Search Toolkit Book for CCmdInsertBioseqSet
#include <gui/objutils/cmd_insert_bioseq_set.hpp>
Inheritance diagram for CCmdInsertBioseqSet:
Collaboration diagram for CCmdInsertBioseqSet:
Public Member Functions | |
| CCmdInsertBioseqSet (objects::CSeq_entry_Handle seh, const objects::CBioseq_set::TClass new_class) | |
IEditCommand interface implementation | |
| virtual void | Execute () |
| Do the editing action. More... | |
| virtual void | Unexecute () |
| Undo (opposite to Execute()) More... | |
| virtual string | GetLabel () |
| Public Member Functions inherited from CObject | |
| CObject (void) | |
| Constructor. More... | |
| CObject (const CObject &src) | |
| Copy constructor. More... | |
| virtual | ~CObject (void) |
| Destructor. More... | |
| CObject & | operator= (const CObject &src) THROWS_NONE |
| Assignment operator. More... | |
| bool | CanBeDeleted (void) const THROWS_NONE |
| Check if object can be deleted. More... | |
| bool | IsAllocatedInPool (void) const THROWS_NONE |
| Check if object is allocated in memory pool (not system heap) More... | |
| bool | Referenced (void) const THROWS_NONE |
| Check if object is referenced. More... | |
| bool | ReferencedOnlyOnce (void) const THROWS_NONE |
| Check if object is referenced only once. More... | |
| void | AddReference (void) const |
| Add reference to object. More... | |
| void | RemoveReference (void) const |
| Remove reference to object. More... | |
| void | ReleaseReference (void) const |
| Remove reference without deleting object. More... | |
| virtual void | DoNotDeleteThisObject (void) |
| Mark this object as not allocated in heap – do not delete this object. More... | |
| virtual void | DoDeleteThisObject (void) |
| Mark this object as allocated in heap – object can be deleted. More... | |
| void * | operator new (size_t size) |
| Define new operator for memory allocation. More... | |
| void * | operator new[] (size_t size) |
| Define new[] operator for 'array' memory allocation. More... | |
| void | operator delete (void *ptr) |
| Define delete operator for memory deallocation. More... | |
| void | operator delete[] (void *ptr) |
| Define delete[] operator for memory deallocation. More... | |
| void * | operator new (size_t size, void *place) |
| Define new operator. More... | |
| void | operator delete (void *ptr, void *place) |
| Define delete operator. More... | |
| void * | operator new (size_t size, CObjectMemoryPool *place) |
| Define new operator using memory pool. More... | |
| void | operator delete (void *ptr, CObjectMemoryPool *place) |
| Define delete operator. More... | |
| virtual void | DebugDump (CDebugDumpContext ddc, unsigned int depth) const |
| Define method for dumping debug information. More... | |
| Public Member Functions inherited from CDebugDumpable | |
| CDebugDumpable (void) | |
| virtual | ~CDebugDumpable (void) |
| void | DebugDumpText (ostream &out, const string &bundle, unsigned int depth) const |
| void | DebugDumpFormat (CDebugDumpFormatter &ddf, const string &bundle, unsigned int depth) const |
| void | DumpToConsole (void) const |
| Public Member Functions inherited from IEditCommand | |
| virtual | ~IEditCommand () |
| virtual bool | CanMerge (IEditCommand *) |
| virtual void | Merge (IEditCommand *) |
| virtual | ~IEditCommand () |
| virtual void | Do (IScopeTransaction_Impl &)=0 |
| virtual void | Undo ()=0 |
Protected Member Functions | |
| void | x_TransferSeqSet (objects::CSeq_entry_EditHandle dst, objects::CSeq_entry_EditHandle src, size_t num_in_set) |
| Protected Member Functions inherited from CObject | |
| virtual void | DeleteThis (void) |
| Virtual method "deleting" this object. More... | |
Protected Attributes | |
| objects::CSeq_entry_Handle | m_seh |
| objects::CBioseq_set::TClass | m_Class |
Additional Inherited Members | |
| Public Types inherited from CObject | |
| enum | EAllocFillMode { eAllocFillNone = 1 , eAllocFillZero , eAllocFillPattern } |
| Control filling of newly allocated memory. More... | |
| typedef CObjectCounterLocker | TLockerType |
| Default locker type for CRef. More... | |
| typedef atomic< Uint8 > | TCounter |
| Counter type is CAtomiCounter. More... | |
| typedef Uint8 | TCount |
| Alias for value type of counter. More... | |
| Static Public Member Functions inherited from CObject | |
| static NCBI_XNCBI_EXPORT void | ThrowNullPointerException (void) |
| Define method to throw null pointer exception. More... | |
| static NCBI_XNCBI_EXPORT void | ThrowNullPointerException (const type_info &type) |
| static EAllocFillMode | GetAllocFillMode (void) |
| static void | SetAllocFillMode (EAllocFillMode mode) |
| static void | SetAllocFillMode (const string &value) |
| Set mode from configuration parameter value. More... | |
| Static Public Member Functions inherited from CDebugDumpable | |
| static void | EnableDebugDump (bool on) |
| Static Public Attributes inherited from CObject | |
| static const TCount | eCounterBitsCanBeDeleted = 1 << 0 |
| Define possible object states. More... | |
| static const TCount | eCounterBitsInPlainHeap = 1 << 1 |
| Heap signature was found. More... | |
| static const TCount | eCounterBitsPlaceMask |
| Mask for 'in heap' state flags. More... | |
| static const int | eCounterStep = 1 << 2 |
| Skip over the "in heap" bits. More... | |
| static const TCount | eCounterValid = TCount(1) << (sizeof(TCount) * 8 - 2) |
| Minimal value for valid objects (reference counter is zero) Must be a single bit value. More... | |
| static const TCount | eCounterStateMask |
| Valid object, and object in heap. More... | |
Detailed Description
Definition at line 44 of file cmd_insert_bioseq_set.hpp.
Constructor & Destructor Documentation
◆ CCmdInsertBioseqSet()
| CCmdInsertBioseqSet::CCmdInsertBioseqSet | ( | objects::CSeq_entry_Handle | seh, |
| const objects::CBioseq_set::TClass | new_class | ||
| ) |
Definition at line 41 of file cmd_insert_bioseq_set.cpp.
Member Function Documentation
◆ Execute()
|
virtual |
Do the editing action.
Implements IEditCommand.
Definition at line 46 of file cmd_insert_bioseq_set.cpp.
References CBioseq_set_Base::GetSeq_set(), m_Class, m_seh, CBioseq_set_Base::SetClass(), CSeq_entry_Base::SetSet(), CSeq_entry_EditHandle::TakeAllAnnots(), CSeq_entry_EditHandle::TakeAllDescr(), and x_TransferSeqSet().
◆ GetLabel()
|
virtual |
Implements IEditCommand.
Definition at line 89 of file cmd_insert_bioseq_set.cpp.
◆ Unexecute()
|
virtual |
Undo (opposite to Execute())
Implements IEditCommand.
Definition at line 68 of file cmd_insert_bioseq_set.cpp.
References CSeq_entry_Handle::GetEditHandle(), CBioseq_set_Base::GetSeq_set(), CSeq_entry_Base::GetSet(), CSeq_entry_Base::IsSet(), CBioseq_set_Base::IsSetSeq_set(), m_seh, CSeq_entry_EditHandle::Remove(), and x_TransferSeqSet().
◆ x_TransferSeqSet()
|
protected |
Definition at line 95 of file cmd_insert_bioseq_set.cpp.
References CBioseq_set_Handle::GetCompleteBioseq_set(), CSeq_entry_Handle::GetEditHandle(), CSeq_entry_Handle::GetScope(), CScope::GetSeq_entryHandle(), CBioseq_set_Base::GetSeq_set(), CSeq_entry_Handle::GetSet(), i, and CSeq_entry_EditHandle::TakeEntry().
Referenced by Execute(), and Unexecute().
Member Data Documentation
◆ m_Class
|
protected |
Definition at line 59 of file cmd_insert_bioseq_set.hpp.
Referenced by Execute().
◆ m_seh
|
protected |
Definition at line 58 of file cmd_insert_bioseq_set.hpp.
Referenced by Execute(), and Unexecute().
The documentation for this class was generated from the following files:
- include/gui/objutils/cmd_insert_bioseq_set.hpp
- src/gui/objutils/cmd_insert_bioseq_set.cpp
