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Represents ASN.1 type Blast4-get-search-results-reply defined in file blast.asn

Search Toolkit Book for CBlast4_get_search_results_reply

CBlast4_get_search_results_reply –. More...

#include <objects/blast/Blas_get_searc_resul_reply.hpp>

+ Inheritance diagram for CBlast4_get_search_results_reply:
+ Collaboration diagram for CBlast4_get_search_results_reply:

Public Member Functions

 CBlast4_get_search_results_reply (void)
 
 ~CBlast4_get_search_results_reply (void)
 
- Public Member Functions inherited from CBlast4_get_search_results_reply_Base
 CBlast4_get_search_results_reply_Base (void)
 
virtual ~CBlast4_get_search_results_reply_Base (void)
 
 DECLARE_INTERNAL_TYPE_INFO ()
 
bool IsSetAlignments (void) const
 Check if a value has been assigned to Alignments data member. More...
 
bool CanGetAlignments (void) const
 Check if it is safe to call GetAlignments method. More...
 
void ResetAlignments (void)
 Reset Alignments data member. More...
 
const TAlignmentsGetAlignments (void) const
 Get the Alignments member data. More...
 
void SetAlignments (TAlignments &value)
 Assign a value to Alignments data member. More...
 
TAlignmentsSetAlignments (void)
 Assign a value to Alignments data member. More...
 
bool IsSetPhi_alignments (void) const
 Check if a value has been assigned to Phi_alignments data member. More...
 
bool CanGetPhi_alignments (void) const
 Check if it is safe to call GetPhi_alignments method. More...
 
void ResetPhi_alignments (void)
 Reset Phi_alignments data member. More...
 
const TPhi_alignmentsGetPhi_alignments (void) const
 Get the Phi_alignments member data. More...
 
void SetPhi_alignments (TPhi_alignments &value)
 Assign a value to Phi_alignments data member. More...
 
TPhi_alignmentsSetPhi_alignments (void)
 Assign a value to Phi_alignments data member. More...
 
bool IsSetMasks (void) const
 Masking locations for the query sequence(s). More...
 
bool CanGetMasks (void) const
 Check if it is safe to call GetMasks method. More...
 
void ResetMasks (void)
 Reset Masks data member. More...
 
const TMasksGetMasks (void) const
 Get the Masks member data. More...
 
TMasksSetMasks (void)
 Assign a value to Masks data member. More...
 
bool IsSetKa_blocks (void) const
 Check if a value has been assigned to Ka_blocks data member. More...
 
bool CanGetKa_blocks (void) const
 Check if it is safe to call GetKa_blocks method. More...
 
void ResetKa_blocks (void)
 Reset Ka_blocks data member. More...
 
const TKa_blocksGetKa_blocks (void) const
 Get the Ka_blocks member data. More...
 
TKa_blocksSetKa_blocks (void)
 Assign a value to Ka_blocks data member. More...
 
bool IsSetSearch_stats (void) const
 Check if a value has been assigned to Search_stats data member. More...
 
bool CanGetSearch_stats (void) const
 Check if it is safe to call GetSearch_stats method. More...
 
void ResetSearch_stats (void)
 Reset Search_stats data member. More...
 
const TSearch_statsGetSearch_stats (void) const
 Get the Search_stats member data. More...
 
TSearch_statsSetSearch_stats (void)
 Assign a value to Search_stats data member. More...
 
bool IsSetPssm (void) const
 Check if a value has been assigned to Pssm data member. More...
 
bool CanGetPssm (void) const
 Check if it is safe to call GetPssm method. More...
 
void ResetPssm (void)
 Reset Pssm data member. More...
 
const TPssmGetPssm (void) const
 Get the Pssm member data. More...
 
void SetPssm (TPssm &value)
 Assign a value to Pssm data member. More...
 
TPssmSetPssm (void)
 Assign a value to Pssm data member. More...
 
bool IsSetSimple_results (void) const
 Check if a value has been assigned to Simple_results data member. More...
 
bool CanGetSimple_results (void) const
 Check if it is safe to call GetSimple_results method. More...
 
void ResetSimple_results (void)
 Reset Simple_results data member. More...
 
const TSimple_resultsGetSimple_results (void) const
 Get the Simple_results member data. More...
 
void SetSimple_results (TSimple_results &value)
 Assign a value to Simple_results data member. More...
 
TSimple_resultsSetSimple_results (void)
 Assign a value to Simple_results data member. More...
 
virtual void Reset (void)
 Reset the whole object. More...
 
- Public Member Functions inherited from CSerialObject
 CSerialObject (void)
 
virtual ~CSerialObject (void)
 
virtual const CTypeInfoGetThisTypeInfo (void) const =0
 
virtual void Assign (const CSerialObject &source, ESerialRecursionMode how=eRecursive)
 Set object to copy of another one. More...
 
virtual bool Equals (const CSerialObject &object, ESerialRecursionMode how=eRecursive) const
 Check if both objects contain the same values. More...
 
virtual void DebugDump (CDebugDumpContext ddc, unsigned int depth) const
 Define method for dumping debug information. More...
 
void ThrowUnassigned (TMemberIndex index) const
 
void ThrowUnassigned (TMemberIndex index, const char *file_name, int file_line) const
 
bool HasNamespaceName (void) const
 Check if object data type has namespace name. More...
 
const stringGetNamespaceName (void) const
 Get namespace name. More...
 
bool HasNamespacePrefix (void) const
 Check if data type has namespace prefix. More...
 
const stringGetNamespacePrefix (void) const
 Get namespace prefix. More...
 
- Public Member Functions inherited from CObject
 CObject (void)
 Constructor. More...
 
 CObject (const CObject &src)
 Copy constructor. More...
 
virtual ~CObject (void)
 Destructor. More...
 
CObjectoperator= (const CObject &src) THROWS_NONE
 Assignment operator. More...
 
bool CanBeDeleted (void) const THROWS_NONE
 Check if object can be deleted. More...
 
bool IsAllocatedInPool (void) const THROWS_NONE
 Check if object is allocated in memory pool (not system heap) More...
 
bool Referenced (void) const THROWS_NONE
 Check if object is referenced. More...
 
bool ReferencedOnlyOnce (void) const THROWS_NONE
 Check if object is referenced only once. More...
 
void AddReference (void) const
 Add reference to object. More...
 
void RemoveReference (void) const
 Remove reference to object. More...
 
void ReleaseReference (void) const
 Remove reference without deleting object. More...
 
virtual void DoNotDeleteThisObject (void)
 Mark this object as not allocated in heap – do not delete this object. More...
 
virtual void DoDeleteThisObject (void)
 Mark this object as allocated in heap – object can be deleted. More...
 
void * operator new (size_t size)
 Define new operator for memory allocation. More...
 
void * operator new[] (size_t size)
 Define new[] operator for 'array' memory allocation. More...
 
void operator delete (void *ptr)
 Define delete operator for memory deallocation. More...
 
void operator delete[] (void *ptr)
 Define delete[] operator for memory deallocation. More...
 
void * operator new (size_t size, void *place)
 Define new operator. More...
 
void operator delete (void *ptr, void *place)
 Define delete operator. More...
 
void * operator new (size_t size, CObjectMemoryPool *place)
 Define new operator using memory pool. More...
 
void operator delete (void *ptr, CObjectMemoryPool *place)
 Define delete operator. More...
 
- Public Member Functions inherited from CDebugDumpable
 CDebugDumpable (void)
 
virtual ~CDebugDumpable (void)
 
void DebugDumpText (ostream &out, const string &bundle, unsigned int depth) const
 
void DebugDumpFormat (CDebugDumpFormatter &ddf, const string &bundle, unsigned int depth) const
 
void DumpToConsole (void) const
 

Private Types

typedef CBlast4_get_search_results_reply_Base Tparent
 

Private Member Functions

 CBlast4_get_search_results_reply (const CBlast4_get_search_results_reply &value)
 
CBlast4_get_search_results_replyoperator= (const CBlast4_get_search_results_reply &value)
 

Additional Inherited Members

- Public Types inherited from CBlast4_get_search_results_reply_Base
enum class  E_memberIndex {
  e__allMandatory = 0 , e_alignments , e_phi_alignments , e_masks ,
  e_ka_blocks , e_search_stats , e_pssm , e_simple_results
}
 
typedef CSeq_align_set TAlignments
 
typedef CBlast4_phi_alignments TPhi_alignments
 
typedef list< CRef< CBlast4_mask > > TMasks
 
typedef list< CRef< CBlast4_ka_block > > TKa_blocks
 
typedef list< stringTSearch_stats
 
typedef CPssmWithParameters TPssm
 
typedef CBlast4_simple_results TSimple_results
 
typedef Tparent::CMemberIndex< E_memberIndex, 8 > TmemberIndex
 
- Public Types inherited from CObject
enum  EAllocFillMode { eAllocFillNone = 1 , eAllocFillZero , eAllocFillPattern }
 Control filling of newly allocated memory. More...
 
typedef CObjectCounterLocker TLockerType
 Default locker type for CRef. More...
 
typedef atomic< Uint8TCounter
 Counter type is CAtomiCounter. More...
 
typedef Uint8 TCount
 Alias for value type of counter. More...
 
- Static Public Member Functions inherited from CSerialObject
static void SetVerifyDataThread (ESerialVerifyData verify)
 
static void SetVerifyDataGlobal (ESerialVerifyData verify)
 
static string UnassignedString (void)
 
static CStringUTF8 UnassignedStringUTF8 (void)
 
static char UnassignedByte (void)
 
- Static Public Member Functions inherited from CObject
static NCBI_XNCBI_EXPORT void ThrowNullPointerException (void)
 Define method to throw null pointer exception. More...
 
static NCBI_XNCBI_EXPORT void ThrowNullPointerException (const type_info &type)
 
static EAllocFillMode GetAllocFillMode (void)
 
static void SetAllocFillMode (EAllocFillMode mode)
 
static void SetAllocFillMode (const string &value)
 Set mode from configuration parameter value. More...
 
- Static Public Member Functions inherited from CDebugDumpable
static void EnableDebugDump (bool on)
 
- Static Public Attributes inherited from CSerialObject
static const char * ms_UnassignedStr = "<*unassigned*>"
 
static const char ms_UnassignedByte = char(0xcd)
 
- Static Public Attributes inherited from CObject
static const TCount eCounterBitsCanBeDeleted = 1 << 0
 Define possible object states. More...
 
static const TCount eCounterBitsInPlainHeap = 1 << 1
 Heap signature was found. More...
 
static const TCount eCounterBitsPlaceMask
 Mask for 'in heap' state flags. More...
 
static const int eCounterStep = 1 << 2
 Skip over the "in heap" bits. More...
 
static const TCount eCounterValid = TCount(1) << (sizeof(TCount) * 8 - 2)
 Minimal value for valid objects (reference counter is zero) Must be a single bit value. More...
 
static const TCount eCounterStateMask
 Valid object, and object in heap. More...
 
- Protected Member Functions inherited from CObject
virtual void DeleteThis (void)
 Virtual method "deleting" this object. More...
 

Detailed Description

CBlast4_get_search_results_reply –.

Definition at line 65 of file Blas_get_searc_resul_reply.hpp.


The documentation for this class was generated from the following files:
Modified on Sat Jun 22 10:43:01 2024 by modify_doxy.py rev. 669887