NCBI C++ ToolKit
Classes | Functions
blast_format.hpp File Reference

Produce formatted blast output for command line applications. More...

#include <corelib/ncbi_limits.hpp>
#include <algo/blast/api/sseqloc.hpp>
#include <algo/blast/api/setup_factory.hpp>
#include <algo/blast/api/uniform_search.hpp>
#include <algo/blast/api/blast_results.hpp>
#include <algo/blast/igblast/igblast.hpp>
#include <algo/blast/api/psiblast_iteration.hpp>
#include <algo/blast/core/blast_seqsrc.h>
#include <objtools/align_format/tabular.hpp>
#include <objtools/align_format/showalign.hpp>
#include <objtools/align_format/showdefline.hpp>
#include <objtools/align_format/taxFormat.hpp>
#include <algo/blast/format/blastfmtutil.hpp>
#include <algo/blast/blastinput/blast_input.hpp>
#include <algo/blast/blastinput/blast_args.hpp>
#include <algo/blast/api/local_db_adapter.hpp>
#include <algo/blast/api/blast_seqinfosrc.hpp>
#include <algo/blast/format/sam.hpp>
#include <objects/blast/blast__.hpp>
#include <algo/blast/api/blast_usage_report.hpp>
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Classes

class  CBlastFormat
 This class formats the BLAST results for command line applications. More...
 
struct  CBlastFormat::SClone
 igblast clone info More...
 

Functions

 USING_SCOPE (align_format)
 

Detailed Description

Produce formatted blast output for command line applications.

Definition in file blast_format.hpp.

Function Documentation

◆ USING_SCOPE()

USING_SCOPE ( align_format  )
Modified on Mon Jul 22 05:07:51 2024 by modify_doxy.py rev. 669887