Represents ASN.1 type EMBL-block defined in file seqblock.asn

Search Toolkit Book for CEMBL_block_Base

#include <objects/seqblock/EMBL_block_.hpp>

Inheritance diagram for CEMBL_block_Base:

Collaboration diagram for CEMBL_block_Base:

Public Types
enum	EClass { eClass_not_set = 0 , eClass_standard = 1 , eClass_unannotated = 2 , eClass_other = 255 }

enum	EDiv { eDiv_fun = 0 , eDiv_inv = 1 , eDiv_mam = 2 , eDiv_org = 3 , eDiv_phg = 4 , eDiv_pln = 5 , eDiv_pri = 6 , eDiv_pro = 7 , eDiv_rod = 8 , eDiv_syn = 9 , eDiv_una = 10 , eDiv_vrl = 11 , eDiv_vrt = 12 , eDiv_pat = 13 , eDiv_est = 14 , eDiv_sts = 15 , eDiv_other = 255 }

enum class	E_memberIndex { e__allMandatory = 0 , e_class , e_div , e_creation_date , e_update_date , e_extra_acc , e_keywords , e_xref }

typedef EClass	TClass

typedef EDiv	TDiv

typedef CDate	TCreation_date

typedef CDate	TUpdate_date

typedef list< string >	TExtra_acc

typedef list< string >	TKeywords

typedef list< CRef< CEMBL_xref > >	TXref

typedef Tparent::CMemberIndex< E_memberIndex, 8 >	TmemberIndex

Public Types inherited from CObject
enum	EAllocFillMode { eAllocFillNone = 1 , eAllocFillZero , eAllocFillPattern }
	Control filling of newly allocated memory. More...

typedef CObjectCounterLocker	TLockerType
	Default locker type for CRef. More...

typedef atomic< Uint8 >	TCounter
	Counter type is CAtomiCounter. More...

typedef Uint8	TCount
	Alias for value type of counter. More...

Public Member Functions
	CEMBL_block_Base (void)

virtual	~CEMBL_block_Base (void)

	DECLARE_INTERNAL_TYPE_INFO ()

bool	IsSetClass (void) const
	Check if a value has been assigned to Class data member. More...

bool	CanGetClass (void) const
	Check if it is safe to call GetClass method. More...

void	ResetClass (void)
	Reset Class data member. More...

void	SetDefaultClass (void)
	Assign default value to Class data member. More...

TClass	GetClass (void) const
	Get the Class member data. More...

void	SetClass (TClass value)
	Assign a value to Class data member. More...

TClass &	SetClass (void)
	Assign a value to Class data member. More...

bool	IsSetDiv (void) const
	Check if a value has been assigned to Div data member. More...

bool	CanGetDiv (void) const
	Check if it is safe to call GetDiv method. More...

void	ResetDiv (void)
	Reset Div data member. More...

TDiv	GetDiv (void) const
	Get the Div member data. More...

void	SetDiv (TDiv value)
	Assign a value to Div data member. More...

TDiv &	SetDiv (void)
	Assign a value to Div data member. More...

bool	IsSetCreation_date (void) const
	Check if a value has been assigned to Creation_date data member. More...

bool	CanGetCreation_date (void) const
	Check if it is safe to call GetCreation_date method. More...

void	ResetCreation_date (void)
	Reset Creation_date data member. More...

const TCreation_date &	GetCreation_date (void) const
	Get the Creation_date member data. More...

void	SetCreation_date (TCreation_date &value)
	Assign a value to Creation_date data member. More...

TCreation_date &	SetCreation_date (void)
	Assign a value to Creation_date data member. More...

bool	IsSetUpdate_date (void) const
	Check if a value has been assigned to Update_date data member. More...

bool	CanGetUpdate_date (void) const
	Check if it is safe to call GetUpdate_date method. More...

void	ResetUpdate_date (void)
	Reset Update_date data member. More...

const TUpdate_date &	GetUpdate_date (void) const
	Get the Update_date member data. More...

void	SetUpdate_date (TUpdate_date &value)
	Assign a value to Update_date data member. More...

TUpdate_date &	SetUpdate_date (void)
	Assign a value to Update_date data member. More...

bool	IsSetExtra_acc (void) const
	Check if a value has been assigned to Extra_acc data member. More...

bool	CanGetExtra_acc (void) const
	Check if it is safe to call GetExtra_acc method. More...

void	ResetExtra_acc (void)
	Reset Extra_acc data member. More...

const TExtra_acc &	GetExtra_acc (void) const
	Get the Extra_acc member data. More...

TExtra_acc &	SetExtra_acc (void)
	Assign a value to Extra_acc data member. More...

bool	IsSetKeywords (void) const
	Check if a value has been assigned to Keywords data member. More...

bool	CanGetKeywords (void) const
	Check if it is safe to call GetKeywords method. More...

void	ResetKeywords (void)
	Reset Keywords data member. More...

const TKeywords &	GetKeywords (void) const
	Get the Keywords member data. More...

TKeywords &	SetKeywords (void)
	Assign a value to Keywords data member. More...

bool	IsSetXref (void) const
	Check if a value has been assigned to Xref data member. More...

bool	CanGetXref (void) const
	Check if it is safe to call GetXref method. More...

void	ResetXref (void)
	Reset Xref data member. More...

const TXref &	GetXref (void) const
	Get the Xref member data. More...

TXref &	SetXref (void)
	Assign a value to Xref data member. More...

virtual void	Reset (void)
	Reset the whole object. More...

Public Member Functions inherited from CSerialObject
	CSerialObject (void)

virtual	~CSerialObject (void)

virtual const CTypeInfo *	GetThisTypeInfo (void) const =0

virtual void	Assign (const CSerialObject &source, ESerialRecursionMode how=eRecursive)
	Set object to copy of another one. More...

virtual bool	Equals (const CSerialObject &object, ESerialRecursionMode how=eRecursive) const
	Check if both objects contain the same values. More...

virtual void	DebugDump (CDebugDumpContext ddc, unsigned int depth) const
	Define method for dumping debug information. More...

void	ThrowUnassigned (TMemberIndex index) const

void	ThrowUnassigned (TMemberIndex index, const char *file_name, int file_line) const

bool	HasNamespaceName (void) const
	Check if object data type has namespace name. More...

const string &	GetNamespaceName (void) const
	Get namespace name. More...

bool	HasNamespacePrefix (void) const
	Check if data type has namespace prefix. More...

const string &	GetNamespacePrefix (void) const
	Get namespace prefix. More...

Public Member Functions inherited from CObject
	CObject (void)
	Constructor. More...

	CObject (const CObject &src)
	Copy constructor. More...

virtual	~CObject (void)
	Destructor. More...

CObject &	operator= (const CObject &src) THROWS_NONE
	Assignment operator. More...

bool	CanBeDeleted (void) const THROWS_NONE
	Check if object can be deleted. More...

bool	IsAllocatedInPool (void) const THROWS_NONE
	Check if object is allocated in memory pool (not system heap) More...

bool	Referenced (void) const THROWS_NONE
	Check if object is referenced. More...

bool	ReferencedOnlyOnce (void) const THROWS_NONE
	Check if object is referenced only once. More...

void	AddReference (void) const
	Add reference to object. More...

void	RemoveReference (void) const
	Remove reference to object. More...

void	ReleaseReference (void) const
	Remove reference without deleting object. More...

virtual void	DoNotDeleteThisObject (void)
	Mark this object as not allocated in heap – do not delete this object. More...

virtual void	DoDeleteThisObject (void)
	Mark this object as allocated in heap – object can be deleted. More...

void *	operator new (size_t size)
	Define new operator for memory allocation. More...

void *	operator new[] (size_t size)
	Define new[] operator for 'array' memory allocation. More...

void	operator delete (void *ptr)
	Define delete operator for memory deallocation. More...

void	operator delete[] (void *ptr)
	Define delete[] operator for memory deallocation. More...

void *	operator new (size_t size, void *place)
	Define new operator. More...

void	operator delete (void ptr, void place)
	Define delete operator. More...

void *	operator new (size_t size, CObjectMemoryPool *place)
	Define new operator using memory pool. More...

void	operator delete (void ptr, CObjectMemoryPool place)
	Define delete operator. More...

Public Member Functions inherited from CDebugDumpable
	CDebugDumpable (void)

virtual	~CDebugDumpable (void)

void	DebugDumpText (ostream &out, const string &bundle, unsigned int depth) const

void	DebugDumpFormat (CDebugDumpFormatter &ddf, const string &bundle, unsigned int depth) const

void	DumpToConsole (void) const

Static Public Member Functions
static const NCBI_NS_NCBI::CEnumeratedTypeValues *ENUM_METHOD_NAME()	EClass (void)
	Access to EClass's attributes (values, names) as defined in spec. More...

static const NCBI_NS_NCBI::CEnumeratedTypeValues *ENUM_METHOD_NAME()	EDiv (void)
	Access to EDiv's attributes (values, names) as defined in spec. More...

Static Public Member Functions inherited from CSerialObject
static void	SetVerifyDataThread (ESerialVerifyData verify)

static void	SetVerifyDataGlobal (ESerialVerifyData verify)

static string	UnassignedString (void)

static CStringUTF8	UnassignedStringUTF8 (void)

static char	UnassignedByte (void)

Static Public Member Functions inherited from CObject
static NCBI_XNCBI_EXPORT void	ThrowNullPointerException (void)
	Define method to throw null pointer exception. More...

static NCBI_XNCBI_EXPORT void	ThrowNullPointerException (const type_info &type)

static EAllocFillMode	GetAllocFillMode (void)

static void	SetAllocFillMode (EAllocFillMode mode)

static void	SetAllocFillMode (const string &value)
	Set mode from configuration parameter value. More...

Static Public Member Functions inherited from CDebugDumpable
static void	EnableDebugDump (bool on)

Private Types
typedef CSerialObject	Tparent

Private Member Functions
	CEMBL_block_Base (const CEMBL_block_Base &)

CEMBL_block_Base &	operator= (const CEMBL_block_Base &)

Private Attributes
Uint4	m_set_State [1]

EClass	m_Class

EDiv	m_Div

CRef< TCreation_date >	m_Creation_date

CRef< TUpdate_date >	m_Update_date

list< string >	m_Extra_acc

list< string >	m_Keywords

list< CRef< CEMBL_xref > >	m_Xref

Additional Inherited Members
Static Public Attributes inherited from CSerialObject
static const char *	ms_UnassignedStr = "<unassigned>"

static const char	ms_UnassignedByte = char(0xcd)

Static Public Attributes inherited from CObject
static const TCount	eCounterBitsCanBeDeleted = 1 << 0
	Define possible object states. More...

static const TCount	eCounterBitsInPlainHeap = 1 << 1
	Heap signature was found. More...

static const TCount	eCounterBitsPlaceMask
	Mask for 'in heap' state flags. More...

static const int	eCounterStep = 1 << 2
	Skip over the "in heap" bits. More...

static const TCount	eCounterValid = TCount(1) << (sizeof(TCount) * 8 - 2)
	Minimal value for valid objects (reference counter is zero) Must be a single bit value. More...

static const TCount	eCounterStateMask
	Valid object, and object in heap. More...

Protected Member Functions inherited from CObject
virtual void	DeleteThis (void)
	Virtual method "deleting" this object. More...

Detailed Description

CEMBL_block_Base –.

Definition at line 78 of file EMBL_block_.hpp.

The documentation for this class was generated from the following files:

include/objects/seqblock/EMBL_block_.hpp
src/objects/seqblock/EMBL_block_.cpp

Public Types

Public Member Functions

Static Public Member Functions

Private Types

Private Member Functions

Private Attributes

Additional Inherited Members

Detailed Description