CAutoAddDesc Class Reference

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#include <objects/seq/Seq_descr.hpp>

Inheritance diagram for CAutoAddDesc:

Collaboration diagram for CAutoAddDesc:

Public Member Functions
	CAutoAddDesc (CSeq_descr &descr, CSeqdesc::E_Choice which)
const CSeqdesc &	Get () const
CSeqdesc &	Set (bool skip_lookup=false)
bool	IsNull () const
void	Erase ()

Static Public Member Functions
static CRef< CSeqdesc >	LocateDesc (const CSeq_descr &descr, CSeqdesc::E_Choice which)
static bool	EraseDesc (CSeq_descr &descr, CSeqdesc::E_Choice which)

Protected Attributes
CSeqdesc::E_Choice	m_which
CRef< CSeq_descr >	m_descr
CRef< CSeqdesc >	m_desc

Private Member Functions
	CAutoAddDesc ()
	CAutoAddDesc (const CAutoAddDesc &)

Detailed Description

Definition at line 86 of file Seq_descr.hpp.

Constructor & Destructor Documentation

CAutoAddDesc() [1/3]

CAutoAddDesc::CAutoAddDesc ( CSeq_descr &  descr, CSeqdesc::E_Choice  which  )

inline

Definition at line 114 of file Seq_descr.hpp.

References m_descr, m_which, and CRef< C, Locker >::Reset().

CAutoAddDesc() [2/3]

CAutoAddDesc::CAutoAddDesc ( )

private

CAutoAddDesc() [3/3]

CAutoAddDesc::CAutoAddDesc ( const CAutoAddDesc &  )

private

Member Function Documentation

Erase()

void CAutoAddDesc::Erase

(

)

Definition at line 117 of file Seq_descr.cpp.

References IsNull(), m_descr, Set(), and CSeq_descr_Base::Set().

EraseDesc()

bool CAutoAddDesc::EraseDesc ( CSeq_descr &  descr, CSeqdesc::E_Choice  which  )

static

Definition at line 123 of file Seq_descr.cpp.

References CSeq_descr_Base::Set().

Referenced by CTable2AsnContext::ApplyCreateUpdateDates().

Get()

const CSeqdesc & CAutoAddDesc::Get

(

void

)

const

Definition at line 86 of file Seq_descr.cpp.

References CRef< C, Locker >::IsNull(), LocateDesc(), m_desc, m_descr, and m_which.

IsNull()

bool CAutoAddDesc::IsNull

(

void

)

const

Definition at line 79 of file Seq_descr.cpp.

References CRef< C, Locker >::IsNull(), LocateDesc(), m_desc, m_descr, and m_which.

Referenced by CFastaReaderEx::AssembleSeq(), and Erase().

LocateDesc()

CRef< CSeqdesc > CAutoAddDesc::LocateDesc ( const CSeq_descr &  descr, CSeqdesc::E_Choice  which  )

static

Definition at line 106 of file Seq_descr.cpp.

References CSeq_descr_Base::Get(), and ITERATE.

Referenced by Get(), IsNull(), CTable2AsnContext::MergeSeqDescr(), and Set().

Set()

CSeqdesc & CAutoAddDesc::Set

(

bool

skip_lookup = false

)

Definition at line 93 of file Seq_descr.cpp.

References CRef< C, Locker >::IsNull(), LocateDesc(), m_desc, m_descr, m_which, CRef< C, Locker >::Reset(), and CSeq_descr_Base::Set().

Referenced by CCleanup::AddProteinTitle(), CTable2AsnContext::ApplyUpdateDate(), CFastaReaderEx::AssembleSeq(), Erase(), CSourceModParser::x_ApplyMods(), CFeatureTableReader::xAddProteinToSeqEntry(), CFeatureTableReader::xConvertSeqIntoSeqSet(), CFeatTableEdit::xGenerate_mRNA_Product(), and CFeatureTableReader::xTranslateProtein().

Member Data Documentation

m_desc

CRef<CSeqdesc> CAutoAddDesc::m_desc

mutableprotected

Definition at line 109 of file Seq_descr.hpp.

Referenced by Get(), IsNull(), and Set().

m_descr

CRef<CSeq_descr> CAutoAddDesc::m_descr

protected

Definition at line 108 of file Seq_descr.hpp.

Referenced by CAutoAddDesc(), CAutoInitDesc< _T >::CAutoInitDesc(), Erase(), Get(), IsNull(), and Set().

m_which

CSeqdesc::E_Choice CAutoAddDesc::m_which

protected

Definition at line 107 of file Seq_descr.hpp.

Referenced by CAutoAddDesc(), Get(), IsNull(), and Set().

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The documentation for this class was generated from the following files:

• include/objects/seq/Seq_descr.hpp
• src/objects/seq/Seq_descr.cpp