NCBI C++ ToolKit
Functions
bed_coverage_graph.cpp File Reference
#include <ncbi_pch.hpp>
#include <gui/widgets/seq_graphic/bed_coverage_graph.hpp>
#include <gui/widgets/seq_graphic/graph_cache.hpp>
#include <gui/utils/rmtfilestatus.hpp>
#include <gui/utils/url_utils.hpp>
#include <objmgr/scope.hpp>
#include <objects/seq/seq_id_handle.hpp>
#include <util/bitset/bmserial.h>
#include <util/bitset/bmsparsevec_serial.h>
#include <util/checksum.hpp>
#include <corelib/rwstream.hpp>
#include <connect/ncbi_conn_stream.hpp>
#include <corelib/ncbiexec.hpp>
+ Include dependency graph for bed_coverage_graph.cpp:

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Functions

 USING_SCOPE (objects)
 
static bool s_ReadData (ICache &icache, const string &data_key, int &bin_count, bm::sparse_vector< unsigned, bm::bvector<> > &sv, bm::word_t *tb)
 
void s_GetBigBedSummary (const string &data_url, const string &chrom, const string &from, const string &to, int bin_count, vector< unsigned int > &data_points)
 
void s_GetBigBedFeats (const string &data_url, const string &chrom, const string &from, const string &to, vector< TSeqRange > &ranges)
 

Function Documentation

◆ s_GetBigBedFeats()

void s_GetBigBedFeats ( const string data_url,
const string chrom,
const string from,
const string to,
vector< TSeqRange > &  ranges 
)

◆ s_GetBigBedSummary()

void s_GetBigBedSummary ( const string data_url,
const string chrom,
const string from,
const string to,
int  bin_count,
vector< unsigned int > &  data_points 
)

◆ s_ReadData()

static bool s_ReadData ( ICache icache,
const string data_key,
int bin_count,
bm::sparse_vector< unsigned, bm::bvector<> > &  sv,
bm::word_t tb 
)
static

◆ USING_SCOPE()

USING_SCOPE ( objects  )
Modified on Tue Feb 27 05:56:27 2024 by modify_doxy.py rev. 669887