#include <ncbi_pch.hpp>#include <corelib/ncbiapp.hpp>#include <corelib/ncbistre.hpp>#include <serial/iterator.hpp>#include <algo/blast/api/version.hpp>#include <algo/blast/api/remote_blast.hpp>#include <algo/blast/blastinput/blast_input_aux.hpp>#include <algo/blast/format/blast_format.hpp>#include <algo/blast/api/objmgr_query_data.hpp>#include "../blast/blast_app_util.hpp"#include <algo/blast/vdb/vdb2blast_util.hpp>#include <algo/blast/vdb/vdbalias.hpp>#include "blast_vdb_app_util.hpp"
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Classes | |
| class | CBlastFormatterVdbApp |
| The application class. More... | |
Macros | |
| #define | EXIT_CODE__UNKNOWN_RID 1 |
| #define | EXIT_CODE__SEARCH_PENDING 2 |
| #define | EXIT_CODE__SEARCH_FAILED 3 |
Functions | |
| USING_SCOPE (blast) | |
| static void | s_FillDBInfo (CBlastFormatUtil::SDbInfo &dbInfo, const string &dbNames, bool isProtein) |
| int | main (int argc, const char *argv[]) |
Variables | |
| USING_NCBI_SCOPE | |
Macro Definition Documentation
◆ EXIT_CODE__SEARCH_FAILED
| #define EXIT_CODE__SEARCH_FAILED 3 |
Definition at line 350 of file blast_formatter_vdb.cpp.
◆ EXIT_CODE__SEARCH_PENDING
| #define EXIT_CODE__SEARCH_PENDING 2 |
Definition at line 349 of file blast_formatter_vdb.cpp.
◆ EXIT_CODE__UNKNOWN_RID
| #define EXIT_CODE__UNKNOWN_RID 1 |
Definition at line 348 of file blast_formatter_vdb.cpp.
Function Documentation
◆ main()
Definition at line 439 of file blast_formatter_vdb.cpp.
References CNcbiApplicationAPI::AppMain(), and eDS_Default.
◆ s_FillDBInfo()
|
static |
Definition at line 226 of file blast_formatter_vdb.cpp.
References CVDBBlastUtil::GetVDBStats(), and int.
Referenced by CBlastFormatterVdbApp::PrintFormattedOutput().
◆ USING_SCOPE()
| USING_SCOPE | ( | blast | ) |
Variable Documentation
◆ USING_NCBI_SCOPE
| USING_NCBI_SCOPE |
Definition at line 48 of file blast_formatter_vdb.cpp.
