NCBI C++ ToolKit
Public Member Functions | Private Types | Private Member Functions | List of all members

Represents ASN.1 type Clone-seq defined in file seqfeat.asn

Search Toolkit Book for CClone_seq

CClone_seq –. More...

#include <objects/seqfeat/Clone_seq.hpp>

+ Inheritance diagram for CClone_seq:
+ Collaboration diagram for CClone_seq:

Public Member Functions

 CClone_seq (void)
 
 ~CClone_seq (void)
 
- Public Member Functions inherited from CClone_seq_Base
 CClone_seq_Base (void)
 
virtual ~CClone_seq_Base (void)
 
 DECLARE_INTERNAL_TYPE_INFO ()
 
bool IsSetType (void) const
 Check if a value has been assigned to Type data member. More...
 
bool CanGetType (void) const
 Check if it is safe to call GetType method. More...
 
void ResetType (void)
 Reset Type data member. More...
 
TType GetType (void) const
 Get the Type member data. More...
 
void SetType (TType value)
 Assign a value to Type data member. More...
 
TTypeSetType (void)
 Assign a value to Type data member. More...
 
bool IsSetConfidence (void) const
 Check if a value has been assigned to Confidence data member. More...
 
bool CanGetConfidence (void) const
 Check if it is safe to call GetConfidence method. More...
 
void ResetConfidence (void)
 Reset Confidence data member. More...
 
TConfidence GetConfidence (void) const
 Get the Confidence member data. More...
 
void SetConfidence (TConfidence value)
 Assign a value to Confidence data member. More...
 
TConfidenceSetConfidence (void)
 Assign a value to Confidence data member. More...
 
bool IsSetLocation (void) const
 location on sequence Check if a value has been assigned to Location data member. More...
 
bool CanGetLocation (void) const
 Check if it is safe to call GetLocation method. More...
 
void ResetLocation (void)
 Reset Location data member. More...
 
const TLocationGetLocation (void) const
 Get the Location member data. More...
 
void SetLocation (TLocation &value)
 Assign a value to Location data member. More...
 
TLocationSetLocation (void)
 Assign a value to Location data member. More...
 
bool IsSetSeq (void) const
 clone sequence location Check if a value has been assigned to Seq data member. More...
 
bool CanGetSeq (void) const
 Check if it is safe to call GetSeq method. More...
 
void ResetSeq (void)
 Reset Seq data member. More...
 
const TSeqGetSeq (void) const
 Get the Seq member data. More...
 
void SetSeq (TSeq &value)
 Assign a value to Seq data member. More...
 
TSeqSetSeq (void)
 Assign a value to Seq data member. More...
 
bool IsSetAlign_id (void) const
 internal alignment identifier Check if a value has been assigned to Align_id data member. More...
 
bool CanGetAlign_id (void) const
 Check if it is safe to call GetAlign_id method. More...
 
void ResetAlign_id (void)
 Reset Align_id data member. More...
 
const TAlign_idGetAlign_id (void) const
 Get the Align_id member data. More...
 
void SetAlign_id (TAlign_id &value)
 Assign a value to Align_id data member. More...
 
TAlign_idSetAlign_id (void)
 Assign a value to Align_id data member. More...
 
bool IsSetSupport (void) const
 Check if a value has been assigned to Support data member. More...
 
bool CanGetSupport (void) const
 Check if it is safe to call GetSupport method. More...
 
void ResetSupport (void)
 Reset Support data member. More...
 
TSupport GetSupport (void) const
 Get the Support member data. More...
 
void SetSupport (TSupport value)
 Assign a value to Support data member. More...
 
TSupportSetSupport (void)
 Assign a value to Support data member. More...
 
virtual void Reset (void)
 Reset the whole object. More...
 
- Public Member Functions inherited from CSerialObject
 CSerialObject (void)
 
virtual ~CSerialObject (void)
 
virtual const CTypeInfoGetThisTypeInfo (void) const =0
 
virtual void Assign (const CSerialObject &source, ESerialRecursionMode how=eRecursive)
 Set object to copy of another one. More...
 
virtual bool Equals (const CSerialObject &object, ESerialRecursionMode how=eRecursive) const
 Check if both objects contain the same values. More...
 
virtual void DebugDump (CDebugDumpContext ddc, unsigned int depth) const
 Define method for dumping debug information. More...
 
void ThrowUnassigned (TMemberIndex index) const
 
void ThrowUnassigned (TMemberIndex index, const char *file_name, int file_line) const
 
bool HasNamespaceName (void) const
 Check if object data type has namespace name. More...
 
const stringGetNamespaceName (void) const
 Get namespace name. More...
 
bool HasNamespacePrefix (void) const
 Check if data type has namespace prefix. More...
 
const stringGetNamespacePrefix (void) const
 Get namespace prefix. More...
 
- Public Member Functions inherited from CObject
 CObject (void)
 Constructor. More...
 
 CObject (const CObject &src)
 Copy constructor. More...
 
virtual ~CObject (void)
 Destructor. More...
 
CObjectoperator= (const CObject &src) THROWS_NONE
 Assignment operator. More...
 
bool CanBeDeleted (void) const THROWS_NONE
 Check if object can be deleted. More...
 
bool IsAllocatedInPool (void) const THROWS_NONE
 Check if object is allocated in memory pool (not system heap) More...
 
bool Referenced (void) const THROWS_NONE
 Check if object is referenced. More...
 
bool ReferencedOnlyOnce (void) const THROWS_NONE
 Check if object is referenced only once. More...
 
void AddReference (void) const
 Add reference to object. More...
 
void RemoveReference (void) const
 Remove reference to object. More...
 
void ReleaseReference (void) const
 Remove reference without deleting object. More...
 
virtual void DoNotDeleteThisObject (void)
 Mark this object as not allocated in heap – do not delete this object. More...
 
virtual void DoDeleteThisObject (void)
 Mark this object as allocated in heap – object can be deleted. More...
 
void * operator new (size_t size)
 Define new operator for memory allocation. More...
 
void * operator new[] (size_t size)
 Define new[] operator for 'array' memory allocation. More...
 
void operator delete (void *ptr)
 Define delete operator for memory deallocation. More...
 
void operator delete[] (void *ptr)
 Define delete[] operator for memory deallocation. More...
 
void * operator new (size_t size, void *place)
 Define new operator. More...
 
void operator delete (void *ptr, void *place)
 Define delete operator. More...
 
void * operator new (size_t size, CObjectMemoryPool *place)
 Define new operator using memory pool. More...
 
void operator delete (void *ptr, CObjectMemoryPool *place)
 Define delete operator. More...
 
- Public Member Functions inherited from CDebugDumpable
 CDebugDumpable (void)
 
virtual ~CDebugDumpable (void)
 
void DebugDumpText (ostream &out, const string &bundle, unsigned int depth) const
 
void DebugDumpFormat (CDebugDumpFormatter &ddf, const string &bundle, unsigned int depth) const
 
void DumpToConsole (void) const
 

Private Types

typedef CClone_seq_Base Tparent
 

Private Member Functions

 CClone_seq (const CClone_seq &value)
 
CClone_seqoperator= (const CClone_seq &value)
 

Additional Inherited Members

- Public Types inherited from CClone_seq_Base
enum  EType { eType_insert = 0 , eType_end = 1 , eType_other = 255 }
 
enum  EConfidence {
  eConfidence_multiple = 0 , eConfidence_na = 1 , eConfidence_nohit_rep = 2 , eConfidence_nohitnorep = 3 ,
  eConfidence_other_chrm = 4 , eConfidence_unique = 5 , eConfidence_virtual = 6 , eConfidence_multiple_rep = 7 ,
  eConfidence_multiplenorep = 8 , eConfidence_no_hit = 9 , eConfidence_other = 255
}
 
enum  ESupport { eSupport_prototype = 0 , eSupport_supporting = 1 , eSupport_supports_other = 2 , eSupport_non_supporting = 3 }
 
enum class  E_memberIndex {
  e__allMandatory = 0 , e_type , e_confidence , e_location ,
  e_seq , e_align_id , e_support
}
 
typedef int TType
 
typedef int TConfidence
 
typedef CSeq_loc TLocation
 
typedef CSeq_loc TSeq
 
typedef CDbtag TAlign_id
 
typedef int TSupport
 
typedef Tparent::CMemberIndex< E_memberIndex, 7 > TmemberIndex
 
- Public Types inherited from CObject
enum  EAllocFillMode { eAllocFillNone = 1 , eAllocFillZero , eAllocFillPattern }
 Control filling of newly allocated memory. More...
 
typedef CObjectCounterLocker TLockerType
 Default locker type for CRef. More...
 
typedef atomic< Uint8TCounter
 Counter type is CAtomiCounter. More...
 
typedef Uint8 TCount
 Alias for value type of counter. More...
 
- Static Public Member Functions inherited from CClone_seq_Base
static const NCBI_NS_NCBI::CEnumeratedTypeValues *ENUM_METHOD_NAME() EType (void)
 Access to EType's attributes (values, names) as defined in spec. More...
 
static const NCBI_NS_NCBI::CEnumeratedTypeValues *ENUM_METHOD_NAME() EConfidence (void)
 Access to EConfidence's attributes (values, names) as defined in spec. More...
 
static const NCBI_NS_NCBI::CEnumeratedTypeValues *ENUM_METHOD_NAME() ESupport (void)
 Access to ESupport's attributes (values, names) as defined in spec. More...
 
- Static Public Member Functions inherited from CSerialObject
static void SetVerifyDataThread (ESerialVerifyData verify)
 
static void SetVerifyDataGlobal (ESerialVerifyData verify)
 
static string UnassignedString (void)
 
static CStringUTF8 UnassignedStringUTF8 (void)
 
static char UnassignedByte (void)
 
- Static Public Member Functions inherited from CObject
static NCBI_XNCBI_EXPORT void ThrowNullPointerException (void)
 Define method to throw null pointer exception. More...
 
static NCBI_XNCBI_EXPORT void ThrowNullPointerException (const type_info &type)
 
static EAllocFillMode GetAllocFillMode (void)
 
static void SetAllocFillMode (EAllocFillMode mode)
 
static void SetAllocFillMode (const string &value)
 Set mode from configuration parameter value. More...
 
- Static Public Member Functions inherited from CDebugDumpable
static void EnableDebugDump (bool on)
 
- Static Public Attributes inherited from CSerialObject
static const char * ms_UnassignedStr = "<*unassigned*>"
 
static const char ms_UnassignedByte = char(0xcd)
 
- Static Public Attributes inherited from CObject
static const TCount eCounterBitsCanBeDeleted = 1 << 0
 Define possible object states. More...
 
static const TCount eCounterBitsInPlainHeap = 1 << 1
 Heap signature was found. More...
 
static const TCount eCounterBitsPlaceMask
 Mask for 'in heap' state flags. More...
 
static const int eCounterStep = 1 << 2
 Skip over the "in heap" bits. More...
 
static const TCount eCounterValid = TCount(1) << (sizeof(TCount) * 8 - 2)
 Minimal value for valid objects (reference counter is zero) Must be a single bit value. More...
 
static const TCount eCounterStateMask
 Valid object, and object in heap. More...
 
- Protected Member Functions inherited from CObject
virtual void DeleteThis (void)
 Virtual method "deleting" this object. More...
 

Detailed Description

CClone_seq –.

Definition at line 65 of file Clone_seq.hpp.


The documentation for this class was generated from the following files:
Modified on Tue Feb 27 05:50:28 2024 by modify_doxy.py rev. 669887