NCBI C++ ToolKit
Classes
build_db.hpp File Reference

Code to build a database given various sources of sequence data. More...

#include <corelib/ncbistd.hpp>
#include <objtools/blast/seqdb_reader/seqdbexpert.hpp>
#include <objtools/blast/seqdb_writer/writedb.hpp>
#include <objmgr/object_manager.hpp>
#include <objmgr/scope.hpp>
#include <objtools/blast/seqdb_writer/taxid_set.hpp>
#include <objtools/blast/seqdb_writer/multisource_util.hpp>
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Classes

class  IBioseqSource
 Interface to a source of Bioseq objects. More...
 
class  IRawSequenceSource
 Interface to a source of raw sequence data. More...
 
class  IMaskDataSource
 An interface providing lookups of mask-data by Seq-id. More...
 
class  CBuildDatabase
 Build BlastDB format databases from various data sources. More...
 

Detailed Description

Code to build a database given various sources of sequence data.

Definition in file build_db.hpp.

Modified on Wed May 15 15:05:39 2024 by modify_doxy.py rev. 669887