NCBI C++ ToolKit
Classes | Macros | Enumerations
ValidErrItem.hpp File Reference

User-defined methods of the data storage class. More...

#include <corelib/ncbistd.hpp>
#include <corelib/ncbidiag.hpp>
#include <objects/seqset/Seq_entry.hpp>
#include <objects/valerr/ValidErrItem_.hpp>
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Classes

class  CValidErrItem
 

Macros

#define ERR_CODE_BEGIN(x)   x##BEGIN
 
#define ERR_CODE_END(x)   x##END
 

Enumerations

enum  EErrType {
  eErr_ALL = 0 , eErr_UNKNOWN , SEQ_INSTBEGIN , eErr_SEQ_INST_ExtNotAllowed ,
  eErr_SEQ_INST_ExtBadOrMissing , eErr_SEQ_INST_SeqDataNotFound , eErr_SEQ_INST_SeqDataNotAllowed , eErr_SEQ_INST_ReprInvalid ,
  eErr_SEQ_INST_CircularProtein , eErr_SEQ_INST_BadProteinMoltype , eErr_SEQ_INST_MolNotSet , eErr_SEQ_INST_MolinfoOther ,
  eErr_SEQ_INST_FuzzyLen , eErr_SEQ_INST_InvalidLen , eErr_SEQ_INST_InvalidAlphabet , eErr_SEQ_INST_SeqDataLenWrong ,
  eErr_SEQ_INST_SeqPortFail , eErr_SEQ_INST_InvalidResidue , eErr_SEQ_INST_StopInProtein , eErr_SEQ_INST_PartialInconsistent ,
  eErr_SEQ_INST_ShortSeq , eErr_SEQ_INST_NoIdOnBioseq , eErr_SEQ_INST_BadDeltaSeq , eErr_SEQ_INST_LongHtgsSequence ,
  eErr_SEQ_INST_LongLiteralSequence , eErr_SEQ_INST_ConflictingIdsOnBioseq , eErr_SEQ_INST_MolNuclAcid , eErr_SEQ_INST_ConflictingBiomolTech ,
  eErr_SEQ_INST_SeqIdNameHasSpace , eErr_SEQ_INST_IdOnMultipleBioseqs , eErr_SEQ_INST_DuplicateSegmentReferences , eErr_SEQ_INST_TrailingX ,
  eErr_SEQ_INST_BadSeqIdFormat , eErr_SEQ_INST_PartsOutOfOrder , eErr_SEQ_INST_BadSecondaryAccn , eErr_SEQ_INST_ZeroGiNumber ,
  eErr_SEQ_INST_RnaDnaConflict , eErr_SEQ_INST_HistoryGiCollision , eErr_SEQ_INST_GiWithoutAccession , eErr_SEQ_INST_MultipleAccessions ,
  eErr_SEQ_INST_HistAssemblyMissing , eErr_SEQ_INST_TerminalNs , eErr_SEQ_INST_UnexpectedIdentifierChange , eErr_SEQ_INST_InternalNsInSeqLit ,
  eErr_SEQ_INST_SeqLitGapLength0 , eErr_SEQ_INST_TpaAssemblyProblem , eErr_SEQ_INST_SeqLocLength , eErr_SEQ_INST_MissingGaps ,
  eErr_SEQ_INST_CompleteTitleProblem , eErr_SEQ_INST_CompleteCircleProblem , eErr_SEQ_INST_BadHTGSeq , eErr_SEQ_INST_GapInProtein ,
  eErr_SEQ_INST_BadProteinStart , eErr_SEQ_INST_TerminalGap , eErr_SEQ_INST_OverlappingDeltaRange , eErr_SEQ_INST_LeadingX ,
  eErr_SEQ_INST_InternalNsInSeqRaw , eErr_SEQ_INST_InternalNsAdjacentToGap , eErr_SEQ_INST_CaseDifferenceInSeqID , eErr_SEQ_INST_DeltaComponentIsGi0 ,
  eErr_SEQ_INST_FarFetchFailure , eErr_SEQ_INST_InternalGapsInSeqRaw , eErr_SEQ_INST_SelfReferentialSequence , eErr_SEQ_INST_WholeComponent ,
  eErr_SEQ_INST_TSAHistAssemblyMissing , eErr_SEQ_INST_ProteinsHaveGeneralID , eErr_SEQ_INST_HighNContent , eErr_SEQ_INST_SeqLitDataLength0 ,
  eErr_SEQ_INST_HighNContentStretch , eErr_SEQ_INST_HighNContentPercent , eErr_SEQ_INST_UnknownLengthGapNot100 , eErr_SEQ_INST_SeqGapProblem ,
  eErr_SEQ_INST_WGSMasterLacksStrucComm , eErr_SEQ_INST_TSAMasterLacksStrucComm , eErr_SEQ_INST_AllNs , eErr_SEQ_INST_FarLocationExcludesFeatures ,
  eErr_SEQ_INST_ProteinShouldNotHaveGaps , eErr_SEQ_INST_MitoMetazoanTooLong , eErr_SEQ_INST_ESTshouldBemRNA , eErr_SEQ_INST_HTGS_STS_GSS_WGSshouldBeGenomic ,
  eErr_SEQ_INST_HTGS_STS_GSS_WGSshouldNotBeRNA , eErr_SEQ_INST_mRNAshouldBeSingleStranded , eErr_SEQ_INST_TSAshouldBNotBeDNA , eErr_SEQ_INST_GenomeSeqGapProblem ,
  eErr_SEQ_INST_SeqGapBadLinkage , eErr_SEQ_INST_TSAseqGapProblem , eErr_SEQ_INST_WGSseqGapProblem , eErr_SEQ_INST_CompleteGenomeHasGaps ,
  eErr_SEQ_INST_HighNcontent5Prime , eErr_SEQ_INST_HighNcontent3Prime , eErr_SEQ_INST_HighNpercent5Prime , eErr_SEQ_INST_HighNpercent3Prime ,
  eErr_SEQ_INST_CircBactGenomeProblem , eErr_SEQ_INST_ContigsTooShort , eErr_SEQ_INST_InstantiatedGapMismatch , eErr_SEQ_INST_BadSeqIdCharacter ,
  eErr_SEQ_INST_BadSeqIdLength , SEQ_INSTEND , SEQ_DESCRBEGIN = 1000 , eErr_SEQ_DESCR_BioSourceMissing ,
  eErr_SEQ_DESCR_InvalidForType , eErr_SEQ_DESCR_FileOpenCollision , eErr_SEQ_DESCR_Unknown , eErr_SEQ_DESCR_NoPubFound ,
  eErr_SEQ_DESCR_NoOrgFound , eErr_SEQ_DESCR_MultipleBioSources , eErr_SEQ_DESCR_NoMolInfoFound , eErr_SEQ_DESCR_BadCountryCode ,
  eErr_SEQ_DESCR_NoTaxonID , eErr_SEQ_DESCR_InconsistentBioSources , eErr_SEQ_DESCR_MissingLineage , eErr_SEQ_DESCR_SerialInComment ,
  eErr_SEQ_DESCR_BioSourceNeedsFocus , eErr_SEQ_DESCR_BadOrganelleLocation , eErr_SEQ_DESCR_MultipleChromosomes , eErr_SEQ_DESCR_BadSubSource ,
  eErr_SEQ_DESCR_BadOrgMod , eErr_SEQ_DESCR_InconsistentProteinTitle , eErr_SEQ_DESCR_Inconsistent , eErr_SEQ_DESCR_ObsoleteSourceLocation ,
  eErr_SEQ_DESCR_ObsoleteSourceQual , eErr_SEQ_DESCR_StructuredSourceNote , eErr_SEQ_DESCR_UnnecessaryBioSourceFocus , eErr_SEQ_DESCR_RefGeneTrackingWithoutStatus ,
  eErr_SEQ_DESCR_UnwantedCompleteFlag , eErr_SEQ_DESCR_CollidingPublications , eErr_SEQ_DESCR_TransgenicProblem , eErr_SEQ_DESCR_TaxonomyLookupProblem ,
  eErr_SEQ_DESCR_MultipleTitles , eErr_SEQ_DESCR_RefGeneTrackingOnNonRefSeq , eErr_SEQ_DESCR_BioSourceInconsistency , eErr_SEQ_DESCR_FastaBracketTitle ,
  eErr_SEQ_DESCR_MissingText , eErr_SEQ_DESCR_BadCollectionDate , eErr_SEQ_DESCR_BadPCRPrimerSequence , eErr_SEQ_DESCR_BadPunctuation ,
  eErr_SEQ_DESCR_BadPCRPrimerName , eErr_SEQ_DESCR_BioSourceOnProtein , eErr_SEQ_DESCR_BioSourceDbTagConflict , eErr_SEQ_DESCR_DuplicatePCRPrimerSequence ,
  eErr_SEQ_DESCR_MultipleNames , eErr_SEQ_DESCR_MultipleComments , eErr_SEQ_DESCR_LatLonFormat , eErr_SEQ_DESCR_LatLonRange ,
  eErr_SEQ_DESCR_LatLonValue , eErr_SEQ_DESCR_LatLonCountry , eErr_SEQ_DESCR_LatLonState , eErr_SEQ_DESCR_BadSpecificHost ,
  eErr_SEQ_DESCR_RefGeneTrackingIllegalStatus , eErr_SEQ_DESCR_ReplacedCountryCode , eErr_SEQ_DESCR_BadInstitutionCode , eErr_SEQ_DESCR_BadCollectionCode ,
  eErr_SEQ_DESCR_IncorrectlyFormattedVoucherID , eErr_SEQ_DESCR_UnstructuredVoucher , eErr_SEQ_DESCR_ChromosomeLocation , eErr_SEQ_DESCR_MultipleSourceQualifiers ,
  eErr_SEQ_DESCR_UnbalancedParentheses , eErr_SEQ_DESCR_IdenticalInstitutionCode , eErr_SEQ_DESCR_BadCountryCapitalization , eErr_SEQ_DESCR_WrongVoucherType ,
  eErr_SEQ_DESCR_TitleHasPMID , eErr_SEQ_DESCR_BadKeyword , eErr_SEQ_DESCR_NoOrganismInTitle , eErr_SEQ_DESCR_MissingChromosome ,
  eErr_SEQ_DESCR_LatLonAdjacent , eErr_SEQ_DESCR_BadStrucCommInvalidFieldName , eErr_SEQ_DESCR_BadStrucCommInvalidFieldValue , eErr_SEQ_DESCR_BadStrucCommMissingField ,
  eErr_SEQ_DESCR_BadStrucCommFieldOutOfOrder , eErr_SEQ_DESCR_BadStrucCommMultipleFields , eErr_SEQ_DESCR_BioSourceNeedsChromosome , eErr_SEQ_DESCR_MolInfoConflictsWithBioSource ,
  eErr_SEQ_DESCR_FakeStructuredComment , eErr_SEQ_DESCR_StructuredCommentPrefixOrSuffixMissing , eErr_SEQ_DESCR_LatLonWater , eErr_SEQ_DESCR_LatLonOffshore ,
  eErr_SEQ_DESCR_MissingPersonalCollectionName , eErr_SEQ_DESCR_LatLonPrecision , eErr_SEQ_DESCR_DBLinkProblem , eErr_SEQ_DESCR_FinishedStatusForWGS ,
  eErr_SEQ_DESCR_BadTentativeName , eErr_SEQ_DESCR_OrganismNotFound , eErr_SEQ_DESCR_TaxonomyIsSpeciesProblem , eErr_SEQ_DESCR_TaxonomyConsultRequired ,
  eErr_SEQ_DESCR_TaxonomyNucleomorphProblem , eErr_SEQ_DESCR_InconsistentMolTypeBiomol , eErr_SEQ_DESCR_BadInstitutionCountry , eErr_SEQ_DESCR_AmbiguousSpecificHost ,
  eErr_SEQ_DESCR_BadAltitude , eErr_SEQ_DESCR_RefGeneTrackingOnNucProtSet , eErr_SEQ_DESCR_InconsistentDates , eErr_SEQ_DESCR_MultipleTaxonIDs ,
  eErr_SEQ_DESCR_ScaffoldLacksBioProject , eErr_SEQ_DESCR_CompleteGenomeLacksBioProject , eErr_SEQ_DESCR_TaxonomyPlastidsProblem , eErr_SEQ_DESCR_OrganismIsUndefinedSpecies ,
  eErr_SEQ_DESCR_SuspectedContaminatedCellLine , eErr_SEQ_DESCR_WrongOrganismFor16SrRNA , eErr_SEQ_DESCR_InconsistentWGSFlags , eErr_SEQ_DESCR_TitleNotAppropriateForSet ,
  eErr_SEQ_DESCR_StrainContainsTaxInfo , eErr_SEQ_DESCR_InconsistentBioSources_ConLocation , eErr_SEQ_DESCR_InconsistentRefSeqMoltype , eErr_SEQ_DESCR_InconsistentMolInfo ,
  eErr_SEQ_DESCR_InconsistentMolInfoTechnique , eErr_SEQ_DESCR_InconsistentTaxName , eErr_SEQ_DESCR_InconsistentMolType , eErr_SEQ_DESCR_InconsistentGenBankblocks ,
  eErr_SEQ_DESCR_InconsistentTaxNameSet , eErr_SEQ_DESCR_InconsistentTPA , eErr_SEQ_DESCR_BacteriaMissingSourceQualifier , eErr_SEQ_DESCR_BadBioSourceFrequencyValue ,
  eErr_SEQ_DESCR_BadPlasmidChromosomeLinkageName , eErr_SEQ_DESCR_BadPlastidName , eErr_SEQ_DESCR_EnvironSampleMissingQualifier , eErr_SEQ_DESCR_InconsistentVirusMoltype ,
  eErr_SEQ_DESCR_InvalidMatingType , eErr_SEQ_DESCR_InvalidSexQualifier , eErr_SEQ_DESCR_InvalidTissueType , eErr_SEQ_DESCR_MissingEnvironmentalSample ,
  eErr_SEQ_DESCR_MissingMetagenomicQualifier , eErr_SEQ_DESCR_MissingPlasmidLocation , eErr_SEQ_DESCR_MissingPlasmidName , eErr_SEQ_DESCR_OrgModValueInvalid ,
  eErr_SEQ_DESCR_StrainWithEnvironSample , eErr_SEQ_DESCR_UnculturedNeedsEnvSample , eErr_SEQ_DESCR_BadTextInSourceQualifier , eErr_SEQ_DESCR_OrgModMissingValue ,
  eErr_SEQ_DESCR_BadAssemblyName , eErr_SEQ_DESCR_BadKeywordForStrucComm , eErr_SEQ_DESCR_BadKeywordNoTechnique , eErr_SEQ_DESCR_BadKeywordUnverified ,
  eErr_SEQ_DESCR_BadStrucCommInvalidPrefix , eErr_SEQ_DESCR_BadStrucCommInvalidSuffix , eErr_SEQ_DESCR_BINDoesNotMatch , eErr_SEQ_DESCR_CollidingPubMedID ,
  eErr_SEQ_DESCR_CommentMissingText , eErr_SEQ_DESCR_DBLinkBadAssembly , eErr_SEQ_DESCR_DBLinkBadBioProject , eErr_SEQ_DESCR_DBLinkBadBioSample ,
  eErr_SEQ_DESCR_DBLinkBadCapitalization , eErr_SEQ_DESCR_DBLinkBadFormat , eErr_SEQ_DESCR_DBLinkBadSRAaccession , eErr_SEQ_DESCR_DBLinkMissingUserObject ,
  eErr_SEQ_DESCR_DBLinkOnSet , eErr_SEQ_DESCR_InvalidForTypeGIBB , eErr_SEQ_DESCR_InvalidMolInfo , eErr_SEQ_DESCR_MoltypeOther ,
  eErr_SEQ_DESCR_MoltypeOtherGenetic , eErr_SEQ_DESCR_MoltypeUnknown , eErr_SEQ_DESCR_MultipleDBLinkObjects , eErr_SEQ_DESCR_MultipleStrucComms ,
  eErr_SEQ_DESCR_NoKeywordHasTechnique , eErr_SEQ_DESCR_NoSourceDescriptor , eErr_SEQ_DESCR_NucleotideTechniqueOnProtein , eErr_SEQ_DESCR_ProteinTechniqueOnNucleotide ,
  eErr_SEQ_DESCR_RegionMissingText , eErr_SEQ_DESCR_StrucCommMissingPrefixOrSuffix , eErr_SEQ_DESCR_StrucCommMissingUserObject , eErr_SEQ_DESCR_SyntheticConstructNeedsArtificial ,
  eErr_SEQ_DESCR_SyntheticConstructWrongMolType , eErr_SEQ_DESCR_TaxonomyAmbiguousName , eErr_SEQ_DESCR_TaxonomyServiceProblem , eErr_SEQ_DESCR_TitleMissingText ,
  eErr_SEQ_DESCR_TPAassemblyWithoutTPAKeyword , eErr_SEQ_DESCR_UserObjectNoData , eErr_SEQ_DESCR_UserObjectNoType , eErr_SEQ_DESCR_WGSmasterLacksBioProject ,
  eErr_SEQ_DESCR_WGSmasterLacksBioSample , eErr_SEQ_DESCR_WGSMasterLacksBothBioSampleBioProject , eErr_SEQ_DESCR_WrongBiomolForTSA , eErr_SEQ_DESCR_AmbiguousName ,
  eErr_SEQ_DESCR_ModifierTypeConflict , eErr_SEQ_DESCR_AmbiguousModForward , eErr_SEQ_DESCR_AmbiguousTypeMaterial , eErr_SEQ_DESCR_EmptyOrgInput ,
  eErr_SEQ_DESCR_HostIdenticalToOrganism , eErr_SEQ_DESCR_MultipleStrains , eErr_SEQ_DESCR_BadVariety , eErr_SEQ_DESCR_BadTypeMaterial ,
  eErr_SEQ_DESCR_TaxonomyNoCommonAncestor , eErr_SEQ_DESCR_TaxonomyNoValidTaxids , eErr_SEQ_DESCR_TaxonomyEmptyInput , eErr_SEQ_DESCR_ChromosomeWithoutLocation ,
  eErr_SEQ_DESCR_TaxonomyBlankSample , eErr_SEQ_DESCR_NonViralSegment , eErr_SEQ_DESCR_BadGeoLocNameCode , eErr_SEQ_DESCR_LatLonGeoLocName ,
  eErr_SEQ_DESCR_ReplacedGeoLocNameCode , eErr_SEQ_DESCR_BadGeoLocNameCapitalization , eErr_SEQ_DESCR_BadInstitutionGeoLocName , SEQ_DESCREND ,
  GENERICBEGIN = 2000 , eErr_GENERIC_NonAsciiAsn , eErr_GENERIC_Spell , eErr_GENERIC_AuthorListHasEtAl ,
  eErr_GENERIC_MissingPubInfo , eErr_GENERIC_UnnecessaryPubEquiv , eErr_GENERIC_BadPageNumbering , eErr_GENERIC_MedlineEntryPub ,
  eErr_GENERIC_BadDate , eErr_GENERIC_StructuredCitGenCit , eErr_GENERIC_CollidingSerialNumbers , eErr_GENERIC_EmbeddedScript ,
  eErr_GENERIC_PublicationInconsistency , eErr_GENERIC_SgmlPresentInText , eErr_GENERIC_UnexpectedPubStatusComment , eErr_GENERIC_PastReleaseDate ,
  eErr_GENERIC_MissingISOJTA , eErr_GENERIC_MissingVolume , eErr_GENERIC_MissingVolumeEpub , eErr_GENERIC_MissingPages ,
  eErr_GENERIC_MissingPagesEpub , eErr_GENERIC_BarcodeTooShort , eErr_GENERIC_BarcodeMissingPrimers , eErr_GENERIC_BarcodeMissingCountry ,
  eErr_GENERIC_BarcodeMissingVoucher , eErr_GENERIC_BarcodeTooManyNs , eErr_GENERIC_BarcodeBadCollectionDate , eErr_GENERIC_BarcodeMissingOrderAssignment ,
  eErr_GENERIC_BarcodeLowTrace , eErr_GENERIC_BarcodeFrameShift , eErr_GENERIC_BarcodeStructuredVoucher , eErr_GENERIC_BarcodeTestFails ,
  eErr_GENERIC_BarcodeTestPasses , eErr_GENERIC_InvalidAsn , eErr_GENERIC_DeltaSeqError , eErr_GENERIC_DuplicateIDs ,
  eErr_GENERIC_MissingPubRequirement , eErr_GENERIC_BadSubmissionAuthorName , eErr_GENERIC_BarcodeMissingGeoLocName , GENERICEND ,
  SEQ_PKGBEGIN = 3000 , eErr_SEQ_PKG_NoCdRegionPtr , eErr_SEQ_PKG_NucProtProblem , eErr_SEQ_PKG_SegSetProblem ,
  eErr_SEQ_PKG_EmptySet , eErr_SEQ_PKG_NucProtNotSegSet , eErr_SEQ_PKG_SegSetNotParts , eErr_SEQ_PKG_SegSetMixedBioseqs ,
  eErr_SEQ_PKG_PartsSetMixedBioseqs , eErr_SEQ_PKG_PartsSetHasSets , eErr_SEQ_PKG_FeaturePackagingProblem , eErr_SEQ_PKG_GenomicProductPackagingProblem ,
  eErr_SEQ_PKG_InconsistentMolInfoBiomols , eErr_SEQ_PKG_ArchaicFeatureLocation , eErr_SEQ_PKG_ArchaicFeatureProduct , eErr_SEQ_PKG_GraphPackagingProblem ,
  eErr_SEQ_PKG_InternalGenBankSet , eErr_SEQ_PKG_ConSetProblem , eErr_SEQ_PKG_NoBioseqFound , eErr_SEQ_PKG_INSDRefSeqPackaging ,
  eErr_SEQ_PKG_GPSnonGPSPackaging , eErr_SEQ_PKG_RefSeqPopSet , eErr_SEQ_PKG_BioseqSetClassNotSet , eErr_SEQ_PKG_OrphanedProtein ,
  eErr_SEQ_PKG_MissingSetTitle , eErr_SEQ_PKG_NucProtSetHasTitle , eErr_SEQ_PKG_ComponentMissingTitle , eErr_SEQ_PKG_SingleItemSet ,
  eErr_SEQ_PKG_MisplacedMolInfo , eErr_SEQ_PKG_ImproperlyNestedSets , eErr_SEQ_PKG_SeqSubmitWithWgsSet , eErr_SEQ_PKG_InconsistentMoltypeSet ,
  eErr_SEQ_PKG_MissingAutodef , eErr_SEQ_PKG_InconsistentAutodef , SEQ_PKGEND , SEQ_FEATBEGIN = 4000 ,
  eErr_SEQ_FEAT_InvalidForType , eErr_SEQ_FEAT_PartialProblem , eErr_SEQ_FEAT_InvalidType , eErr_SEQ_FEAT_Range ,
  eErr_SEQ_FEAT_MixedStrand , eErr_SEQ_FEAT_AnticodonMixedStrand , eErr_SEQ_FEAT_GenomeSetMixedStrand , eErr_SEQ_FEAT_SeqLocOrder ,
  eErr_SEQ_FEAT_CdTransFail , eErr_SEQ_FEAT_StartCodon , eErr_SEQ_FEAT_InternalStop , eErr_SEQ_FEAT_NoProtein ,
  eErr_SEQ_FEAT_MisMatchAA , eErr_SEQ_FEAT_TransLen , eErr_SEQ_FEAT_NoStop , eErr_SEQ_FEAT_TranslExcept ,
  eErr_SEQ_FEAT_MissingProteinName , eErr_SEQ_FEAT_NotSpliceConsensus , eErr_SEQ_FEAT_OrfCdsHasProduct , eErr_SEQ_FEAT_GeneRefHasNoData ,
  eErr_SEQ_FEAT_ExceptInconsistent , eErr_SEQ_FEAT_ProtRefHasNoData , eErr_SEQ_FEAT_GenCodeMismatch , eErr_SEQ_FEAT_RNAtype0 ,
  eErr_SEQ_FEAT_UnknownImpFeatKey , eErr_SEQ_FEAT_UnknownImpFeatQual , eErr_SEQ_FEAT_WrongQualOnImpFeat , eErr_SEQ_FEAT_MissingQualOnImpFeat ,
  eErr_SEQ_FEAT_PseudoCdsHasProduct , eErr_SEQ_FEAT_IllegalDbXref , eErr_SEQ_FEAT_FarLocation , eErr_SEQ_FEAT_DuplicateFeat ,
  eErr_SEQ_FEAT_UnnecessaryGeneXref , eErr_SEQ_FEAT_TranslExceptPhase , eErr_SEQ_FEAT_TrnaCodonWrong , eErr_SEQ_FEAT_BothStrands ,
  eErr_SEQ_FEAT_CDSgeneRange , eErr_SEQ_FEAT_CDSmRNArange , eErr_SEQ_FEAT_OverlappingPeptideFeat , eErr_SEQ_FEAT_SerialInComment ,
  eErr_SEQ_FEAT_MultipleCDSproducts , eErr_SEQ_FEAT_FocusOnBioSourceFeature , eErr_SEQ_FEAT_PeptideFeatOutOfFrame , eErr_SEQ_FEAT_InvalidQualifierValue ,
  eErr_SEQ_FEAT_mRNAgeneRange , eErr_SEQ_FEAT_TranscriptLen , eErr_SEQ_FEAT_TranscriptMismatches , eErr_SEQ_FEAT_CDSproductPackagingProblem ,
  eErr_SEQ_FEAT_DuplicateExonInterval , eErr_SEQ_FEAT_DuplicateAnticodonInterval , eErr_SEQ_FEAT_PolyAsiteNotPoint , eErr_SEQ_FEAT_ImpFeatBadLoc ,
  eErr_SEQ_FEAT_LocOnSegmentedBioseq , eErr_SEQ_FEAT_UnnecessaryCitPubEquiv , eErr_SEQ_FEAT_ImpCDShasTranslation , eErr_SEQ_FEAT_ImpCDSnotPseudo ,
  eErr_SEQ_FEAT_MissingMRNAproduct , eErr_SEQ_FEAT_AbuttingIntervals , eErr_SEQ_FEAT_MultiIntervalGene , eErr_SEQ_FEAT_FeatContentDup ,
  eErr_SEQ_FEAT_BadProductSeqId , eErr_SEQ_FEAT_RnaProductMismatch , eErr_SEQ_FEAT_MissingCDSproduct , eErr_SEQ_FEAT_BadTrnaCodon ,
  eErr_SEQ_FEAT_BadTrnaAA , eErr_SEQ_FEAT_OnlyGeneXrefs , eErr_SEQ_FEAT_UTRdoesNotAbutCDS , eErr_SEQ_FEAT_BadConflictFlag ,
  eErr_SEQ_FEAT_ConflictFlagSet , eErr_SEQ_FEAT_LocusTagProblem , eErr_SEQ_FEAT_CollidingLocusTags , eErr_SEQ_FEAT_AltStartCodonException ,
  eErr_SEQ_FEAT_PartialsInconsistent , eErr_SEQ_FEAT_GenesInconsistent , eErr_SEQ_FEAT_DuplicateTranslExcept , eErr_SEQ_FEAT_TranslExceptAndRnaEditing ,
  eErr_SEQ_FEAT_NoNameForProtein , eErr_SEQ_FEAT_TaxonDbxrefOnFeature , eErr_SEQ_FEAT_UnindexedFeature , eErr_SEQ_FEAT_CDSmRNAmismatch ,
  eErr_SEQ_FEAT_UnnecessaryException , eErr_SEQ_FEAT_LocusTagProductMismatch , eErr_SEQ_FEAT_MrnaTransFail , eErr_SEQ_FEAT_PseudoCdsViaGeneHasProduct ,
  eErr_SEQ_FEAT_MissingGeneXref , eErr_SEQ_FEAT_FeatureCitationProblem , eErr_SEQ_FEAT_NestedSeqLocMix , eErr_SEQ_FEAT_WrongQualOnFeature ,
  eErr_SEQ_FEAT_MissingQualOnFeature , eErr_SEQ_FEAT_CodonQualifierUsed , eErr_SEQ_FEAT_UnknownFeatureQual , eErr_SEQ_FEAT_BadCharInAuthorName ,
  eErr_SEQ_FEAT_PolyATail , eErr_SEQ_FEAT_ProteinNameEndsInBracket , eErr_SEQ_FEAT_CDSwithMultipleMRNAs , eErr_SEQ_FEAT_MultipleEquivBioSources ,
  eErr_SEQ_FEAT_MultipleEquivPublications , eErr_SEQ_FEAT_BadFullLengthFeature , eErr_SEQ_FEAT_RedundantFields , eErr_SEQ_FEAT_CDSwithNoMRNAOverlap ,
  eErr_SEQ_FEAT_CDSwithNoMRNA , eErr_SEQ_FEAT_FeatureProductInconsistency , eErr_SEQ_FEAT_ImproperBondLocation , eErr_SEQ_FEAT_GeneXrefWithoutGene ,
  eErr_SEQ_FEAT_SeqFeatXrefProblem , eErr_SEQ_FEAT_ProductFetchFailure , eErr_SEQ_FEAT_SuspiciousGeneXref , eErr_SEQ_FEAT_MissingTrnaAA ,
  eErr_SEQ_FEAT_CollidingFeatureIDs , eErr_SEQ_FEAT_ExceptionProblem , eErr_SEQ_FEAT_PolyAsignalNotRange , eErr_SEQ_FEAT_OldLocusTagMismtach ,
  eErr_SEQ_FEAT_DuplicateGeneOntologyTerm , eErr_SEQ_FEAT_InvalidInferenceValue , eErr_SEQ_FEAT_HypotheticalProteinMismatch , eErr_SEQ_FEAT_FeatureRefersToAccession ,
  eErr_SEQ_FEAT_SelfReferentialProduct , eErr_SEQ_FEAT_ITSdoesNotAbutRRNA , eErr_SEQ_FEAT_FeatureSeqIDCaseDifference , eErr_SEQ_FEAT_FeatureLocationIsGi0 ,
  eErr_SEQ_FEAT_GapFeatureProblem , eErr_SEQ_FEAT_PseudoCdsHasProtXref , eErr_SEQ_FEAT_ErroneousException , eErr_SEQ_FEAT_SegmentedGeneProblem ,
  eErr_SEQ_FEAT_WholeLocation , eErr_SEQ_FEAT_BadEcNumberFormat , eErr_SEQ_FEAT_BadEcNumberValue , eErr_SEQ_FEAT_EcNumberProblem ,
  eErr_SEQ_FEAT_VectorContamination , eErr_SEQ_FEAT_MinusStrandProtein , eErr_SEQ_FEAT_BadProteinName , eErr_SEQ_FEAT_GeneXrefWithoutLocus ,
  eErr_SEQ_FEAT_UTRdoesNotExtendToEnd , eErr_SEQ_FEAT_CDShasTooManyXs , eErr_SEQ_FEAT_SuspiciousFrame , eErr_SEQ_FEAT_TerminalXDiscrepancy ,
  eErr_SEQ_FEAT_UnnecessaryTranslExcept , eErr_SEQ_FEAT_SuspiciousQualifierValue , eErr_SEQ_FEAT_NotSpliceConsensusDonor , eErr_SEQ_FEAT_NotSpliceConsensusAcceptor ,
  eErr_SEQ_FEAT_RareSpliceConsensusDonor , eErr_SEQ_FEAT_SeqFeatXrefNotReciprocal , eErr_SEQ_FEAT_SeqFeatXrefFeatureMissing , eErr_SEQ_FEAT_FeatureInsideGap ,
  eErr_SEQ_FEAT_FeatureCrossesGap , eErr_SEQ_FEAT_BadAuthorSuffix , eErr_SEQ_FEAT_BadAnticodonAA , eErr_SEQ_FEAT_BadAnticodonCodon ,
  eErr_SEQ_FEAT_AnticodonStrandConflict , eErr_SEQ_FEAT_UndesiredGeneSynonym , eErr_SEQ_FEAT_UndesiredProteinName , eErr_SEQ_FEAT_FeatureBeginsOrEndsInGap ,
  eErr_SEQ_FEAT_GeneOntologyTermMissingGOID , eErr_SEQ_FEAT_PseudoRnaHasProduct , eErr_SEQ_FEAT_PseudoRnaViaGeneHasProduct , eErr_SEQ_FEAT_BadRRNAcomponentOrder ,
  eErr_SEQ_FEAT_BadRRNAcomponentOverlap , eErr_SEQ_FEAT_MissingGeneLocusTag , eErr_SEQ_FEAT_MultipleProtRefs , eErr_SEQ_FEAT_BadInternalCharacter ,
  eErr_SEQ_FEAT_BadTrailingCharacter , eErr_SEQ_FEAT_BadTrailingHyphen , eErr_SEQ_FEAT_MultipleGeneOverlap , eErr_SEQ_FEAT_BadCharInAuthorLastName ,
  eErr_SEQ_FEAT_PseudoCDSmRNArange , eErr_SEQ_FEAT_ExtendablePartialProblem , eErr_SEQ_FEAT_GeneXrefNeeded , eErr_SEQ_FEAT_RubiscoProblem ,
  eErr_SEQ_FEAT_ProteinNameHasPMID , eErr_SEQ_FEAT_BadGeneOntologyFormat , eErr_SEQ_FEAT_InconsistentGeneOntologyTermAndId , eErr_SEQ_FEAT_DuplicateGeneConflictingLocusTag ,
  eErr_SEQ_FEAT_ShortIntron , eErr_SEQ_FEAT_GeneXrefStrandProblem , eErr_SEQ_FEAT_CDSmRNAXrefLocationProblem , eErr_SEQ_FEAT_LocusCollidesWithLocusTag ,
  eErr_SEQ_FEAT_IdenticalGeneSymbolAndSynonym , eErr_SEQ_FEAT_RptUnitRangeProblem , eErr_SEQ_FEAT_TooManyInferenceAccessions , eErr_SEQ_FEAT_SgmlPresentInText ,
  eErr_SEQ_FEAT_MissingLocation , eErr_SEQ_FEAT_MultipleBioseqs , eErr_SEQ_FEAT_DifferntIdTypesInSeqLoc , eErr_SEQ_FEAT_IntervalBeginsOrEndsInGap ,
  eErr_SEQ_FEAT_InconsistentRRNAstrands , eErr_SEQ_FEAT_CDSonMinusStrandMRNA , eErr_SEQ_FEAT_tRNAmRNAmixup , eErr_SEQ_FEAT_ProductLength ,
  eErr_SEQ_FEAT_InconsistentPseudogeneCounts , eErr_SEQ_FEAT_DeletedEcNumber , eErr_SEQ_FEAT_ReplacedEcNumber , eErr_SEQ_FEAT_SplitEcNumber ,
  eErr_SEQ_FEAT_PeptideFeatureLacksCDS , eErr_SEQ_FEAT_EcNumberDataMissing , eErr_SEQ_FEAT_ShortExon , eErr_SEQ_FEAT_ExtraProteinFeature ,
  eErr_SEQ_FEAT_AssemblyGapAdjacentToNs , eErr_SEQ_FEAT_AssemblyGapCoversSequence , eErr_SEQ_FEAT_FeatureBeginsOrEndsWithN , eErr_SEQ_FEAT_FeatureIsMostlyNs ,
  eErr_SEQ_FEAT_CDSonMinusStrandTranscribedRNA , eErr_SEQ_FEAT_MultipleGenCodes , eErr_SEQ_FEAT_InvalidFuzz , eErr_SEQ_FEAT_BadCDScomment ,
  eErr_SEQ_FEAT_IntronIsStopCodon , eErr_SEQ_FEAT_InconsistentPseudogeneValue , eErr_SEQ_FEAT_MultiIntervalIntron , eErr_SEQ_FEAT_SeqLocTypeProblem ,
  eErr_SEQ_FEAT_RefSeqInText , eErr_SEQ_FEAT_ColdShockProteinProblem , eErr_SEQ_FEAT_BadLocation , eErr_SEQ_FEAT_GenCodeInvalid ,
  eErr_SEQ_FEAT_TranslExceptIsPartial , eErr_SEQ_FEAT_GeneIdMismatch , eErr_SEQ_FEAT_ProductShouldBeWhole , eErr_SEQ_FEAT_CDSmRNAMismatchProteinIDs ,
  eErr_SEQ_FEAT_CDSmRNAMissingProteinIDs , eErr_SEQ_FEAT_CDSmRNAMismatchTranscriptIDs , eErr_SEQ_FEAT_CDSmRNAmismatchCount , eErr_SEQ_FEAT_CDSmRNAMismatchLocation ,
  eErr_SEQ_FEAT_CDSmRNANotMatched , eErr_SEQ_FEAT_PartialProblemHasStop , eErr_SEQ_FEAT_PartialProblemMismatch3Prime , eErr_SEQ_FEAT_PartialProblemMismatch5Prime ,
  eErr_SEQ_FEAT_PartialProblemNotSpliceConsensus3Prime , eErr_SEQ_FEAT_PartialProblemNotSpliceConsensus5Prime , eErr_SEQ_FEAT_PartialProblemmRNASequence5Prime , eErr_SEQ_FEAT_PartialProblemmRNASequence3Prime ,
  eErr_SEQ_FEAT_PartialProblemOrganelle5Prime , eErr_SEQ_FEAT_PartialProblemOrganelle3Prime , eErr_SEQ_FEAT_PartialProblem5Prime , eErr_SEQ_FEAT_PartialProblem3Prime ,
  eErr_SEQ_FEAT_PartialsInconsistentCDSProtein , eErr_SEQ_FEAT_InvalidPseudoQualifier , eErr_SEQ_FEAT_InvalidRptUnitRange , eErr_SEQ_FEAT_InvalidRptUnitSeqCharacters ,
  eErr_SEQ_FEAT_InvalidRepeatUnitLength , eErr_SEQ_FEAT_MismatchedAllele , eErr_SEQ_FEAT_InvalidOperonMatchesGene , eErr_SEQ_FEAT_InvalidPunctuation ,
  eErr_SEQ_FEAT_InvalidAlleleDuplicates , eErr_SEQ_FEAT_InvalidCompareRefSeqAccession , eErr_SEQ_FEAT_RepeatSeqDoNotMatch , eErr_SEQ_FEAT_RecombinationClassOtherNeedsNote ,
  eErr_SEQ_FEAT_RegulatoryClassOtherNeedsNote , eErr_SEQ_FEAT_UnparsedtRNAAnticodon , eErr_SEQ_FEAT_UnparsedtRNAProduct , eErr_SEQ_FEAT_rRNADoesNotHaveProduct ,
  eErr_SEQ_FEAT_InvalidCompareMissingVersion , eErr_SEQ_FEAT_InvalidCompareBadAccession , eErr_SEQ_FEAT_MobileElementInvalidQualifier , eErr_SEQ_FEAT_InvalidReplace ,
  eErr_SEQ_FEAT_InvalidVariationReplace , eErr_SEQ_FEAT_InvalidNumberQualifier , eErr_SEQ_FEAT_InvalidProductOnGene , eErr_SEQ_FEAT_InvalidMatchingReplace ,
  eErr_SEQ_FEAT_InvalidCodonStart , eErr_SEQ_FEAT_WrongQualOnCDS , eErr_SEQ_FEAT_EcNumberInCDSComment , eErr_SEQ_FEAT_EcNumberInProteinName ,
  eErr_SEQ_FEAT_EcNumberInProteinComment , eErr_SEQ_FEAT_EcNumberEmpty , eErr_SEQ_FEAT_GeneLocusCollidesWithLocusTag , eErr_SEQ_FEAT_LocusTagGeneLocusMatch ,
  eErr_SEQ_FEAT_LocusTagHasSpace , eErr_SEQ_FEAT_OldLocusTagBadFormat , eErr_SEQ_FEAT_OldLocusTagWithoutLocusTag , eErr_SEQ_FEAT_BadRRNAcomponentOverlapRRNA ,
  eErr_SEQ_FEAT_BadRRNAcomponentOverlapAndOrder , eErr_SEQ_FEAT_BadRRNAcomponentOverlapTRNA , eErr_SEQ_FEAT_NotSpliceConsensusAcceptorTerminalIntron , eErr_SEQ_FEAT_NotSpliceConsensusDonorTerminalIntron ,
  eErr_SEQ_FEAT_IdenticalMRNAtranscriptIDs , eErr_SEQ_FEAT_InvalidFeatureForMRNA , eErr_SEQ_FEAT_InvalidFeatureForNucleotide , eErr_SEQ_FEAT_InvalidFeatureForProtein ,
  eErr_SEQ_FEAT_InvalidRNAFeature , eErr_SEQ_FEAT_InvalidTRNAdata , eErr_SEQ_FEAT_mRNAUnnecessaryException , eErr_SEQ_FEAT_AssemblyGapFeatureProblem ,
  eErr_SEQ_FEAT_ExceptionMissingText , eErr_SEQ_FEAT_MiscFeatureNeedsNote , eErr_SEQ_FEAT_MissingExceptionFlag , eErr_SEQ_FEAT_NoCDSbetweenUTRs ,
  eErr_SEQ_FEAT_RepeatRegionNeedsNote , eErr_SEQ_FEAT_CDSrange , eErr_SEQ_FEAT_tRNArange , eErr_SEQ_FEAT_ExceptionRequiresLocusTag ,
  eErr_SEQ_FEAT_BadTranssplicedInterval , eErr_SEQ_FEAT_TRNAinsideTMRNA , eErr_SEQ_FEAT_IncorrectQualifierCapitalization , eErr_SEQ_FEAT_CDSdoesNotMatchVDJC ,
  eErr_SEQ_FEAT_GeneOnNucPositionOfPeptide , eErr_SEQ_FEAT_ShortTRNAIntron , eErr_SEQ_FEAT_BadCDScomponentOverlapTRNA , eErr_SEQ_FEAT_StrandOther ,
  SEQ_FEATEND , SEQ_ALIGNBEGIN = 5000 , eErr_SEQ_ALIGN_SeqIdProblem , eErr_SEQ_ALIGN_StrandRev ,
  eErr_SEQ_ALIGN_DensegLenStart , eErr_SEQ_ALIGN_StartLessthanZero , eErr_SEQ_ALIGN_StartMorethanBiolen , eErr_SEQ_ALIGN_EndLessthanZero ,
  eErr_SEQ_ALIGN_EndMorethanBiolen , eErr_SEQ_ALIGN_LenLessthanZero , eErr_SEQ_ALIGN_LenMorethanBiolen , eErr_SEQ_ALIGN_SumLenStart ,
  eErr_SEQ_ALIGN_AlignDimSeqIdNotMatch , eErr_SEQ_ALIGN_SegsDimSeqIdNotMatch , eErr_SEQ_ALIGN_FastaLike , eErr_SEQ_ALIGN_NullSegs ,
  eErr_SEQ_ALIGN_SegmentGap , eErr_SEQ_ALIGN_SegsDimOne , eErr_SEQ_ALIGN_AlignDimOne , eErr_SEQ_ALIGN_Segtype ,
  eErr_SEQ_ALIGN_BlastAligns , eErr_SEQ_ALIGN_PercentIdentity , eErr_SEQ_ALIGN_ShortAln , eErr_SEQ_ALIGN_UnexpectedAlignmentType ,
  eErr_SEQ_ALIGN_SegsDimMismatch , eErr_SEQ_ALIGN_SegsNumsegMismatch , eErr_SEQ_ALIGN_SegsStartsMismatch , eErr_SEQ_ALIGN_SegsPresentMismatch ,
  eErr_SEQ_ALIGN_SegsPresentStartsMismatch , eErr_SEQ_ALIGN_SegsPresentStrandsMismatch , eErr_SEQ_ALIGN_NucProtMixture , SEQ_ALIGNEND ,
  SEQ_GRAPHBEGIN = 6000 , eErr_SEQ_GRAPH_GraphMin , eErr_SEQ_GRAPH_GraphMax , eErr_SEQ_GRAPH_GraphBelow ,
  eErr_SEQ_GRAPH_GraphAbove , eErr_SEQ_GRAPH_GraphByteLen , eErr_SEQ_GRAPH_GraphOutOfOrder , eErr_SEQ_GRAPH_GraphBioseqLen ,
  eErr_SEQ_GRAPH_GraphSeqLitLen , eErr_SEQ_GRAPH_GraphSeqLocLen , eErr_SEQ_GRAPH_GraphStartPhase , eErr_SEQ_GRAPH_GraphStopPhase ,
  eErr_SEQ_GRAPH_GraphDiffNumber , eErr_SEQ_GRAPH_GraphACGTScore , eErr_SEQ_GRAPH_GraphNScore , eErr_SEQ_GRAPH_GraphGapScore ,
  eErr_SEQ_GRAPH_GraphOverlap , eErr_SEQ_GRAPH_GraphBioseqId , eErr_SEQ_GRAPH_GraphACGTScoreMany , eErr_SEQ_GRAPH_GraphNScoreMany ,
  eErr_SEQ_GRAPH_GraphLocInvalid , SEQ_GRAPHEND , SEQ_ANNOTBEGIN = 7000 , eErr_SEQ_ANNOT_AnnotIDs ,
  eErr_SEQ_ANNOT_AnnotLOCs , SEQ_ANNOTEND , INTERNALBEGIN = 8000 , eErr_INTERNAL_Exception ,
  INTERNALEND , eErr_MAX
}
 

Detailed Description

User-defined methods of the data storage class.

This file was originally generated by application DATATOOL using the following specifications: 'valerr.asn'.

New methods or data members can be added to it if needed. See also: ValidErrItem_.hpp

Definition in file ValidErrItem.hpp.

Macro Definition Documentation

◆ ERR_CODE_BEGIN

#define ERR_CODE_BEGIN (   x)    x##BEGIN

Definition at line 57 of file ValidErrItem.hpp.

◆ ERR_CODE_END

#define ERR_CODE_END (   x)    x##END

Definition at line 58 of file ValidErrItem.hpp.

Enumeration Type Documentation

◆ EErrType

enum EErrType
Enumerator
eErr_ALL 
eErr_UNKNOWN 
SEQ_INSTBEGIN 
eErr_SEQ_INST_ExtNotAllowed 
eErr_SEQ_INST_ExtBadOrMissing 
eErr_SEQ_INST_SeqDataNotFound 
eErr_SEQ_INST_SeqDataNotAllowed 
eErr_SEQ_INST_ReprInvalid 
eErr_SEQ_INST_CircularProtein 
eErr_SEQ_INST_BadProteinMoltype 
eErr_SEQ_INST_MolNotSet 
eErr_SEQ_INST_MolinfoOther 
eErr_SEQ_INST_FuzzyLen 
eErr_SEQ_INST_InvalidLen 
eErr_SEQ_INST_InvalidAlphabet 
eErr_SEQ_INST_SeqDataLenWrong 
eErr_SEQ_INST_SeqPortFail 
eErr_SEQ_INST_InvalidResidue 
eErr_SEQ_INST_StopInProtein 
eErr_SEQ_INST_PartialInconsistent 
eErr_SEQ_INST_ShortSeq 
eErr_SEQ_INST_NoIdOnBioseq 
eErr_SEQ_INST_BadDeltaSeq 
eErr_SEQ_INST_LongHtgsSequence 
eErr_SEQ_INST_LongLiteralSequence 
eErr_SEQ_INST_ConflictingIdsOnBioseq 
eErr_SEQ_INST_MolNuclAcid 
eErr_SEQ_INST_ConflictingBiomolTech 
eErr_SEQ_INST_SeqIdNameHasSpace 
eErr_SEQ_INST_IdOnMultipleBioseqs 
eErr_SEQ_INST_DuplicateSegmentReferences 
eErr_SEQ_INST_TrailingX 
eErr_SEQ_INST_BadSeqIdFormat 
eErr_SEQ_INST_PartsOutOfOrder 
eErr_SEQ_INST_BadSecondaryAccn 
eErr_SEQ_INST_ZeroGiNumber 
eErr_SEQ_INST_RnaDnaConflict 
eErr_SEQ_INST_HistoryGiCollision 
eErr_SEQ_INST_GiWithoutAccession 
eErr_SEQ_INST_MultipleAccessions 
eErr_SEQ_INST_HistAssemblyMissing 
eErr_SEQ_INST_TerminalNs 
eErr_SEQ_INST_UnexpectedIdentifierChange 
eErr_SEQ_INST_InternalNsInSeqLit 
eErr_SEQ_INST_SeqLitGapLength0 
eErr_SEQ_INST_TpaAssemblyProblem 
eErr_SEQ_INST_SeqLocLength 
eErr_SEQ_INST_MissingGaps 
eErr_SEQ_INST_CompleteTitleProblem 
eErr_SEQ_INST_CompleteCircleProblem 
eErr_SEQ_INST_BadHTGSeq 
eErr_SEQ_INST_GapInProtein 
eErr_SEQ_INST_BadProteinStart 
eErr_SEQ_INST_TerminalGap 
eErr_SEQ_INST_OverlappingDeltaRange 
eErr_SEQ_INST_LeadingX 
eErr_SEQ_INST_InternalNsInSeqRaw 
eErr_SEQ_INST_InternalNsAdjacentToGap 
eErr_SEQ_INST_CaseDifferenceInSeqID 
eErr_SEQ_INST_DeltaComponentIsGi0 
eErr_SEQ_INST_FarFetchFailure 
eErr_SEQ_INST_InternalGapsInSeqRaw 
eErr_SEQ_INST_SelfReferentialSequence 
eErr_SEQ_INST_WholeComponent 
eErr_SEQ_INST_TSAHistAssemblyMissing 
eErr_SEQ_INST_ProteinsHaveGeneralID 
eErr_SEQ_INST_HighNContent 
eErr_SEQ_INST_SeqLitDataLength0 
eErr_SEQ_INST_HighNContentStretch 
eErr_SEQ_INST_HighNContentPercent 
eErr_SEQ_INST_UnknownLengthGapNot100 
eErr_SEQ_INST_SeqGapProblem 
eErr_SEQ_INST_WGSMasterLacksStrucComm 
eErr_SEQ_INST_TSAMasterLacksStrucComm 
eErr_SEQ_INST_AllNs 
eErr_SEQ_INST_FarLocationExcludesFeatures 
eErr_SEQ_INST_ProteinShouldNotHaveGaps 
eErr_SEQ_INST_MitoMetazoanTooLong 
eErr_SEQ_INST_ESTshouldBemRNA 
eErr_SEQ_INST_HTGS_STS_GSS_WGSshouldBeGenomic 
eErr_SEQ_INST_HTGS_STS_GSS_WGSshouldNotBeRNA 
eErr_SEQ_INST_mRNAshouldBeSingleStranded 
eErr_SEQ_INST_TSAshouldBNotBeDNA 
eErr_SEQ_INST_GenomeSeqGapProblem 
eErr_SEQ_INST_SeqGapBadLinkage 
eErr_SEQ_INST_TSAseqGapProblem 
eErr_SEQ_INST_WGSseqGapProblem 
eErr_SEQ_INST_CompleteGenomeHasGaps 
eErr_SEQ_INST_HighNcontent5Prime 
eErr_SEQ_INST_HighNcontent3Prime 
eErr_SEQ_INST_HighNpercent5Prime 
eErr_SEQ_INST_HighNpercent3Prime 
eErr_SEQ_INST_CircBactGenomeProblem 
eErr_SEQ_INST_ContigsTooShort 
eErr_SEQ_INST_InstantiatedGapMismatch 
eErr_SEQ_INST_BadSeqIdCharacter 
eErr_SEQ_INST_BadSeqIdLength 
SEQ_INSTEND 
SEQ_DESCRBEGIN 
eErr_SEQ_DESCR_BioSourceMissing 
eErr_SEQ_DESCR_InvalidForType 
eErr_SEQ_DESCR_FileOpenCollision 
eErr_SEQ_DESCR_Unknown 
eErr_SEQ_DESCR_NoPubFound 
eErr_SEQ_DESCR_NoOrgFound 
eErr_SEQ_DESCR_MultipleBioSources 
eErr_SEQ_DESCR_NoMolInfoFound 
eErr_SEQ_DESCR_BadCountryCode 
eErr_SEQ_DESCR_NoTaxonID 
eErr_SEQ_DESCR_InconsistentBioSources 
eErr_SEQ_DESCR_MissingLineage 
eErr_SEQ_DESCR_SerialInComment 
eErr_SEQ_DESCR_BioSourceNeedsFocus 
eErr_SEQ_DESCR_BadOrganelleLocation 
eErr_SEQ_DESCR_MultipleChromosomes 
eErr_SEQ_DESCR_BadSubSource 
eErr_SEQ_DESCR_BadOrgMod 
eErr_SEQ_DESCR_InconsistentProteinTitle 
eErr_SEQ_DESCR_Inconsistent 
eErr_SEQ_DESCR_ObsoleteSourceLocation 
eErr_SEQ_DESCR_ObsoleteSourceQual 
eErr_SEQ_DESCR_StructuredSourceNote 
eErr_SEQ_DESCR_UnnecessaryBioSourceFocus 
eErr_SEQ_DESCR_RefGeneTrackingWithoutStatus 
eErr_SEQ_DESCR_UnwantedCompleteFlag 
eErr_SEQ_DESCR_CollidingPublications 
eErr_SEQ_DESCR_TransgenicProblem 
eErr_SEQ_DESCR_TaxonomyLookupProblem 
eErr_SEQ_DESCR_MultipleTitles 
eErr_SEQ_DESCR_RefGeneTrackingOnNonRefSeq 
eErr_SEQ_DESCR_BioSourceInconsistency 
eErr_SEQ_DESCR_FastaBracketTitle 
eErr_SEQ_DESCR_MissingText 
eErr_SEQ_DESCR_BadCollectionDate 
eErr_SEQ_DESCR_BadPCRPrimerSequence 
eErr_SEQ_DESCR_BadPunctuation 
eErr_SEQ_DESCR_BadPCRPrimerName 
eErr_SEQ_DESCR_BioSourceOnProtein 
eErr_SEQ_DESCR_BioSourceDbTagConflict 
eErr_SEQ_DESCR_DuplicatePCRPrimerSequence 
eErr_SEQ_DESCR_MultipleNames 
eErr_SEQ_DESCR_MultipleComments 
eErr_SEQ_DESCR_LatLonFormat 
eErr_SEQ_DESCR_LatLonRange 
eErr_SEQ_DESCR_LatLonValue 
eErr_SEQ_DESCR_LatLonCountry 
eErr_SEQ_DESCR_LatLonState 
eErr_SEQ_DESCR_BadSpecificHost 
eErr_SEQ_DESCR_RefGeneTrackingIllegalStatus 
eErr_SEQ_DESCR_ReplacedCountryCode 
eErr_SEQ_DESCR_BadInstitutionCode 
eErr_SEQ_DESCR_BadCollectionCode 
eErr_SEQ_DESCR_IncorrectlyFormattedVoucherID 
eErr_SEQ_DESCR_UnstructuredVoucher 
eErr_SEQ_DESCR_ChromosomeLocation 
eErr_SEQ_DESCR_MultipleSourceQualifiers 
eErr_SEQ_DESCR_UnbalancedParentheses 
eErr_SEQ_DESCR_IdenticalInstitutionCode 
eErr_SEQ_DESCR_BadCountryCapitalization 
eErr_SEQ_DESCR_WrongVoucherType 
eErr_SEQ_DESCR_TitleHasPMID 
eErr_SEQ_DESCR_BadKeyword 
eErr_SEQ_DESCR_NoOrganismInTitle 
eErr_SEQ_DESCR_MissingChromosome 
eErr_SEQ_DESCR_LatLonAdjacent 
eErr_SEQ_DESCR_BadStrucCommInvalidFieldName 
eErr_SEQ_DESCR_BadStrucCommInvalidFieldValue 
eErr_SEQ_DESCR_BadStrucCommMissingField 
eErr_SEQ_DESCR_BadStrucCommFieldOutOfOrder 
eErr_SEQ_DESCR_BadStrucCommMultipleFields 
eErr_SEQ_DESCR_BioSourceNeedsChromosome 
eErr_SEQ_DESCR_MolInfoConflictsWithBioSource 
eErr_SEQ_DESCR_FakeStructuredComment 
eErr_SEQ_DESCR_StructuredCommentPrefixOrSuffixMissing 
eErr_SEQ_DESCR_LatLonWater 
eErr_SEQ_DESCR_LatLonOffshore 
eErr_SEQ_DESCR_MissingPersonalCollectionName 
eErr_SEQ_DESCR_LatLonPrecision 
eErr_SEQ_DESCR_DBLinkProblem 
eErr_SEQ_DESCR_FinishedStatusForWGS 
eErr_SEQ_DESCR_BadTentativeName 
eErr_SEQ_DESCR_OrganismNotFound 
eErr_SEQ_DESCR_TaxonomyIsSpeciesProblem 
eErr_SEQ_DESCR_TaxonomyConsultRequired 
eErr_SEQ_DESCR_TaxonomyNucleomorphProblem 
eErr_SEQ_DESCR_InconsistentMolTypeBiomol 
eErr_SEQ_DESCR_BadInstitutionCountry 
eErr_SEQ_DESCR_AmbiguousSpecificHost 
eErr_SEQ_DESCR_BadAltitude 
eErr_SEQ_DESCR_RefGeneTrackingOnNucProtSet 
eErr_SEQ_DESCR_InconsistentDates 
eErr_SEQ_DESCR_MultipleTaxonIDs 
eErr_SEQ_DESCR_ScaffoldLacksBioProject 
eErr_SEQ_DESCR_CompleteGenomeLacksBioProject 
eErr_SEQ_DESCR_TaxonomyPlastidsProblem 
eErr_SEQ_DESCR_OrganismIsUndefinedSpecies 
eErr_SEQ_DESCR_SuspectedContaminatedCellLine 
eErr_SEQ_DESCR_WrongOrganismFor16SrRNA 
eErr_SEQ_DESCR_InconsistentWGSFlags 
eErr_SEQ_DESCR_TitleNotAppropriateForSet 
eErr_SEQ_DESCR_StrainContainsTaxInfo 
eErr_SEQ_DESCR_InconsistentBioSources_ConLocation 
eErr_SEQ_DESCR_InconsistentRefSeqMoltype 
eErr_SEQ_DESCR_InconsistentMolInfo 
eErr_SEQ_DESCR_InconsistentMolInfoTechnique 
eErr_SEQ_DESCR_InconsistentTaxName 
eErr_SEQ_DESCR_InconsistentMolType 
eErr_SEQ_DESCR_InconsistentGenBankblocks 
eErr_SEQ_DESCR_InconsistentTaxNameSet 
eErr_SEQ_DESCR_InconsistentTPA 
eErr_SEQ_DESCR_BacteriaMissingSourceQualifier 
eErr_SEQ_DESCR_BadBioSourceFrequencyValue 
eErr_SEQ_DESCR_BadPlasmidChromosomeLinkageName 
eErr_SEQ_DESCR_BadPlastidName 
eErr_SEQ_DESCR_EnvironSampleMissingQualifier 
eErr_SEQ_DESCR_InconsistentVirusMoltype 
eErr_SEQ_DESCR_InvalidMatingType 
eErr_SEQ_DESCR_InvalidSexQualifier 
eErr_SEQ_DESCR_InvalidTissueType 
eErr_SEQ_DESCR_MissingEnvironmentalSample 
eErr_SEQ_DESCR_MissingMetagenomicQualifier 
eErr_SEQ_DESCR_MissingPlasmidLocation 
eErr_SEQ_DESCR_MissingPlasmidName 
eErr_SEQ_DESCR_OrgModValueInvalid 
eErr_SEQ_DESCR_StrainWithEnvironSample 
eErr_SEQ_DESCR_UnculturedNeedsEnvSample 
eErr_SEQ_DESCR_BadTextInSourceQualifier 
eErr_SEQ_DESCR_OrgModMissingValue 
eErr_SEQ_DESCR_BadAssemblyName 
eErr_SEQ_DESCR_BadKeywordForStrucComm 
eErr_SEQ_DESCR_BadKeywordNoTechnique 
eErr_SEQ_DESCR_BadKeywordUnverified 
eErr_SEQ_DESCR_BadStrucCommInvalidPrefix 
eErr_SEQ_DESCR_BadStrucCommInvalidSuffix 
eErr_SEQ_DESCR_BINDoesNotMatch 
eErr_SEQ_DESCR_CollidingPubMedID 
eErr_SEQ_DESCR_CommentMissingText 
eErr_SEQ_DESCR_DBLinkBadAssembly 
eErr_SEQ_DESCR_DBLinkBadBioProject 
eErr_SEQ_DESCR_DBLinkBadBioSample 
eErr_SEQ_DESCR_DBLinkBadCapitalization 
eErr_SEQ_DESCR_DBLinkBadFormat 
eErr_SEQ_DESCR_DBLinkBadSRAaccession 
eErr_SEQ_DESCR_DBLinkMissingUserObject 
eErr_SEQ_DESCR_DBLinkOnSet 
eErr_SEQ_DESCR_InvalidForTypeGIBB 
eErr_SEQ_DESCR_InvalidMolInfo 
eErr_SEQ_DESCR_MoltypeOther 
eErr_SEQ_DESCR_MoltypeOtherGenetic 
eErr_SEQ_DESCR_MoltypeUnknown 
eErr_SEQ_DESCR_MultipleDBLinkObjects 
eErr_SEQ_DESCR_MultipleStrucComms 
eErr_SEQ_DESCR_NoKeywordHasTechnique 
eErr_SEQ_DESCR_NoSourceDescriptor 
eErr_SEQ_DESCR_NucleotideTechniqueOnProtein 
eErr_SEQ_DESCR_ProteinTechniqueOnNucleotide 
eErr_SEQ_DESCR_RegionMissingText 
eErr_SEQ_DESCR_StrucCommMissingPrefixOrSuffix 
eErr_SEQ_DESCR_StrucCommMissingUserObject 
eErr_SEQ_DESCR_SyntheticConstructNeedsArtificial 
eErr_SEQ_DESCR_SyntheticConstructWrongMolType 
eErr_SEQ_DESCR_TaxonomyAmbiguousName 
eErr_SEQ_DESCR_TaxonomyServiceProblem 
eErr_SEQ_DESCR_TitleMissingText 
eErr_SEQ_DESCR_TPAassemblyWithoutTPAKeyword 
eErr_SEQ_DESCR_UserObjectNoData 
eErr_SEQ_DESCR_UserObjectNoType 
eErr_SEQ_DESCR_WGSmasterLacksBioProject 
eErr_SEQ_DESCR_WGSmasterLacksBioSample 
eErr_SEQ_DESCR_WGSMasterLacksBothBioSampleBioProject 
eErr_SEQ_DESCR_WrongBiomolForTSA 
eErr_SEQ_DESCR_AmbiguousName 
eErr_SEQ_DESCR_ModifierTypeConflict 
eErr_SEQ_DESCR_AmbiguousModForward 
eErr_SEQ_DESCR_AmbiguousTypeMaterial 
eErr_SEQ_DESCR_EmptyOrgInput 
eErr_SEQ_DESCR_HostIdenticalToOrganism 
eErr_SEQ_DESCR_MultipleStrains 
eErr_SEQ_DESCR_BadVariety 
eErr_SEQ_DESCR_BadTypeMaterial 
eErr_SEQ_DESCR_TaxonomyNoCommonAncestor 
eErr_SEQ_DESCR_TaxonomyNoValidTaxids 
eErr_SEQ_DESCR_TaxonomyEmptyInput 
eErr_SEQ_DESCR_ChromosomeWithoutLocation 
eErr_SEQ_DESCR_TaxonomyBlankSample 
eErr_SEQ_DESCR_NonViralSegment 
eErr_SEQ_DESCR_BadGeoLocNameCode 
eErr_SEQ_DESCR_LatLonGeoLocName 
eErr_SEQ_DESCR_ReplacedGeoLocNameCode 
eErr_SEQ_DESCR_BadGeoLocNameCapitalization 
eErr_SEQ_DESCR_BadInstitutionGeoLocName 
SEQ_DESCREND 
GENERICBEGIN 
eErr_GENERIC_NonAsciiAsn 
eErr_GENERIC_Spell 
eErr_GENERIC_AuthorListHasEtAl 
eErr_GENERIC_MissingPubInfo 
eErr_GENERIC_UnnecessaryPubEquiv 
eErr_GENERIC_BadPageNumbering 
eErr_GENERIC_MedlineEntryPub 
eErr_GENERIC_BadDate 
eErr_GENERIC_StructuredCitGenCit 
eErr_GENERIC_CollidingSerialNumbers 
eErr_GENERIC_EmbeddedScript 
eErr_GENERIC_PublicationInconsistency 
eErr_GENERIC_SgmlPresentInText 
eErr_GENERIC_UnexpectedPubStatusComment 
eErr_GENERIC_PastReleaseDate 
eErr_GENERIC_MissingISOJTA 
eErr_GENERIC_MissingVolume 
eErr_GENERIC_MissingVolumeEpub 
eErr_GENERIC_MissingPages 
eErr_GENERIC_MissingPagesEpub 
eErr_GENERIC_BarcodeTooShort 
eErr_GENERIC_BarcodeMissingPrimers 
eErr_GENERIC_BarcodeMissingCountry 
eErr_GENERIC_BarcodeMissingVoucher 
eErr_GENERIC_BarcodeTooManyNs 
eErr_GENERIC_BarcodeBadCollectionDate 
eErr_GENERIC_BarcodeMissingOrderAssignment 
eErr_GENERIC_BarcodeLowTrace 
eErr_GENERIC_BarcodeFrameShift 
eErr_GENERIC_BarcodeStructuredVoucher 
eErr_GENERIC_BarcodeTestFails 
eErr_GENERIC_BarcodeTestPasses 
eErr_GENERIC_InvalidAsn 
eErr_GENERIC_DeltaSeqError 
eErr_GENERIC_DuplicateIDs 
eErr_GENERIC_MissingPubRequirement 
eErr_GENERIC_BadSubmissionAuthorName 
eErr_GENERIC_BarcodeMissingGeoLocName 
GENERICEND 
SEQ_PKGBEGIN 
eErr_SEQ_PKG_NoCdRegionPtr 
eErr_SEQ_PKG_NucProtProblem 
eErr_SEQ_PKG_SegSetProblem 
eErr_SEQ_PKG_EmptySet 
eErr_SEQ_PKG_NucProtNotSegSet 
eErr_SEQ_PKG_SegSetNotParts 
eErr_SEQ_PKG_SegSetMixedBioseqs 
eErr_SEQ_PKG_PartsSetMixedBioseqs 
eErr_SEQ_PKG_PartsSetHasSets 
eErr_SEQ_PKG_FeaturePackagingProblem 
eErr_SEQ_PKG_GenomicProductPackagingProblem 
eErr_SEQ_PKG_InconsistentMolInfoBiomols 
eErr_SEQ_PKG_ArchaicFeatureLocation 
eErr_SEQ_PKG_ArchaicFeatureProduct 
eErr_SEQ_PKG_GraphPackagingProblem 
eErr_SEQ_PKG_InternalGenBankSet 
eErr_SEQ_PKG_ConSetProblem 
eErr_SEQ_PKG_NoBioseqFound 
eErr_SEQ_PKG_INSDRefSeqPackaging 
eErr_SEQ_PKG_GPSnonGPSPackaging 
eErr_SEQ_PKG_RefSeqPopSet 
eErr_SEQ_PKG_BioseqSetClassNotSet 
eErr_SEQ_PKG_OrphanedProtein 
eErr_SEQ_PKG_MissingSetTitle 
eErr_SEQ_PKG_NucProtSetHasTitle 
eErr_SEQ_PKG_ComponentMissingTitle 
eErr_SEQ_PKG_SingleItemSet 
eErr_SEQ_PKG_MisplacedMolInfo 
eErr_SEQ_PKG_ImproperlyNestedSets 
eErr_SEQ_PKG_SeqSubmitWithWgsSet 
eErr_SEQ_PKG_InconsistentMoltypeSet 
eErr_SEQ_PKG_MissingAutodef 
eErr_SEQ_PKG_InconsistentAutodef 
SEQ_PKGEND 
SEQ_FEATBEGIN 
eErr_SEQ_FEAT_InvalidForType 
eErr_SEQ_FEAT_PartialProblem 
eErr_SEQ_FEAT_InvalidType 
eErr_SEQ_FEAT_Range 
eErr_SEQ_FEAT_MixedStrand 
eErr_SEQ_FEAT_AnticodonMixedStrand 
eErr_SEQ_FEAT_GenomeSetMixedStrand 
eErr_SEQ_FEAT_SeqLocOrder 
eErr_SEQ_FEAT_CdTransFail 
eErr_SEQ_FEAT_StartCodon 
eErr_SEQ_FEAT_InternalStop 
eErr_SEQ_FEAT_NoProtein 
eErr_SEQ_FEAT_MisMatchAA 
eErr_SEQ_FEAT_TransLen 
eErr_SEQ_FEAT_NoStop 
eErr_SEQ_FEAT_TranslExcept 
eErr_SEQ_FEAT_MissingProteinName 
eErr_SEQ_FEAT_NotSpliceConsensus 
eErr_SEQ_FEAT_OrfCdsHasProduct 
eErr_SEQ_FEAT_GeneRefHasNoData 
eErr_SEQ_FEAT_ExceptInconsistent 
eErr_SEQ_FEAT_ProtRefHasNoData 
eErr_SEQ_FEAT_GenCodeMismatch 
eErr_SEQ_FEAT_RNAtype0 
eErr_SEQ_FEAT_UnknownImpFeatKey 
eErr_SEQ_FEAT_UnknownImpFeatQual 
eErr_SEQ_FEAT_WrongQualOnImpFeat 
eErr_SEQ_FEAT_MissingQualOnImpFeat 
eErr_SEQ_FEAT_PseudoCdsHasProduct 
eErr_SEQ_FEAT_IllegalDbXref 
eErr_SEQ_FEAT_FarLocation 
eErr_SEQ_FEAT_DuplicateFeat 
eErr_SEQ_FEAT_UnnecessaryGeneXref 
eErr_SEQ_FEAT_TranslExceptPhase 
eErr_SEQ_FEAT_TrnaCodonWrong 
eErr_SEQ_FEAT_BothStrands 
eErr_SEQ_FEAT_CDSgeneRange 
eErr_SEQ_FEAT_CDSmRNArange 
eErr_SEQ_FEAT_OverlappingPeptideFeat 
eErr_SEQ_FEAT_SerialInComment 
eErr_SEQ_FEAT_MultipleCDSproducts 
eErr_SEQ_FEAT_FocusOnBioSourceFeature 
eErr_SEQ_FEAT_PeptideFeatOutOfFrame 
eErr_SEQ_FEAT_InvalidQualifierValue 
eErr_SEQ_FEAT_mRNAgeneRange 
eErr_SEQ_FEAT_TranscriptLen 
eErr_SEQ_FEAT_TranscriptMismatches 
eErr_SEQ_FEAT_CDSproductPackagingProblem 
eErr_SEQ_FEAT_DuplicateExonInterval 
eErr_SEQ_FEAT_DuplicateAnticodonInterval 
eErr_SEQ_FEAT_PolyAsiteNotPoint 
eErr_SEQ_FEAT_ImpFeatBadLoc 
eErr_SEQ_FEAT_LocOnSegmentedBioseq 
eErr_SEQ_FEAT_UnnecessaryCitPubEquiv 
eErr_SEQ_FEAT_ImpCDShasTranslation 
eErr_SEQ_FEAT_ImpCDSnotPseudo 
eErr_SEQ_FEAT_MissingMRNAproduct 
eErr_SEQ_FEAT_AbuttingIntervals 
eErr_SEQ_FEAT_MultiIntervalGene 
eErr_SEQ_FEAT_FeatContentDup 
eErr_SEQ_FEAT_BadProductSeqId 
eErr_SEQ_FEAT_RnaProductMismatch 
eErr_SEQ_FEAT_MissingCDSproduct 
eErr_SEQ_FEAT_BadTrnaCodon 
eErr_SEQ_FEAT_BadTrnaAA 
eErr_SEQ_FEAT_OnlyGeneXrefs 
eErr_SEQ_FEAT_UTRdoesNotAbutCDS 
eErr_SEQ_FEAT_BadConflictFlag 
eErr_SEQ_FEAT_ConflictFlagSet 
eErr_SEQ_FEAT_LocusTagProblem 
eErr_SEQ_FEAT_CollidingLocusTags 
eErr_SEQ_FEAT_AltStartCodonException 
eErr_SEQ_FEAT_PartialsInconsistent 
eErr_SEQ_FEAT_GenesInconsistent 
eErr_SEQ_FEAT_DuplicateTranslExcept 
eErr_SEQ_FEAT_TranslExceptAndRnaEditing 
eErr_SEQ_FEAT_NoNameForProtein 
eErr_SEQ_FEAT_TaxonDbxrefOnFeature 
eErr_SEQ_FEAT_UnindexedFeature 
eErr_SEQ_FEAT_CDSmRNAmismatch 
eErr_SEQ_FEAT_UnnecessaryException 
eErr_SEQ_FEAT_LocusTagProductMismatch 
eErr_SEQ_FEAT_MrnaTransFail 
eErr_SEQ_FEAT_PseudoCdsViaGeneHasProduct 
eErr_SEQ_FEAT_MissingGeneXref 
eErr_SEQ_FEAT_FeatureCitationProblem 
eErr_SEQ_FEAT_NestedSeqLocMix 
eErr_SEQ_FEAT_WrongQualOnFeature 
eErr_SEQ_FEAT_MissingQualOnFeature 
eErr_SEQ_FEAT_CodonQualifierUsed 
eErr_SEQ_FEAT_UnknownFeatureQual 
eErr_SEQ_FEAT_BadCharInAuthorName 
eErr_SEQ_FEAT_PolyATail 
eErr_SEQ_FEAT_ProteinNameEndsInBracket 
eErr_SEQ_FEAT_CDSwithMultipleMRNAs 
eErr_SEQ_FEAT_MultipleEquivBioSources 
eErr_SEQ_FEAT_MultipleEquivPublications 
eErr_SEQ_FEAT_BadFullLengthFeature 
eErr_SEQ_FEAT_RedundantFields 
eErr_SEQ_FEAT_CDSwithNoMRNAOverlap 
eErr_SEQ_FEAT_CDSwithNoMRNA 
eErr_SEQ_FEAT_FeatureProductInconsistency 
eErr_SEQ_FEAT_ImproperBondLocation 
eErr_SEQ_FEAT_GeneXrefWithoutGene 
eErr_SEQ_FEAT_SeqFeatXrefProblem 
eErr_SEQ_FEAT_ProductFetchFailure 
eErr_SEQ_FEAT_SuspiciousGeneXref 
eErr_SEQ_FEAT_MissingTrnaAA 
eErr_SEQ_FEAT_CollidingFeatureIDs 
eErr_SEQ_FEAT_ExceptionProblem 
eErr_SEQ_FEAT_PolyAsignalNotRange 
eErr_SEQ_FEAT_OldLocusTagMismtach 
eErr_SEQ_FEAT_DuplicateGeneOntologyTerm 
eErr_SEQ_FEAT_InvalidInferenceValue 
eErr_SEQ_FEAT_HypotheticalProteinMismatch 
eErr_SEQ_FEAT_FeatureRefersToAccession 
eErr_SEQ_FEAT_SelfReferentialProduct 
eErr_SEQ_FEAT_ITSdoesNotAbutRRNA 
eErr_SEQ_FEAT_FeatureSeqIDCaseDifference 
eErr_SEQ_FEAT_FeatureLocationIsGi0 
eErr_SEQ_FEAT_GapFeatureProblem 
eErr_SEQ_FEAT_PseudoCdsHasProtXref 
eErr_SEQ_FEAT_ErroneousException 
eErr_SEQ_FEAT_SegmentedGeneProblem 
eErr_SEQ_FEAT_WholeLocation 
eErr_SEQ_FEAT_BadEcNumberFormat 
eErr_SEQ_FEAT_BadEcNumberValue 
eErr_SEQ_FEAT_EcNumberProblem 
eErr_SEQ_FEAT_VectorContamination 
eErr_SEQ_FEAT_MinusStrandProtein 
eErr_SEQ_FEAT_BadProteinName 
eErr_SEQ_FEAT_GeneXrefWithoutLocus 
eErr_SEQ_FEAT_UTRdoesNotExtendToEnd 
eErr_SEQ_FEAT_CDShasTooManyXs 
eErr_SEQ_FEAT_SuspiciousFrame 
eErr_SEQ_FEAT_TerminalXDiscrepancy 
eErr_SEQ_FEAT_UnnecessaryTranslExcept 
eErr_SEQ_FEAT_SuspiciousQualifierValue 
eErr_SEQ_FEAT_NotSpliceConsensusDonor 
eErr_SEQ_FEAT_NotSpliceConsensusAcceptor 
eErr_SEQ_FEAT_RareSpliceConsensusDonor 
eErr_SEQ_FEAT_SeqFeatXrefNotReciprocal 
eErr_SEQ_FEAT_SeqFeatXrefFeatureMissing 
eErr_SEQ_FEAT_FeatureInsideGap 
eErr_SEQ_FEAT_FeatureCrossesGap 
eErr_SEQ_FEAT_BadAuthorSuffix 
eErr_SEQ_FEAT_BadAnticodonAA 
eErr_SEQ_FEAT_BadAnticodonCodon 
eErr_SEQ_FEAT_AnticodonStrandConflict 
eErr_SEQ_FEAT_UndesiredGeneSynonym 
eErr_SEQ_FEAT_UndesiredProteinName 
eErr_SEQ_FEAT_FeatureBeginsOrEndsInGap 
eErr_SEQ_FEAT_GeneOntologyTermMissingGOID 
eErr_SEQ_FEAT_PseudoRnaHasProduct 
eErr_SEQ_FEAT_PseudoRnaViaGeneHasProduct 
eErr_SEQ_FEAT_BadRRNAcomponentOrder 
eErr_SEQ_FEAT_BadRRNAcomponentOverlap 
eErr_SEQ_FEAT_MissingGeneLocusTag 
eErr_SEQ_FEAT_MultipleProtRefs 
eErr_SEQ_FEAT_BadInternalCharacter 
eErr_SEQ_FEAT_BadTrailingCharacter 
eErr_SEQ_FEAT_BadTrailingHyphen 
eErr_SEQ_FEAT_MultipleGeneOverlap 
eErr_SEQ_FEAT_BadCharInAuthorLastName 
eErr_SEQ_FEAT_PseudoCDSmRNArange 
eErr_SEQ_FEAT_ExtendablePartialProblem 
eErr_SEQ_FEAT_GeneXrefNeeded 
eErr_SEQ_FEAT_RubiscoProblem 
eErr_SEQ_FEAT_ProteinNameHasPMID 
eErr_SEQ_FEAT_BadGeneOntologyFormat 
eErr_SEQ_FEAT_InconsistentGeneOntologyTermAndId 
eErr_SEQ_FEAT_DuplicateGeneConflictingLocusTag 
eErr_SEQ_FEAT_ShortIntron 
eErr_SEQ_FEAT_GeneXrefStrandProblem 
eErr_SEQ_FEAT_CDSmRNAXrefLocationProblem 
eErr_SEQ_FEAT_LocusCollidesWithLocusTag 
eErr_SEQ_FEAT_IdenticalGeneSymbolAndSynonym 
eErr_SEQ_FEAT_RptUnitRangeProblem 
eErr_SEQ_FEAT_TooManyInferenceAccessions 
eErr_SEQ_FEAT_SgmlPresentInText 
eErr_SEQ_FEAT_MissingLocation 
eErr_SEQ_FEAT_MultipleBioseqs 
eErr_SEQ_FEAT_DifferntIdTypesInSeqLoc 
eErr_SEQ_FEAT_IntervalBeginsOrEndsInGap 
eErr_SEQ_FEAT_InconsistentRRNAstrands 
eErr_SEQ_FEAT_CDSonMinusStrandMRNA 
eErr_SEQ_FEAT_tRNAmRNAmixup 
eErr_SEQ_FEAT_ProductLength 
eErr_SEQ_FEAT_InconsistentPseudogeneCounts 
eErr_SEQ_FEAT_DeletedEcNumber 
eErr_SEQ_FEAT_ReplacedEcNumber 
eErr_SEQ_FEAT_SplitEcNumber 
eErr_SEQ_FEAT_PeptideFeatureLacksCDS 
eErr_SEQ_FEAT_EcNumberDataMissing 
eErr_SEQ_FEAT_ShortExon 
eErr_SEQ_FEAT_ExtraProteinFeature 
eErr_SEQ_FEAT_AssemblyGapAdjacentToNs 
eErr_SEQ_FEAT_AssemblyGapCoversSequence 
eErr_SEQ_FEAT_FeatureBeginsOrEndsWithN 
eErr_SEQ_FEAT_FeatureIsMostlyNs 
eErr_SEQ_FEAT_CDSonMinusStrandTranscribedRNA 
eErr_SEQ_FEAT_MultipleGenCodes 
eErr_SEQ_FEAT_InvalidFuzz 
eErr_SEQ_FEAT_BadCDScomment 
eErr_SEQ_FEAT_IntronIsStopCodon 
eErr_SEQ_FEAT_InconsistentPseudogeneValue 
eErr_SEQ_FEAT_MultiIntervalIntron 
eErr_SEQ_FEAT_SeqLocTypeProblem 
eErr_SEQ_FEAT_RefSeqInText 
eErr_SEQ_FEAT_ColdShockProteinProblem 
eErr_SEQ_FEAT_BadLocation 
eErr_SEQ_FEAT_GenCodeInvalid 
eErr_SEQ_FEAT_TranslExceptIsPartial 
eErr_SEQ_FEAT_GeneIdMismatch 
eErr_SEQ_FEAT_ProductShouldBeWhole 
eErr_SEQ_FEAT_CDSmRNAMismatchProteinIDs 
eErr_SEQ_FEAT_CDSmRNAMissingProteinIDs 
eErr_SEQ_FEAT_CDSmRNAMismatchTranscriptIDs 
eErr_SEQ_FEAT_CDSmRNAmismatchCount 
eErr_SEQ_FEAT_CDSmRNAMismatchLocation 
eErr_SEQ_FEAT_CDSmRNANotMatched 
eErr_SEQ_FEAT_PartialProblemHasStop 
eErr_SEQ_FEAT_PartialProblemMismatch3Prime 
eErr_SEQ_FEAT_PartialProblemMismatch5Prime 
eErr_SEQ_FEAT_PartialProblemNotSpliceConsensus3Prime 
eErr_SEQ_FEAT_PartialProblemNotSpliceConsensus5Prime 
eErr_SEQ_FEAT_PartialProblemmRNASequence5Prime 
eErr_SEQ_FEAT_PartialProblemmRNASequence3Prime 
eErr_SEQ_FEAT_PartialProblemOrganelle5Prime 
eErr_SEQ_FEAT_PartialProblemOrganelle3Prime 
eErr_SEQ_FEAT_PartialProblem5Prime 
eErr_SEQ_FEAT_PartialProblem3Prime 
eErr_SEQ_FEAT_PartialsInconsistentCDSProtein 
eErr_SEQ_FEAT_InvalidPseudoQualifier 
eErr_SEQ_FEAT_InvalidRptUnitRange 
eErr_SEQ_FEAT_InvalidRptUnitSeqCharacters 
eErr_SEQ_FEAT_InvalidRepeatUnitLength 
eErr_SEQ_FEAT_MismatchedAllele 
eErr_SEQ_FEAT_InvalidOperonMatchesGene 
eErr_SEQ_FEAT_InvalidPunctuation 
eErr_SEQ_FEAT_InvalidAlleleDuplicates 
eErr_SEQ_FEAT_InvalidCompareRefSeqAccession 
eErr_SEQ_FEAT_RepeatSeqDoNotMatch 
eErr_SEQ_FEAT_RecombinationClassOtherNeedsNote 
eErr_SEQ_FEAT_RegulatoryClassOtherNeedsNote 
eErr_SEQ_FEAT_UnparsedtRNAAnticodon 
eErr_SEQ_FEAT_UnparsedtRNAProduct 
eErr_SEQ_FEAT_rRNADoesNotHaveProduct 
eErr_SEQ_FEAT_InvalidCompareMissingVersion 
eErr_SEQ_FEAT_InvalidCompareBadAccession 
eErr_SEQ_FEAT_MobileElementInvalidQualifier 
eErr_SEQ_FEAT_InvalidReplace 
eErr_SEQ_FEAT_InvalidVariationReplace 
eErr_SEQ_FEAT_InvalidNumberQualifier 
eErr_SEQ_FEAT_InvalidProductOnGene 
eErr_SEQ_FEAT_InvalidMatchingReplace 
eErr_SEQ_FEAT_InvalidCodonStart 
eErr_SEQ_FEAT_WrongQualOnCDS 
eErr_SEQ_FEAT_EcNumberInCDSComment 
eErr_SEQ_FEAT_EcNumberInProteinName 
eErr_SEQ_FEAT_EcNumberInProteinComment 
eErr_SEQ_FEAT_EcNumberEmpty 
eErr_SEQ_FEAT_GeneLocusCollidesWithLocusTag 
eErr_SEQ_FEAT_LocusTagGeneLocusMatch 
eErr_SEQ_FEAT_LocusTagHasSpace 
eErr_SEQ_FEAT_OldLocusTagBadFormat 
eErr_SEQ_FEAT_OldLocusTagWithoutLocusTag 
eErr_SEQ_FEAT_BadRRNAcomponentOverlapRRNA 
eErr_SEQ_FEAT_BadRRNAcomponentOverlapAndOrder 
eErr_SEQ_FEAT_BadRRNAcomponentOverlapTRNA 
eErr_SEQ_FEAT_NotSpliceConsensusAcceptorTerminalIntron 
eErr_SEQ_FEAT_NotSpliceConsensusDonorTerminalIntron 
eErr_SEQ_FEAT_IdenticalMRNAtranscriptIDs 
eErr_SEQ_FEAT_InvalidFeatureForMRNA 
eErr_SEQ_FEAT_InvalidFeatureForNucleotide 
eErr_SEQ_FEAT_InvalidFeatureForProtein 
eErr_SEQ_FEAT_InvalidRNAFeature 
eErr_SEQ_FEAT_InvalidTRNAdata 
eErr_SEQ_FEAT_mRNAUnnecessaryException 
eErr_SEQ_FEAT_AssemblyGapFeatureProblem 
eErr_SEQ_FEAT_ExceptionMissingText 
eErr_SEQ_FEAT_MiscFeatureNeedsNote 
eErr_SEQ_FEAT_MissingExceptionFlag 
eErr_SEQ_FEAT_NoCDSbetweenUTRs 
eErr_SEQ_FEAT_RepeatRegionNeedsNote 
eErr_SEQ_FEAT_CDSrange 
eErr_SEQ_FEAT_tRNArange 
eErr_SEQ_FEAT_ExceptionRequiresLocusTag 
eErr_SEQ_FEAT_BadTranssplicedInterval 
eErr_SEQ_FEAT_TRNAinsideTMRNA 
eErr_SEQ_FEAT_IncorrectQualifierCapitalization 
eErr_SEQ_FEAT_CDSdoesNotMatchVDJC 
eErr_SEQ_FEAT_GeneOnNucPositionOfPeptide 
eErr_SEQ_FEAT_ShortTRNAIntron 
eErr_SEQ_FEAT_BadCDScomponentOverlapTRNA 
eErr_SEQ_FEAT_StrandOther 
SEQ_FEATEND 
SEQ_ALIGNBEGIN 
eErr_SEQ_ALIGN_SeqIdProblem 
eErr_SEQ_ALIGN_StrandRev 
eErr_SEQ_ALIGN_DensegLenStart 
eErr_SEQ_ALIGN_StartLessthanZero 
eErr_SEQ_ALIGN_StartMorethanBiolen 
eErr_SEQ_ALIGN_EndLessthanZero 
eErr_SEQ_ALIGN_EndMorethanBiolen 
eErr_SEQ_ALIGN_LenLessthanZero 
eErr_SEQ_ALIGN_LenMorethanBiolen 
eErr_SEQ_ALIGN_SumLenStart 
eErr_SEQ_ALIGN_AlignDimSeqIdNotMatch 
eErr_SEQ_ALIGN_SegsDimSeqIdNotMatch 
eErr_SEQ_ALIGN_FastaLike 
eErr_SEQ_ALIGN_NullSegs 
eErr_SEQ_ALIGN_SegmentGap 
eErr_SEQ_ALIGN_SegsDimOne 
eErr_SEQ_ALIGN_AlignDimOne 
eErr_SEQ_ALIGN_Segtype 
eErr_SEQ_ALIGN_BlastAligns 
eErr_SEQ_ALIGN_PercentIdentity 
eErr_SEQ_ALIGN_ShortAln 
eErr_SEQ_ALIGN_UnexpectedAlignmentType 
eErr_SEQ_ALIGN_SegsDimMismatch 
eErr_SEQ_ALIGN_SegsNumsegMismatch 
eErr_SEQ_ALIGN_SegsStartsMismatch 
eErr_SEQ_ALIGN_SegsPresentMismatch 
eErr_SEQ_ALIGN_SegsPresentStartsMismatch 
eErr_SEQ_ALIGN_SegsPresentStrandsMismatch 
eErr_SEQ_ALIGN_NucProtMixture 
SEQ_ALIGNEND 
SEQ_GRAPHBEGIN 
eErr_SEQ_GRAPH_GraphMin 
eErr_SEQ_GRAPH_GraphMax 
eErr_SEQ_GRAPH_GraphBelow 
eErr_SEQ_GRAPH_GraphAbove 
eErr_SEQ_GRAPH_GraphByteLen 
eErr_SEQ_GRAPH_GraphOutOfOrder 
eErr_SEQ_GRAPH_GraphBioseqLen 
eErr_SEQ_GRAPH_GraphSeqLitLen 
eErr_SEQ_GRAPH_GraphSeqLocLen 
eErr_SEQ_GRAPH_GraphStartPhase 
eErr_SEQ_GRAPH_GraphStopPhase 
eErr_SEQ_GRAPH_GraphDiffNumber 
eErr_SEQ_GRAPH_GraphACGTScore 
eErr_SEQ_GRAPH_GraphNScore 
eErr_SEQ_GRAPH_GraphGapScore 
eErr_SEQ_GRAPH_GraphOverlap 
eErr_SEQ_GRAPH_GraphBioseqId 
eErr_SEQ_GRAPH_GraphACGTScoreMany 
eErr_SEQ_GRAPH_GraphNScoreMany 
eErr_SEQ_GRAPH_GraphLocInvalid 
SEQ_GRAPHEND 
SEQ_ANNOTBEGIN 
eErr_SEQ_ANNOT_AnnotIDs 
eErr_SEQ_ANNOT_AnnotLOCs 
SEQ_ANNOTEND 
INTERNALBEGIN 
eErr_INTERNAL_Exception 
INTERNALEND 
eErr_MAX 

Definition at line 68 of file ValidErrItem.hpp.

Modified on Wed Jun 12 11:12:34 2024 by modify_doxy.py rev. 669887