NCBI C++ ToolKit
Functions
aln_writer.cpp File Reference
#include <ncbi_pch.hpp>
#include <objects/seqalign/Seq_align.hpp>
#include <objects/seqalign/Dense_seg.hpp>
#include <objects/seqalign/Spliced_seg.hpp>
#include <objects/seqalign/Spliced_exon.hpp>
#include <objects/seqalign/Sparse_seg.hpp>
#include <objects/seqalign/Sparse_align.hpp>
#include <objects/seqalign/Product_pos.hpp>
#include <objects/seqalign/Prot_pos.hpp>
#include <objects/seqalign/Spliced_exon_chunk.hpp>
#include <objects/general/Object_id.hpp>
#include <objects/seq/seq_id_handle.hpp>
#include <objmgr/scope.hpp>
#include <objmgr/bioseq_handle.hpp>
#include <objmgr/seq_vector.hpp>
#include <objmgr/util/sequence.hpp>
#include <objtools/writers/writer_exception.hpp>
#include <objtools/writers/write_util.hpp>
#include <objtools/writers/aln_writer.hpp>
#include <util/sequtil/sequtil_manip.hpp>
+ Include dependency graph for aln_writer.cpp:

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Functions

 USING_SCOPE (objects)
 
unsigned int s_ProductLength (const CProduct_pos &start, const CProduct_pos &end)
 

Function Documentation

◆ s_ProductLength()

unsigned int s_ProductLength ( const CProduct_pos start,
const CProduct_pos end 
)

◆ USING_SCOPE()

USING_SCOPE ( objects  )
Modified on Sun Feb 25 03:08:01 2024 by modify_doxy.py rev. 669887