NCBI C++ ToolKit
|
BLASTN command line application. More...
#include <ncbi_pch.hpp>
#include <corelib/ncbiapp.hpp>
#include <algo/blast/api/local_blast.hpp>
#include <algo/blast/api/remote_blast.hpp>
#include <algo/blast/blastinput/blast_fasta_input.hpp>
#include <algo/blast/blastinput/blastn_args.hpp>
#include <algo/blast/api/objmgr_query_data.hpp>
#include <algo/blast/format/blast_format.hpp>
#include <util/profile/rtprofile.hpp>
#include "blast_app_util.hpp"
#include "blastn_node.hpp"
Go to the source code of this file.
Go to the SVN repository for this file.
Classes | |
class | CBlastnApp |
Functions | |
USING_SCOPE (blast) | |
USING_SCOPE (objects) | |
static void | s_GetMT1Cutoffs (const int word_size, Int8 &max_db_size, Int8 &min_q_size) |
int | NcbiSys_main (int argc, ncbi::TXChar *argv[]) |
Variables | |
USING_NCBI_SCOPE | |
BLASTN command line application.
Definition in file blastn_app.cpp.
int NcbiSys_main | ( | int | argc, |
ncbi::TXChar * | argv[] | ||
) |
Definition at line 407 of file blastn_app.cpp.
References CNcbiApplicationAPI::AppMain().
Definition at line 96 of file blastn_app.cpp.
Referenced by CBlastnApp::Run().
USING_SCOPE | ( | blast | ) |
USING_SCOPE | ( | objects | ) |
USING_NCBI_SCOPE |
Definition at line 47 of file blastn_app.cpp.