AddReference(void) const | CObject | inline |
Assign(const CSerialObject &source, ESerialRecursionMode how=eRecursive) | CSerialObject | virtual |
CanBeDeleted(void) const THROWS_NONE | CObject | inline |
CanGetDb(void) const | CDbtag_Base | inline |
CanGetTag(void) const | CDbtag_Base | inline |
CDbtag(void) | CDbtag | inline |
CDbtag(const CDbtag &) | CDbtag | private |
CDbtag_Base(void) | CDbtag_Base | |
CDbtag_Base(const CDbtag_Base &) | CDbtag_Base | private |
CDebugDumpable(void) | CDebugDumpable | inline |
CheckReferenceOverflow(TCount count) const | CObject | private |
CObject(void) | CObject | |
CObject(const CObject &src) | CObject | |
Compare(const CDbtag &dbt2) const | CDbtag | |
CSerialObject(void) | CSerialObject | |
DebugDump(CDebugDumpContext ddc, unsigned int depth) const | CSerialObject | virtual |
DebugDumpFormat(CDebugDumpFormatter &ddf, const string &bundle, unsigned int depth) const | CDebugDumpable | |
DebugDumpText(ostream &out, const string &bundle, unsigned int depth) const | CDebugDumpable | |
DECLARE_INTERNAL_TYPE_INFO() | CDbtag_Base | |
DeleteThis(void) | CObject | protectedvirtual |
DoDeleteThisObject(void) | CObject | virtual |
DoNotDeleteThisObject(void) | CObject | virtual |
DumpToConsole(void) const | CDebugDumpable | |
E_memberIndex enum name | CDbtag_Base | |
EAllocFillMode enum name | CObject | |
eAllocFillNone enum value | CObject | |
eAllocFillPattern enum value | CObject | |
eAllocFillZero enum value | CObject | |
eCounterBitsCanBeDeleted | CObject | static |
eCounterBitsInPlainHeap | CObject | static |
eCounterBitsPlaceMask | CObject | static |
eCounterStateMask | CObject | static |
eCounterStep | CObject | static |
eCounterValid | CObject | static |
EDbtagGroup enum name | CDbtag | |
EDbtagType enum name | CDbtag | |
eDbtagType_AceView_WormGenes enum value | CDbtag | |
eDbtagType_AFTOL enum value | CDbtag | |
eDbtagType_AllianceGenome enum value | CDbtag | |
eDbtagType_AntWeb enum value | CDbtag | |
eDbtagType_APHIDBASE enum value | CDbtag | |
eDbtagType_ApiDB enum value | CDbtag | |
eDbtagType_ApiDB_CryptoDB enum value | CDbtag | |
eDbtagType_ApiDB_PlasmoDB enum value | CDbtag | |
eDbtagType_ApiDB_ToxoDB enum value | CDbtag | |
eDbtagType_Araport enum value | CDbtag | |
eDbtagType_ASAP enum value | CDbtag | |
eDbtagType_Assembly enum value | CDbtag | |
eDbtagType_ATCC enum value | CDbtag | |
eDbtagType_ATCC_dna enum value | CDbtag | |
eDbtagType_ATCC_in_host enum value | CDbtag | |
eDbtagType_axeldb enum value | CDbtag | |
eDbtagType_bad enum value | CDbtag | |
eDbtagType_BB enum value | CDbtag | |
eDbtagType_BDGP_EST enum value | CDbtag | |
eDbtagType_BDGP_INS enum value | CDbtag | |
eDbtagType_BEEBASE enum value | CDbtag | |
eDbtagType_BEETLEBASE enum value | CDbtag | |
eDbtagType_BEI enum value | CDbtag | |
eDbtagType_BGD enum value | CDbtag | |
eDbtagType_BioProject enum value | CDbtag | |
eDbtagType_BioSample enum value | CDbtag | |
eDbtagType_BoLD enum value | CDbtag | |
eDbtagType_CCDS enum value | CDbtag | |
eDbtagType_CDD enum value | CDbtag | |
eDbtagType_CGD enum value | CDbtag | |
eDbtagType_CGNC enum value | CDbtag | |
eDbtagType_CK enum value | CDbtag | |
eDbtagType_CloneID enum value | CDbtag | |
eDbtagType_COG enum value | CDbtag | |
eDbtagType_CollecTF enum value | CDbtag | |
eDbtagType_dbClone enum value | CDbtag | |
eDbtagType_dbCloneLib enum value | CDbtag | |
eDbtagType_dbEST enum value | CDbtag | |
eDbtagType_dbProbe enum value | CDbtag | |
eDbtagType_dbSNP enum value | CDbtag | |
eDbtagType_dbSTS enum value | CDbtag | |
eDbtagType_dbVar enum value | CDbtag | |
eDbtagType_DDBJ enum value | CDbtag | |
eDbtagType_dictyBase enum value | CDbtag | |
eDbtagType_EchinoBase enum value | CDbtag | |
eDbtagType_ECOCYC enum value | CDbtag | |
eDbtagType_EcoGene enum value | CDbtag | |
eDbtagType_EMBL enum value | CDbtag | |
eDbtagType_Ensembl enum value | CDbtag | |
eDbtagType_ENSEMBL enum value | CDbtag | |
eDbtagType_EnsemblGenomes enum value | CDbtag | |
eDbtagType_EnsemblGenomes_Gn enum value | CDbtag | |
eDbtagType_EnsemblGenomes_Tr enum value | CDbtag | |
eDbtagType_EnsemblRapid enum value | CDbtag | |
eDbtagType_EPDnew enum value | CDbtag | |
eDbtagType_ERIC enum value | CDbtag | |
eDbtagType_ESTLIB enum value | CDbtag | |
eDbtagType_FANTOM_DB enum value | CDbtag | |
eDbtagType_FBOL enum value | CDbtag | |
eDbtagType_FLYBASE enum value | CDbtag | |
eDbtagType_Fungorum enum value | CDbtag | |
eDbtagType_GABI enum value | CDbtag | |
eDbtagType_GDB enum value | CDbtag | |
eDbtagType_GenBank enum value | CDbtag | |
eDbtagType_GeneDB enum value | CDbtag | |
eDbtagType_GeneID enum value | CDbtag | |
eDbtagType_GEO enum value | CDbtag | |
eDbtagType_GI enum value | CDbtag | |
eDbtagType_GO enum value | CDbtag | |
eDbtagType_GOA enum value | CDbtag | |
eDbtagType_GrainGenes enum value | CDbtag | |
eDbtagType_Greengenes enum value | CDbtag | |
eDbtagType_GRIN enum value | CDbtag | |
eDbtagType_H_InvDB enum value | CDbtag | |
eDbtagType_HGNC enum value | CDbtag | |
eDbtagType_HMP enum value | CDbtag | |
eDbtagType_HOMD enum value | CDbtag | |
eDbtagType_HPM enum value | CDbtag | |
eDbtagType_HPRD enum value | CDbtag | |
eDbtagType_HSSP enum value | CDbtag | |
eDbtagType_I5KNAL enum value | CDbtag | |
eDbtagType_IFO enum value | CDbtag | |
eDbtagType_IKMC enum value | CDbtag | |
eDbtagType_IMGT_GENEDB enum value | CDbtag | |
eDbtagType_IMGT_HLA enum value | CDbtag | |
eDbtagType_IMGT_LIGM enum value | CDbtag | |
eDbtagType_InterimID enum value | CDbtag | |
eDbtagType_Interpro enum value | CDbtag | |
eDbtagType_IntrepidBio enum value | CDbtag | |
eDbtagType_IRD enum value | CDbtag | |
eDbtagType_ISD enum value | CDbtag | |
eDbtagType_ISFinder enum value | CDbtag | |
eDbtagType_ISHAM_ITS enum value | CDbtag | |
eDbtagType_JCM enum value | CDbtag | |
eDbtagType_JGIDB enum value | CDbtag | |
eDbtagType_LocusID enum value | CDbtag | |
eDbtagType_LRG enum value | CDbtag | |
eDbtagType_MaizeGDB enum value | CDbtag | |
eDbtagType_MarpolBase enum value | CDbtag | |
eDbtagType_MedGen enum value | CDbtag | |
eDbtagType_MGD enum value | CDbtag | |
eDbtagType_MGI enum value | CDbtag | |
eDbtagType_MIM enum value | CDbtag | |
eDbtagType_miRBase enum value | CDbtag | |
eDbtagType_MycoBank enum value | CDbtag | |
eDbtagType_NASONIABASE enum value | CDbtag | |
eDbtagType_NextDB enum value | CDbtag | |
eDbtagType_niaEST enum value | CDbtag | |
eDbtagType_NMPDR enum value | CDbtag | |
eDbtagType_NRESTdb enum value | CDbtag | |
eDbtagType_OrthoMCL enum value | CDbtag | |
eDbtagType_Osa1 enum value | CDbtag | |
eDbtagType_Pathema enum value | CDbtag | |
eDbtagType_PBmice enum value | CDbtag | |
eDbtagType_PBR enum value | CDbtag | |
eDbtagType_PDB enum value | CDbtag | |
eDbtagType_PeptideAtlas enum value | CDbtag | |
eDbtagType_PFAM enum value | CDbtag | |
eDbtagType_PGN enum value | CDbtag | |
eDbtagType_Phytozome enum value | CDbtag | |
eDbtagType_PID enum value | CDbtag | |
eDbtagType_PIR enum value | CDbtag | |
eDbtagType_PomBase enum value | CDbtag | |
eDbtagType_PSEUDO enum value | CDbtag | |
eDbtagType_PseudoCap enum value | CDbtag | |
eDbtagType_PseudoCAP enum value | CDbtag | |
eDbtagType_PubChem enum value | CDbtag | |
eDbtagType_RAP_DB enum value | CDbtag | |
eDbtagType_RATMAP enum value | CDbtag | |
eDbtagType_RBGE_garden enum value | CDbtag | |
eDbtagType_RBGE_herbarium enum value | CDbtag | |
eDbtagType_REBASE enum value | CDbtag | |
eDbtagType_RefSeq enum value | CDbtag | |
eDbtagType_RFAM enum value | CDbtag | |
eDbtagType_RGD enum value | CDbtag | |
eDbtagType_RiceGenes enum value | CDbtag | |
eDbtagType_RNAcentral enum value | CDbtag | |
eDbtagType_RZPD enum value | CDbtag | |
eDbtagType_SEED enum value | CDbtag | |
eDbtagType_SGD enum value | CDbtag | |
eDbtagType_SGN enum value | CDbtag | |
eDbtagType_SK_FST enum value | CDbtag | |
eDbtagType_SoyBase enum value | CDbtag | |
eDbtagType_SRA enum value | CDbtag | |
eDbtagType_SRPDB enum value | CDbtag | |
eDbtagType_SubtiList enum value | CDbtag | |
eDbtagType_TAIR enum value | CDbtag | |
eDbtagType_taxon enum value | CDbtag | |
eDbtagType_TIGRFAM enum value | CDbtag | |
eDbtagType_Trace enum value | CDbtag | |
eDbtagType_TubercuList enum value | CDbtag | |
eDbtagType_UniGene enum value | CDbtag | |
eDbtagType_UNILIB enum value | CDbtag | |
eDbtagType_UniProt_SwissProt enum value | CDbtag | |
eDbtagType_UniProt_TrEMBL enum value | CDbtag | |
eDbtagType_UniSTS enum value | CDbtag | |
eDbtagType_UNITE enum value | CDbtag | |
eDbtagType_VBASE2 enum value | CDbtag | |
eDbtagType_VBRC enum value | CDbtag | |
eDbtagType_VectorBase enum value | CDbtag | |
eDbtagType_Vega enum value | CDbtag | |
eDbtagType_VGNC enum value | CDbtag | |
eDbtagType_ViPR enum value | CDbtag | |
eDbtagType_VISTA enum value | CDbtag | |
eDbtagType_WorfDB enum value | CDbtag | |
eDbtagType_WormBase enum value | CDbtag | |
eDbtagType_Xenbase enum value | CDbtag | |
eDbtagType_ZFIN enum value | CDbtag | |
EIsEstOrGss enum name | CDbtag | |
eIsEstOrGss_No enum value | CDbtag | |
eIsEstOrGss_Yes enum value | CDbtag | |
EIsRefseq enum name | CDbtag | |
eIsRefseq_No enum value | CDbtag | |
eIsRefseq_Yes enum value | CDbtag | |
EIsSource enum name | CDbtag | |
eIsSource_No enum value | CDbtag | |
eIsSource_Yes enum value | CDbtag | |
EnableDebugDump(bool on) | CDebugDumpable | static |
Equals(const CSerialObject &object, ESerialRecursionMode how=eRecursive) const | CSerialObject | virtual |
fGenBank enum value | CDbtag | |
fNone enum value | CDbtag | |
fProbe enum value | CDbtag | |
fRefSeq enum value | CDbtag | |
fSrc enum value | CDbtag | |
GetAllocFillMode(void) | CObject | static |
GetDb(void) const | CDbtag_Base | inline |
GetDBFlags(bool &is_refseq, bool &is_src, string &correct_caps) const | CDbtag | |
GetDBFlags(string &correct_caps) const | CDbtag | |
GetLabel(string *label) const | CDbtag | |
GetNamespaceName(void) const | CSerialObject | |
GetNamespacePrefix(void) const | CSerialObject | |
GetTag(void) const | CDbtag_Base | inline |
GetThisTypeInfo(void) const =0 | CSerialObject | pure virtual |
GetType(void) const | CDbtag | |
GetUrl(void) const | CDbtag | |
GetUrl(TTaxId taxid) const | CDbtag | |
GetUrl(const string &taxname) const | CDbtag | |
GetUrl(const string &genus, const string &species, const string &subspecies=kEmptyStr) const | CDbtag | |
HasNamespaceName(void) const | CSerialObject | |
HasNamespacePrefix(void) const | CSerialObject | |
InitCounter(void) | CObject | inlineprivate |
InvalidateType(void) | CDbtag | |
InvalidObject(void) const | CObject | private |
IsAllocatedInPool(void) const THROWS_NONE | CObject | inline |
IsApproved(EIsRefseq refseq=eIsRefseq_No, EIsSource is_source=eIsSource_No, EIsEstOrGss is_est_or_gss=eIsEstOrGss_No) const | CDbtag | |
IsApproved(TDbtagGroup group) const | CDbtag | |
IsApprovedNoCase(EIsRefseq refseq=eIsRefseq_No, EIsSource is_source=eIsSource_No) const | CDbtag | |
IsSetDb(void) const | CDbtag_Base | inline |
IsSetTag(void) const | CDbtag_Base | inline |
IsSkippable(void) const | CDbtag | |
m_Counter | CObject | mutableprivate |
m_Db | CDbtag_Base | private |
m_set_State | CDbtag_Base | private |
m_Tag | CDbtag_Base | private |
m_Type | CDbtag | mutableprivate |
Match(const CDbtag &dbt2) const | CDbtag | |
ms_UnassignedByte | CSerialObject | static |
ms_UnassignedStr | CSerialObject | static |
ObjectStateCanBeDeleted(TCount count) | CObject | inlineprivatestatic |
ObjectStateIsAllocatedInPool(TCount count) | CObject | inlineprivatestatic |
ObjectStateReferenced(TCount count) | CObject | inlineprivatestatic |
ObjectStateReferencedOnlyOnce(TCount count) | CObject | inlineprivatestatic |
ObjectStateUnreferenced(TCount count) | CObject | inlineprivatestatic |
ObjectStateValid(TCount count) | CObject | inlineprivatestatic |
operator delete(void *ptr) | CObject | |
operator delete(void *ptr, void *place) | CObject | |
operator delete(void *ptr, CObjectMemoryPool *place) | CObject | |
operator delete[](void *ptr) | CObject | |
operator new(size_t size) | CObject | |
operator new(size_t size, void *place) | CObject | |
operator new(size_t size, CObjectMemoryPool *place) | CObject | |
operator new[](size_t size) | CObject | |
operator=(const CDbtag &) | CDbtag | private |
CSerialObject::operator=(const CObject &src) THROWS_NONE | CObject | inline |
Referenced(void) const THROWS_NONE | CObject | inline |
ReferencedOnlyOnce(void) const THROWS_NONE | CObject | inline |
ReleaseReference(void) const | CObject | |
RemoveLastReference(TCount count) const | CObject | private |
RemoveReference(void) const | CObject | inline |
Reset(void) | CDbtag_Base | virtual |
ResetDb(void) | CDbtag_Base | |
ResetTag(void) | CDbtag_Base | |
SetAllocFillMode(EAllocFillMode mode) | CObject | static |
SetAllocFillMode(const string &value) | CObject | static |
SetAsMatchingTo(const CDbtag &dbt2) | CDbtag | |
SetDb(const TDb &value) | CDbtag_Base | inline |
SetDb(TDb &&value) | CDbtag_Base | inline |
SetDb(void) | CDbtag_Base | inline |
SetTag(TTag &value) | CDbtag_Base | |
SetTag(void) | CDbtag_Base | inline |
SetVerifyDataGlobal(ESerialVerifyData verify) | CSerialObject | static |
SetVerifyDataThread(ESerialVerifyData verify) | CSerialObject | static |
sm_DumpEnabled | CDebugDumpable | privatestatic |
TCount typedef | CObject | |
TCounter typedef | CObject | |
TDb typedef | CDbtag_Base | |
TDbtagGroup typedef | CDbtag | |
ThrowNullPointerException(void) | CObject | static |
ThrowNullPointerException(const type_info &type) | CObject | static |
ThrowUnassigned(TMemberIndex index) const | CSerialObject | |
ThrowUnassigned(TMemberIndex index, const char *file_name, int file_line) const | CSerialObject | |
TLockerType typedef | CObject | |
TmemberIndex typedef | CDbtag_Base | |
Tparent typedef | CDbtag | private |
TTag typedef | CDbtag_Base | |
UnassignedByte(void) | CSerialObject | inlinestatic |
UnassignedString(void) | CSerialObject | inlinestatic |
UnassignedStringUTF8(void) | CSerialObject | inlinestatic |
x_GetVerifyData(void) | CSerialObject | privatestatic |
x_LooksLikeAccession(const string &tag, int &out_num_alpha, int &out_num_digit, int &out_num_unscr) | CDbtag | privatestatic |
~CDbtag(void) | CDbtag | |
~CDbtag_Base(void) | CDbtag_Base | virtual |
~CDebugDumpable(void) | CDebugDumpable | virtual |
~CObject(void) | CObject | virtual |
~CSerialObject(void) | CSerialObject | virtual |