blastxml2_format.hpp File Reference

#include <objects/seqloc/Seq_loc.hpp>
#include <objmgr/scope.hpp>
#include <objects/seqalign/Seq_align_set.hpp>
#include <objtools/align_format/showalign.hpp>
#include <algo/blast/format/blastfmtutil.hpp>
#include <objects/seq/seqlocinfo.hpp>

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Classes
class	IBlastXML2ReportData
	Interface for filling the top layer of the XML report. More...

Functions
void	BlastXML2_FormatReport (const IBlastXML2ReportData *data, CNcbiOstream *out_stream)
	Fills all fields in the XML BLAST v2 output object. More...
void	BlastXML2_FormatReport (const IBlastXML2ReportData *data, string file_name)
void	BlastXML2_PrintHeader (CNcbiOstream *out_stream)
void	BlastXML2_FormatError (int exit_code, string err_msg, CNcbiOstream *out_stream)
void	BlastJSON_FormatReport (const IBlastXML2ReportData *data, string file_name)
void	BlastJSON_FormatReport (const IBlastXML2ReportData *data, CNcbiOstream *out_stream)
void	BlastJSON_PrintHeader (CNcbiOstream *out_stream)