NCBI C++ ToolKit
CEditingActionFeatAnticodon Member List

This is the complete list of members for CEditingActionFeatAnticodon, including all inherited members.

Action(EActionType action)IEditingActionprotected
AddReference(void) constCObjectinline
Apply(const string &value)IEditingAction
CanBeDeleted(void) const THROWS_NONECObjectinline
CDebugDumpable(void)CDebugDumpableinline
CEditingActionFeatAnticodon(CSeq_entry_Handle seh, const CSeqFeatData::ESubtype subtype, const CSeqFeatData::E_Choice feat_type, const string &ncRNA_class)CEditingActionFeatAnticodon
CEditingActionFeatGbQual(CSeq_entry_Handle seh, const CSeqFeatData::ESubtype subtype, const CSeqFeatData::E_Choice feat_type, const string &ncRNA_class, const string &qual, const string &name="CEditingActionFeatGbQual")CEditingActionFeatGbQual
CheckForExistingText(CIRef< IEditingAction > action2, EActionType action_type, edit::CParseTextOptions parse_options=edit::CParseTextOptions())IEditingAction
CheckReferenceOverflow(TCount count) constCObjectprivate
CheckValue(void)IEditingAction
CheckValues(void)IEditingAction
CObject(void)CObject
CObject(const CObject &src)CObject
ConvertFrom(ECapChange cap_change, bool leave_on_original, const string &strip_name, IEditingAction *destination)IEditingAction
ConvertTo(const string &value, IEditingAction *source)IEditingAction
CopyFrom(IEditingAction *destination)IEditingAction
CopyTo(const string &value, IEditingAction *source)IEditingAction
DebugDump(CDebugDumpContext ddc, unsigned int depth) constCObjectvirtual
DebugDumpFormat(CDebugDumpFormatter &ddf, const string &bundle, unsigned int depth) constCDebugDumpable
DebugDumpText(ostream &out, const string &bundle, unsigned int depth) constCDebugDumpable
DeleteThis(void)CObjectprotectedvirtual
DoApply(void)IEditingActionprotected
DoConvertFrom(void)IEditingActionprotected
DoConvertTo(void)IEditingActionprotected
DoCopyFrom(void)IEditingActionprotected
DoCopyTo(void)IEditingActionprotected
DoDeleteThisObject(void)CObjectvirtual
DoEdit(void)IEditingActionprotected
DoNOOP(void)IEditingActionprotected
DoNotDeleteThisObject(void)CObjectvirtual
DoParseFrom(void)IEditingActionprotected
DoParseTo(void)IEditingActionprotected
DoRemove(void)IEditingActionprotected
DoRemoveOutside(void)IEditingActionprotected
DoSwapFrom(void)IEditingActionprotected
DoSwapTo(void)IEditingActionprotected
DumpToConsole(void) constCDebugDumpable
EActionType enum nameIEditingAction
eActionType_Apply enum valueIEditingAction
eActionType_ConvertFrom enum valueIEditingAction
eActionType_ConvertTo enum valueIEditingAction
eActionType_CopyFrom enum valueIEditingAction
eActionType_CopyTo enum valueIEditingAction
eActionType_Edit enum valueIEditingAction
eActionType_NOOP enum valueIEditingAction
eActionType_ParseFrom enum valueIEditingAction
eActionType_ParseTo enum valueIEditingAction
eActionType_Remove enum valueIEditingAction
eActionType_RemoveOutside enum valueIEditingAction
eActionType_SwapFrom enum valueIEditingAction
eActionType_SwapTo enum valueIEditingAction
EAllocFillMode enum nameCObject
eAllocFillNone enum valueCObject
eAllocFillPattern enum valueCObject
eAllocFillZero enum valueCObject
eCounterBitsCanBeDeletedCObjectstatic
eCounterBitsInPlainHeapCObjectstatic
eCounterBitsPlaceMaskCObjectstatic
eCounterStateMaskCObjectstatic
eCounterStepCObjectstatic
eCounterValidCObjectstatic
Edit(const string &find, const string &replace, macro::CMacroFunction_EditStringQual::ESearchLoc edit_loc, bool case_insensitive, bool is_regex)IEditingAction
EnableDebugDump(bool on)CDebugDumpablestatic
Find(EActionType action)IEditingActionFeatprotectedvirtual
FindFeatForAnotherFeat(EActionType action, SAnnotSelector other_selector)IEditingActionFeatprotected
FindOrCreateProtFeat(EActionType action)IEditingActionFeatprotected
FindRelated(EActionType action)IEditingActionFeatprotectedvirtual
FindRelatedFeatForAnotherFeat(EActionType action, SAnnotSelector other_selector)IEditingActionFeatprotected
FindRelatedOrCreateProtFeat(EActionType action)IEditingActionFeatprotected
GetActionCommand(void)IEditingAction
GetActionFeatSubtype()IEditingActionFeatinline
GetAllocFillMode(void)CObjectstatic
GetChangedDescriptors(void)IEditingAction
GetChangedFeatures(void)IEditingAction
GetChangedIds(void)IEditingAction
GetChangedInstances(void)IEditingAction
GetChangedSubmitBlock(void)IEditingAction
GetChangedValues(void)IEditingAction
GetContextForDescriptors(void)IEditingAction
GetCreatedDescriptors(void)IEditingAction
GetCreatedFeatures(void)IEditingAction
GetCurrentSeqEntryHandleFromFeatHandle(CSeq_feat_Handle fh)IEditingActionFeatprotected
GetDeletedDescriptors(void)IEditingAction
GetFeatHandle(void)IEditingActionFeat
GetIntervalString(const CSeq_interval &seq_int)CEditingActionFeatAnticodonprivate
GetName(void) constIEditingAction
GetRetranslateCdsCmd(const CSeq_feat_Handle fh, const CRef< CSeq_feat > feat, int &offset, bool create_general_only)IEditingActionprotected
GetSeqSubmit(void)IEditingAction
GetUpdateMRNAProductNameCmd(const CSeq_feat_Handle fh, const CRef< CSeq_feat > feat)IEditingActionprotected
GetValue(void)CEditingActionFeatAnticodonprotectedvirtual
GetValues(void)IEditingAction
GoToOrigFeature(void)IEditingActionFeatprotected
GoToProtFeature(void)IEditingActionFeatprotected
HandleValue(const string &value)IEditingActionprotected
IEditingAction(CSeq_entry_Handle seh, const string &name, CConstRef< objects::CSeq_submit > submit=CConstRef< objects::CSeq_submit >(NULL))IEditingAction
IEditingActionFeat(CSeq_entry_Handle seh, const CSeqFeatData::ESubtype subtype, const CSeqFeatData::E_Choice feat_type, const string &ncRNA_class, const string &name)IEditingActionFeat
InitCounter(void)CObjectinlineprivate
InvalidObject(void) constCObjectprivate
IsAllocatedInPool(void) const THROWS_NONECObjectinline
IsCreateNew(EActionType action)IEditingActionprotected
IsFrom(EActionType action)IEditingActionprotected
IsModified()IEditingActioninline
IsNOOP(EActionType action)IEditingActionprotected
IsSetValue(void)CEditingActionFeatAnticodonprotectedvirtual
IsTo(EActionType action)IEditingActionprotected
m_cap_changeIEditingActionprotected
m_case_insensitiveIEditingActionprotected
m_ChangedDescriptorsIEditingActionprotected
m_ChangedFeaturesIEditingActionprotected
m_ChangedIdsIEditingActionprotected
m_ChangedInstancesIEditingActionprotected
m_ChangedSubmitBlockIEditingActionprotected
m_ChangedValuesIEditingActionprotected
m_constraintIEditingActionprotected
m_ContextForDescriptorsIEditingActionprotected
m_CounterCObjectmutableprivate
m_CreatedDescriptorsIEditingActionprotected
m_CreatedFeaturesIEditingActionprotected
m_CurrentSeqEntryIEditingActionprotected
m_DeletedDescriptorsIEditingActionprotected
m_edit_locIEditingActionprotected
m_EditedFeatIEditingActionFeatprotected
m_eraseCEditingActionFeatGbQualprotected
m_existing_textIEditingActionprotected
m_FeatIEditingActionFeatprotected
m_findIEditingActionprotected
m_GBqualCEditingActionFeatGbQualprotected
m_is_regexIEditingActionprotected
m_leave_on_originalIEditingActionprotected
m_max_recordsIEditingActionprotected
m_modifiedIEditingActionprotected
m_NameIEditingActionprotected
m_ncRNAclassIEditingActionFeatprotected
m_OtherIEditingActionprotected
m_parse_optionsIEditingActionprotected
m_qualCEditingActionFeatGbQualprotected
m_remove_optionsIEditingActionprotected
m_replaceIEditingActionprotected
m_retranslate_cdsIEditingActionprotected
m_saved_feat_enabledIEditingActionFeatprotected
m_SavedEditedFeatIEditingActionFeatprotected
m_SavedFeatIEditingActionFeatprotected
m_scopeIEditingActionFeatprotected
m_selectorIEditingActionFeatprotected
m_SeqSubmitIEditingActionprotected
m_strip_nameIEditingActionprotected
m_TopSeqEntryIEditingActionprotected
m_update_mrnaIEditingActionprotected
m_valueIEditingActionprotected
MatchBioseqConstraintForFeatHandle(CSeq_feat_Handle fh)IEditingActionFeatprotected
Modify(EActionType action)CEditingActionFeatGbQualprotectedvirtual
NOOP(void)IEditingAction
ObjectStateCanBeDeleted(TCount count)CObjectinlineprivatestatic
ObjectStateIsAllocatedInPool(TCount count)CObjectinlineprivatestatic
ObjectStateReferenced(TCount count)CObjectinlineprivatestatic
ObjectStateReferencedOnlyOnce(TCount count)CObjectinlineprivatestatic
ObjectStateUnreferenced(TCount count)CObjectinlineprivatestatic
ObjectStateValid(TCount count)CObjectinlineprivatestatic
operator delete(void *ptr)CObject
operator delete(void *ptr, void *place)CObject
operator delete(void *ptr, CObjectMemoryPool *place)CObject
operator delete[](void *ptr)CObject
operator new(size_t size)CObject
operator new(size_t size, void *place)CObject
operator new(size_t size, CObjectMemoryPool *place)CObject
operator new[](size_t size)CObject
operator=(const CObject &src) THROWS_NONECObjectinline
OtherFeatIs(const CSeqFeatData::ESubtype subtype)IEditingActionFeatprotected
ParseFrom(edit::CParseTextOptions parse_options, IEditingAction *destination)IEditingAction
ParseTo(const string &value, IEditingAction *source)IEditingAction
Referenced(void) const THROWS_NONECObjectinline
ReferencedOnlyOnce(void) const THROWS_NONECObjectinline
ReleaseReference(void) constCObject
Remove(void)IEditingAction
RemoveGeneXref(void)IEditingActionFeatprotected
RemoveLastReference(TCount count) constCObjectprivate
RemoveOutside(CRef< macro::CRemoveTextOptions > options)IEditingAction
RemoveReference(void) constCObjectinline
ResetChangedDescriptors(void)IEditingAction
ResetChangedFeatures(void)IEditingAction
ResetChangedIds(void)IEditingAction
ResetChangedInstances(void)IEditingAction
ResetChangedValues(void)IEditingAction
ResetScope()IEditingActionFeatprotectedvirtual
ResetValue(void)CEditingActionFeatAnticodonprotectedvirtual
s_GetncRNAClass(const objects::CRNA_ref &rna_ref)IEditingActionFeatstatic
s_IsSetncRNAClass(const objects::CRNA_ref &rna_ref)IEditingActionFeatstatic
SameObject()IEditingActionFeatprotectedvirtual
SetAllocFillMode(EAllocFillMode mode)CObjectstatic
SetAllocFillMode(const string &value)CObjectstatic
SetConstraint(CRef< CEditingActionConstraint > constraint)IEditingAction
SetCurrentSeqEntry(CSeq_entry_Handle seh)IEditingAction
SetExistingText(edit::EExistingText existing_text)IEditingAction
SetFeat(CSeq_feat_Handle fh)IEditingActionFeatvirtual
SetFeatForAnotherFeat(CSeq_feat_Handle fh, const CSeqFeatData::ESubtype subtype)IEditingActionFeatprotected
SetMaxRecords(size_t max)IEditingActioninline
SetRetranslateCds(bool value)IEditingActioninline
SetTopSeqEntry(CSeq_entry_Handle seh)IEditingAction
SetUpdateMRNAProduct(bool value)IEditingActioninline
SetValue(const string &value)CEditingActionFeatAnticodonprotectedvirtual
sm_DumpEnabledCDebugDumpableprivatestatic
SwapContext(IEditingAction *source)IEditingActionFeatprotectedvirtual
SwapFrom(IEditingAction *destination)IEditingAction
SwapTo(const string &value, IEditingAction *source)IEditingAction
TCount typedefCObject
TCounter typedefCObject
ThrowNullPointerException(void)CObjectstatic
ThrowNullPointerException(const type_info &type)CObjectstatic
TLockerType typedefCObject
x_FindGeneForFeature(const CSeq_loc &loc, CScope &scope, CSeqFeatData::ESubtype subtype)IEditingActionFeat
x_GetSublocOnBioseq(CBioseq_Handle bsh, const CSeq_loc &loc)IEditingActionFeatprotected
x_MergeFeatureLocation(const CSeq_loc &loc, CScope &scope)IEditingActionFeatprotected
x_TestGeneForFeature(const CSeq_loc &gene_loc, const CSeq_loc &feat_loc, CScope &scope, bool &exact, TSeqPos &diff)IEditingActionFeatprotected
~CDebugDumpable(void)CDebugDumpablevirtual
~CObject(void)CObjectvirtual
~IEditingAction()IEditingActioninlinevirtual
Modified on Sun Mar 03 03:16:50 2024 by modify_doxy.py rev. 669887