NCBI C++ ToolKit
blast_vdb_app_util.cpp File Reference

Utility functions for BLAST VDB command line applications. More...

#include <ncbi_pch.hpp>
#include "blast_vdb_app_util.hpp"
#include <serial/serial.hpp>
#include <serial/objostr.hpp>
#include <algo/blast/vdb/vdb2blast_util.hpp>
#include <algo/blast/vdb/vdbalias.hpp>
+ Include dependency graph for blast_vdb_app_util.cpp:

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 USING_SCOPE (objects)
 USING_SCOPE (blast)
void SortAndFetchSeqData (const blast::CSearchResultSet &results, CRef< CScope > scope, CScope::TBioseqHandles &handles)
static void s_RegisterLocalDataLoader (list< string > &search_list, set< string > &local_paths, CRef< CObjectManager > &om, vector< string > &dl_local)
CRef< CScopeGetVDBScope (string dbAllNames)

Detailed Description

Utility functions for BLAST VDB command line applications.

Definition in file blast_vdb_app_util.cpp.

Function Documentation

◆ GetVDBScope()

CRef<CScope> GetVDBScope ( string  dbAllNames)

◆ s_RegisterLocalDataLoader()

static void s_RegisterLocalDataLoader ( list< string > &  search_list,
set< string > &  local_paths,
CRef< CObjectManager > &  om,
vector< string > &  dl_local 

◆ SortAndFetchSeqData()

void SortAndFetchSeqData ( const blast::CSearchResultSet &  results,
CRef< CScope scope,
CScope::TBioseqHandles handles 

◆ USING_SCOPE() [1/2]

USING_SCOPE ( blast  )

◆ USING_SCOPE() [2/2]

USING_SCOPE ( objects  )
Modified on Sat Apr 13 11:45:20 2024 by rev. 669887