Search Toolkit Book for CBiostruc_feature_Base::C_Location
#include <objects/mmdb3/Biostruc_feature_.hpp>
Inheritance diagram for CBiostruc_feature_Base::C_Location:
Collaboration diagram for CBiostruc_feature_Base::C_Location:
Public Types | |
| enum | E_Choice { e_not_set = 0 , e_Subgraph , e_Region , e_Alignment , e_Interaction , e_Similarity , e_Indirect } |
| Choice variants. More... | |
| enum | E_ChoiceStopper { e_MaxChoice = 7 } |
| Maximum+1 value of the choice variant enumerator. More... | |
| typedef CChem_graph_pntrs | TSubgraph |
| typedef CRegion_pntrs | TRegion |
| typedef CChem_graph_alignment | TAlignment |
| typedef CChem_graph_interaction | TInteraction |
| typedef CRegion_similarity | TSimilarity |
| typedef COther_feature | TIndirect |
| Public Types inherited from CObject | |
| enum | EAllocFillMode { eAllocFillNone = 1 , eAllocFillZero , eAllocFillPattern } |
| Control filling of newly allocated memory. More... | |
| typedef CObjectCounterLocker | TLockerType |
| Default locker type for CRef. More... | |
| typedef atomic< Uint8 > | TCounter |
| Counter type is CAtomiCounter. More... | |
| typedef Uint8 | TCount |
| Alias for value type of counter. More... | |
Public Member Functions | |
| C_Location (void) | |
| ~C_Location (void) | |
| DECLARE_INTERNAL_TYPE_INFO () | |
| void | Reset (void) |
| Reset the whole object. More... | |
| void | ResetSelection (void) |
| Reset the selection (set it to e_not_set). More... | |
| E_Choice | Which (void) const |
| Which variant is currently selected. More... | |
| void | CheckSelected (E_Choice index) const |
| Verify selection, throw exception if it differs from the expected. More... | |
| void | ThrowInvalidSelection (E_Choice index) const |
| Throw 'InvalidSelection' exception. More... | |
| void | Select (E_Choice index, EResetVariant reset=eDoResetVariant) |
| Select the requested variant if needed. More... | |
| void | Select (E_Choice index, EResetVariant reset, CObjectMemoryPool *pool) |
| Select the requested variant if needed, allocating CObject variants from memory pool. More... | |
| bool | IsSubgraph (void) const |
| Check if variant Subgraph is selected. More... | |
| const TSubgraph & | GetSubgraph (void) const |
| Get the variant data. More... | |
| TSubgraph & | SetSubgraph (void) |
| Select the variant. More... | |
| void | SetSubgraph (TSubgraph &value) |
| Select the variant and set its data. More... | |
| bool | IsRegion (void) const |
| Check if variant Region is selected. More... | |
| const TRegion & | GetRegion (void) const |
| Get the variant data. More... | |
| TRegion & | SetRegion (void) |
| Select the variant. More... | |
| void | SetRegion (TRegion &value) |
| Select the variant and set its data. More... | |
| bool | IsAlignment (void) const |
| Check if variant Alignment is selected. More... | |
| const TAlignment & | GetAlignment (void) const |
| Get the variant data. More... | |
| TAlignment & | SetAlignment (void) |
| Select the variant. More... | |
| void | SetAlignment (TAlignment &value) |
| Select the variant and set its data. More... | |
| bool | IsInteraction (void) const |
| Check if variant Interaction is selected. More... | |
| const TInteraction & | GetInteraction (void) const |
| Get the variant data. More... | |
| TInteraction & | SetInteraction (void) |
| Select the variant. More... | |
| void | SetInteraction (TInteraction &value) |
| Select the variant and set its data. More... | |
| bool | IsSimilarity (void) const |
| Check if variant Similarity is selected. More... | |
| const TSimilarity & | GetSimilarity (void) const |
| Get the variant data. More... | |
| TSimilarity & | SetSimilarity (void) |
| Select the variant. More... | |
| void | SetSimilarity (TSimilarity &value) |
| Select the variant and set its data. More... | |
| bool | IsIndirect (void) const |
| Check if variant Indirect is selected. More... | |
| const TIndirect & | GetIndirect (void) const |
| Get the variant data. More... | |
| TIndirect & | SetIndirect (void) |
| Select the variant. More... | |
| void | SetIndirect (TIndirect &value) |
| Select the variant and set its data. More... | |
| Public Member Functions inherited from CSerialObject | |
| CSerialObject (void) | |
| virtual | ~CSerialObject (void) |
| virtual const CTypeInfo * | GetThisTypeInfo (void) const =0 |
| virtual void | Assign (const CSerialObject &source, ESerialRecursionMode how=eRecursive) |
| Set object to copy of another one. More... | |
| virtual bool | Equals (const CSerialObject &object, ESerialRecursionMode how=eRecursive) const |
| Check if both objects contain the same values. More... | |
| virtual void | DebugDump (CDebugDumpContext ddc, unsigned int depth) const |
| Define method for dumping debug information. More... | |
| void | ThrowUnassigned (TMemberIndex index) const |
| void | ThrowUnassigned (TMemberIndex index, const char *file_name, int file_line) const |
| bool | HasNamespaceName (void) const |
| Check if object data type has namespace name. More... | |
| const string & | GetNamespaceName (void) const |
| Get namespace name. More... | |
| bool | HasNamespacePrefix (void) const |
| Check if data type has namespace prefix. More... | |
| const string & | GetNamespacePrefix (void) const |
| Get namespace prefix. More... | |
| Public Member Functions inherited from CObject | |
| CObject (void) | |
| Constructor. More... | |
| CObject (const CObject &src) | |
| Copy constructor. More... | |
| virtual | ~CObject (void) |
| Destructor. More... | |
| CObject & | operator= (const CObject &src) THROWS_NONE |
| Assignment operator. More... | |
| bool | CanBeDeleted (void) const THROWS_NONE |
| Check if object can be deleted. More... | |
| bool | IsAllocatedInPool (void) const THROWS_NONE |
| Check if object is allocated in memory pool (not system heap) More... | |
| bool | Referenced (void) const THROWS_NONE |
| Check if object is referenced. More... | |
| bool | ReferencedOnlyOnce (void) const THROWS_NONE |
| Check if object is referenced only once. More... | |
| void | AddReference (void) const |
| Add reference to object. More... | |
| void | RemoveReference (void) const |
| Remove reference to object. More... | |
| void | ReleaseReference (void) const |
| Remove reference without deleting object. More... | |
| virtual void | DoNotDeleteThisObject (void) |
| Mark this object as not allocated in heap – do not delete this object. More... | |
| virtual void | DoDeleteThisObject (void) |
| Mark this object as allocated in heap – object can be deleted. More... | |
| void * | operator new (size_t size) |
| Define new operator for memory allocation. More... | |
| void * | operator new[] (size_t size) |
| Define new[] operator for 'array' memory allocation. More... | |
| void | operator delete (void *ptr) |
| Define delete operator for memory deallocation. More... | |
| void | operator delete[] (void *ptr) |
| Define delete[] operator for memory deallocation. More... | |
| void * | operator new (size_t size, void *place) |
| Define new operator. More... | |
| void | operator delete (void *ptr, void *place) |
| Define delete operator. More... | |
| void * | operator new (size_t size, CObjectMemoryPool *place) |
| Define new operator using memory pool. More... | |
| void | operator delete (void *ptr, CObjectMemoryPool *place) |
| Define delete operator. More... | |
| Public Member Functions inherited from CDebugDumpable | |
| CDebugDumpable (void) | |
| virtual | ~CDebugDumpable (void) |
| void | DebugDumpText (ostream &out, const string &bundle, unsigned int depth) const |
| void | DebugDumpFormat (CDebugDumpFormatter &ddf, const string &bundle, unsigned int depth) const |
| void | DumpToConsole (void) const |
Static Public Member Functions | |
| static string | SelectionName (E_Choice index) |
| Retrieve selection name (for diagnostic purposes). More... | |
| Static Public Member Functions inherited from CSerialObject | |
| static void | SetVerifyDataThread (ESerialVerifyData verify) |
| static void | SetVerifyDataGlobal (ESerialVerifyData verify) |
| static string | UnassignedString (void) |
| static CStringUTF8 | UnassignedStringUTF8 (void) |
| static char | UnassignedByte (void) |
| Static Public Member Functions inherited from CObject | |
| static NCBI_XNCBI_EXPORT void | ThrowNullPointerException (void) |
| Define method to throw null pointer exception. More... | |
| static NCBI_XNCBI_EXPORT void | ThrowNullPointerException (const type_info &type) |
| static EAllocFillMode | GetAllocFillMode (void) |
| static void | SetAllocFillMode (EAllocFillMode mode) |
| static void | SetAllocFillMode (const string &value) |
| Set mode from configuration parameter value. More... | |
| Static Public Member Functions inherited from CDebugDumpable | |
| static void | EnableDebugDump (bool on) |
Private Types | |
| typedef CSerialObject | Tparent |
Private Member Functions | |
| C_Location (const C_Location &) | |
| C_Location & | operator= (const C_Location &) |
| void | DoSelect (E_Choice index, CObjectMemoryPool *pool=0) |
Private Attributes | |
| E_Choice | m_choice |
| NCBI_NS_NCBI::CSerialObject * | m_object |
Static Private Attributes | |
| static const char *const | sm_SelectionNames [] |
Additional Inherited Members | |
| Static Public Attributes inherited from CSerialObject | |
| static const char * | ms_UnassignedStr = "<*unassigned*>" |
| static const char | ms_UnassignedByte = char(0xcd) |
| Static Public Attributes inherited from CObject | |
| static const TCount | eCounterBitsCanBeDeleted = 1 << 0 |
| Define possible object states. More... | |
| static const TCount | eCounterBitsInPlainHeap = 1 << 1 |
| Heap signature was found. More... | |
| static const TCount | eCounterBitsPlaceMask |
| Mask for 'in heap' state flags. More... | |
| static const int | eCounterStep = 1 << 2 |
| Skip over the "in heap" bits. More... | |
| static const TCount | eCounterValid = TCount(1) << (sizeof(TCount) * 8 - 2) |
| Minimal value for valid objects (reference counter is zero) Must be a single bit value. More... | |
| static const TCount | eCounterStateMask |
| Valid object, and object in heap. More... | |
| Protected Member Functions inherited from CObject | |
| virtual void | DeleteThis (void) |
| Virtual method "deleting" this object. More... | |
Detailed Description
C_Location –.
Definition at line 405 of file Biostruc_feature_.hpp.
The documentation for this class was generated from the following files:
- include/objects/mmdb3/Biostruc_feature_.hpp
- src/objects/mmdb3/Biostruc_feature_.cpp
