tparent::CMemberIndex<E_memberIndex, 4> TmemberIndex;
 
    // getters
    // setters
 
    /// For example, an accession id
    /// Check if a value has been assigned to Identifier data member.
    ///
    /// Data member Identifier is mandatory;
    /// its type is defined as 'typedef string TIdentifier'
    /// @return
    ///   - true, if a value has been assigned.
    ///   - false, otherwise.
    bool IsSetIdentifier(void) const;
 
    /// Check if it is safe to call GetIdentifier method.
    ///
    /// @return
    ///   - true, if the data member is getatable.
    ///   - false, otherwise.
    bool CanGetIdentifier(void) const;
 
    /// Reset Identifier data member.
    void ResetIdentifier(void);
 
    /// Get the Identifier member data.
    ///
    /// @return
    ///   Reference to the member data.
    const TIdentifier& GetIdentifier(void) const;
 
    /// Assign a value to Identifier data member.
    ///
    /// @param value
    ///   Value to assign
    void SetIdentifier(const TIdentifier& value);
    void SetIdentifier(TIdentifier&& value);
 
    /// Assign a value to Identifier data member.
    ///
    /// @return
    ///   Reference to the data value.
    TIdentifier& SetIdentifier(void);
 
    /// Check if a value has been assigned to Type data member.
    ///
    /// Data member Type is mandatory;
    /// its type is defined as 'typedef int TType'
    /// @return
    ///   - true, if a value has been assigned.
    ///   - false, otherwise.
    bool IsSetType(void) const;
 
    /// Check if it is safe to call GetType method.
    ///
    /// @return
    ///   - true, if the data member is getatable.
    ///   - false, otherwise.
    bool CanGetType(void) const;
 
    /// Reset Type data member.
    void ResetType(void);
 
    /// Get the Type member data.
    ///
    /// @return
    ///   Copy of the member data.
    TType GetType(void) const;
 
    /// Assign a value to Type data member.
    ///
    /// @param value
    ///   Value to assign
    void SetType(TType value);
 
    /// Assign a value to Type data member.
    ///
    /// @return
    ///   Reference to the data value.
    TType& SetType(void);
 
    /// Check if a value has been assigned to Int data member.
    ///
    /// Data member Int is mandatory;
    /// its type is defined as 'typedef CSeqInterval TInt'
    /// @return
    ///   - true, if a value has been assigned.
    ///   - false, otherwise.
    bool IsSetInt(void) const;
 
    /// Check if it is safe to call GetInt method.
    ///
    /// @return
    ///   - true, if the data member is getatable.
    ///   - false, otherwise.
    bool CanGetInt(void) const;
 
    /// Reset Int data member.
    void ResetInt(void);
 
    /// Get the Int member data.
    ///
    /// @return
    ///   Reference to the member data.
    const TInt& GetInt(void) const;
 
    /// Assign a value to Int data member.
    ///
    /// @param value
    ///   Reference to value.
    void SetInt(TInt& value);
 
    /// Assign a value to Int data member.
    ///
    /// @return
    ///   Reference to the data value.
    TInt& SetInt(void);
 
    /// Reset the whole object
    virtual void Reset(void);
 
 
private:
    // Prohibit copy constructor and assignment operator
    CSubsequence_Base(const CSubsequence_Base&);
    CSubsequence_Base& operator=(const CSubsequence_Base&);
 
    // data
    Uint4 m_set_State[1];
    string m_Identifier;
    int m_Type;
    CRef< TInt > m_Int;
};
 
/* @} */
 
 
 
 
 
///////////////////////////////////////////////////////////
///////////////////// inline methods //////////////////////
///////////////////////////////////////////////////////////
inline
bool CSubsequence_Base::IsSetIdentifier(void) const
{
    return ((m_set_State[0] & 0x3) != 0);
}
 
inline
bool CSubsequence_Base::CanGetIdentifier(void) const
{
    return IsSetIdentifier();
}
 
inline
const CSubsequence_Base::TIdentifier& CSubsequence_Base::GetIdentifier(void) const
{
    if (!CanGetIdentifier()) {
        ThrowUnassigned(0);
    }
    return m_Identifier;
}
 
inline
void CSubsequence_Base::SetIdentifier(const CSubsequence_Base::TIdentifier& value)
{
    m_Identifier = value;
    m_set_State[0] |= 0x3;
}
 
inline
void CSubsequence_Base::SetIdentifier(CSubsequence_Base::TIdentifier&& value)
{
    m_Identifier = std::forward<CSubsequence_Base::TIdentifier>(value);
    m_set_State[0] |= 0x3;
}
 
inline
CSubsequence_Base::TIdentifier& CSubsequence_Base::SetIdentifier(void)
{
#ifdef _DEBUG
    if (!IsSetIdentifier()) {
        m_Identifier = UnassignedString();
    }
#endif
    m_set_State[0] |= 0x1;
    return m_Identifier;
}
 
inline
bool CSubsequence_Base::IsSetType(void) const
{
    return ((m_set_State[0] & 0xc) != 0);
}
 
inline
bool CSubsequence_Base::CanGetType(void) const
{
    return IsSetType();
}
 
inline
void CSubsequence_Base::ResetType(void)
{
    m_Type = (int)(0);
    m_set_State[0] &= ~0xc;
}
 
inline
CSubsequence_Base::TType CSubsequence_Base::GetType(void) const
{
    if (!CanGetType()) {
        ThrowUnassigned(1);
    }
    return m_Type;
}
 
inline
void CSubsequence_Base::SetType(CSubsequence_Base::TType value)
{
    m_Type = value;
    m_set_State[0] |= 0xc;
}
 
inline
CSubsequence_Base::TType& CSubsequence_Base::SetType(void)
{
#ifdef _DEBUG
    if (!IsSetType()) {
        memset(&m_Type,UnassignedByte(),sizeof(m_Type));
    }
#endif
    m_set_State[0] |= 0x4;
    return m_Type;
}
 
inline
bool CSubsequence_Base::IsSetInt(void) const
{
    return m_Int.NotEmpty();
}
 
inline
bool CSubsequence_Base::CanGetInt(void) const
{
    return true;
}
 
inline
const CSubsequence_Base::TInt& CSubsequence_Base::GetInt(void) const
{
    if ( !m_Int ) {
        const_cast<CSubsequence_Base*>(this)->ResetInt();
    }
    return (*m_Int);
}
 
inline
CSubsequence_Base::TInt& CSubsequence_Base::SetInt(void)
{
    if ( !m_Int ) {
        ResetInt();
    }
    return (*m_Int);
}
 
///////////////////////////////////////////////////////////
////////////////// end of inline methods //////////////////
///////////////////////////////////////////////////////////
 
 
 
 
 
END_objects_SCOPE // namespace ncbi::objects::
 
END_NCBI_SCOPE
 
 
#endif // OBJECTS_VARREP_SUBSEQUENCE_BASE_HPP