NCBI C++ ToolKit
Classes | Functions | Variables
agpconvert.cpp File Reference
#include <ncbi_pch.hpp>
#include <corelib/ncbiapp.hpp>
#include <corelib/ncbienv.hpp>
#include <corelib/ncbiargs.hpp>
#include <corelib/ncbifile.hpp>
#include <objtools/readers/agp_converter.hpp>
#include <serial/serial.hpp>
#include <serial/objostr.hpp>
#include <serial/objistr.hpp>
#include <objects/general/Object_id.hpp>
#include <objects/general/Date.hpp>
#include <objects/seqset/Seq_entry.hpp>
#include <objects/seqset/Bioseq_set.hpp>
#include <objects/seqloc/Seq_id.hpp>
#include <objtools/readers/fasta.hpp>
#include <objects/seq/Bioseq.hpp>
#include <objects/seq/Seq_inst.hpp>
#include <objects/seq/Seqdesc.hpp>
#include <objtools/readers/agp_seq_entry.hpp>
#include <objects/seq/Seq_literal.hpp>
#include <objects/seq/Seq_descr.hpp>
#include <objects/seq/Seq_ext.hpp>
#include <objects/seq/Delta_seq.hpp>
#include <objects/seq/Delta_ext.hpp>
#include <objects/general/Int_fuzz.hpp>
#include <objects/seqloc/Seq_loc.hpp>
#include <objects/seqloc/Seq_interval.hpp>
#include <objects/seqfeat/SubSource.hpp>
#include <objects/seqfeat/BioSource.hpp>
#include <corelib/ncbitime.hpp>
#include <corelib/ncbiexec.hpp>
#include <objects/submit/Seq_submit.hpp>
#include <objects/submit/Submit_block.hpp>
#include <objects/general/Dbtag.hpp>
#include <objects/seqfeat/Org_ref.hpp>
#include <objects/seqfeat/OrgMod.hpp>
#include <objects/seqfeat/OrgName.hpp>
#include <objects/taxon1/taxon1.hpp>
#include <objects/pub/Pub.hpp>
#include <objects/biblio/Cit_sub.hpp>
#include <objects/seq/Pubdesc.hpp>
#include <objects/pub/Pub_equiv.hpp>
#include <objects/misc/sequence_macros.hpp>
#include <objmgr/scope.hpp>
#include <objtools/data_loaders/genbank/gbloader.hpp>
#include <util/xregexp/regexp.hpp>
#include <util/format_guess.hpp>
#include <algorithm>
+ Include dependency graph for agpconvert.cpp:

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Classes

class  CAgpconvertApplication
 
class  CAgpconvertApplication::CCustomErrorHandler
 
class  CAgpconvertApplication::CAsnvalRunner
 
struct  SIsOldName
 

Functions

 USING_SCOPE (objects)
 
static TTaxId s_GetTaxid (const COrg_ref &org_ref)
 
int main (int argc, const char *argv[])
 

Variables

 USING_NCBI_SCOPE
 

Function Documentation

◆ main()

int main ( int  argc,
const char *  argv[] 
)

◆ s_GetTaxid()

static TTaxId s_GetTaxid ( const COrg_ref org_ref)
static

◆ USING_SCOPE()

USING_SCOPE ( objects  )

Variable Documentation

◆ USING_NCBI_SCOPE

USING_NCBI_SCOPE

Definition at line 90 of file agpconvert.cpp.

Modified on Mon Jun 17 05:07:37 2024 by modify_doxy.py rev. 669887